© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|8235 |
| Gene name | |
| Location | Contig_523:14776..17223 |
| Strand | + |
| Gene length (bp) | 2447 |
| Transcript length (bp) | 2274 |
| Coding sequence length (bp) | 2274 |
| Protein length (aa) | 758 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1538 | 0.1519 | 0.9554 | 0.1205 | 0.0639 | 0.0087 | 0.2014 | 0.073 | 0.1195 | 0.0115 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 22 | 0.773943 |
| Orthofinder run ID | 4 |
| Orthogroup | 4085 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|8235 MRGQARLVAAVFLSLAVQRGRSGPLNWASQIVRRDDSSSNSPENQPLSSAASSEIIDGASSTSLEISPTVSAATA SVEYSVAPATSSIPLVVIPIDGKSSTVPDSTAALPTAGISSSSASTPATANSATEAVESTISSATDSAGPDSSSL EATSETQGAESSTSEVPESSAPSGALSTETASPEASHAATTHSNTALPSTVESVSSTKAESKAAVGNHTLSTASP SAGTSSDLALCYKSTSHSGEAQPAATSGPVQSNDDQFACSASVATRSGGSLDTAASSVAQTSSSISSTSLALCYK STSHSEEAQPAATSGPAQSNDDPYACSASAATQSGGFLETAASIVAQPSSSASILSASSAGFSNSSQSTAASALA SSSGVEVSAGSSISSPSAAIPGTTPVPLNGGSSSASPSNGTRAAVTISPSEASAGTTIYGGPVGDASTVALSSAP SSDSQSAASSAAVPPIPESPAPSPASSSTLSPLSSPSPSPPSTAAGSDAGPSSPSTAAPLQPTSAPAPPVPTENP SYPAAVSTVPPEVYAENLEQAKNLNQLYSSLKPQSACFGTQAACIEGKLARCRGGEYQLEPCQGDSRCLAFPMTN VQGVSIGCRSAKDAQSVLGGEHAGGPKSSSAAPAPAVPTTTQERPIASSHVVITFALYPHAGTVRSRVSAHGRGA AQLVSSGRPSGQYLAPGGGSASGIPDTASVRFPVSGPAHDVPGRQHGLESPRRRARTRERRRVGRGADADAGQGD VPGHHLE* |
| Coding | >Hirsu2|8235 ATGCGCGGCCAGGCTCGCCTCGTCGCCGCCGTCTTTCTCTCCCTGGCCGTGCAGCGTGGACGGTCCGGACCGCTG AACTGGGCCTCTCAAATAGTACGACGTGATGACAGCTCGTCTAATTCCCCAGAGAATCAGCCGCTTTCCTCGGCC GCTTCCAGTGAGATCATCGACGGCGCCTCGTCGACGAGTCTGGAGATTTCGCCCACCGTTTCCGCTGCTACGGCT TCAGTCGAATACAGTGTAGCACCAGCGACGTCTTCTATCCCCCTCGTCGTCATTCCCATCGACGGCAAGTCCTCA ACTGTGCCCGACAGCACGGCCGCGCTTCCCACAGCCGGCATATCCTCCTCTTCTGCCAGCACGCCTGCGACTGCG AATTCTGCAACGGAAGCTGTCGAGTCGACCATCTCTTCCGCCACGGACTCTGCCGGGCCGGATTCTTCCTCTTTG GAAGCAACCTCAGAGACGCAGGGTGCCGAGTCTTCAACTTCAGAGGTGCCGGAGTCGTCTGCGCCGTCAGGTGCC TTGTCCACAGAGACTGCGTCCCCCGAAGCCTCTCATGCCGCCACCACGCACTCGAATACAGCGCTCCCCAGCACA GTCGAATCTGTTTCGAGCACAAAAGCCGAGTCCAAGGCCGCGGTCGGCAACCACACTCTTTCCACAGCGTCGCCG TCTGCTGGTACATCCTCCGACCTCGCGCTTTGCTACAAGTCTACCAGTCATTCTGGAGAGGCCCAGCCAGCAGCA ACCAGTGGACCAGTACAGTCAAACGACGACCAATTTGCTTGCAGTGCTTCTGTGGCGACGCGAAGCGGTGGTTCT CTGGATACTGCGGCCAGCAGCGTCGCTCAGACGTCTTCCTCAATATCCTCCACAAGCCTTGCGCTTTGCTACAAG TCTACCAGCCACTCTGAAGAGGCCCAGCCGGCAGCAACCAGTGGACCGGCACAGTCAAATGACGACCCGTATGCT TGCAGTGCTTCTGCGGCGACGCAAAGCGGCGGTTTTTTGGAAACTGCGGCCAGCATCGTCGCTCAGCCGTCGTCC TCGGCATCCATCCTGAGTGCCTCGTCCGCGGGCTTTTCGAACTCTTCTCAGTCGACTGCGGCCTCGGCCCTTGCA AGTTCGAGCGGGGTTGAAGTGTCGGCTGGGTCTTCGATTTCGAGCCCCTCGGCAGCGATTCCGGGGACGACCCCG GTCCCTTTGAACGGAGGCTCCTCTTCGGCGTCACCTTCGAACGGTACCCGCGCTGCCGTGACCATCAGTCCATCT GAGGCTTCAGCAGGCACGACCATCTACGGGGGCCCCGTTGGCGACGCCTCGACCGTAGCACTTTCTTCAGCACCG TCTTCCGACTCCCAGAGCGCGGCCAGCTCGGCGGCTGTTCCTCCGATCCCAGAATCGCCCGCACCATCACCTGCC TCCTCGTCAACACTGTCGCCTCTTTCGTCGCCTTCGCCATCTCCTCCGTCGACCGCGGCAGGCTCTGATGCAGGG CCGTCAAGTCCGTCCACGGCAGCGCCCCTTCAACCGACGAGCGCACCTGCTCCCCCCGTGCCGACGGAAAACCCC AGCTACCCTGCCGCTGTTTCGACCGTGCCACCAGAGGTATACGCGGAGAACCTCGAACAGGCTAAGAACCTCAAC CAGCTCTATTCGAGCTTGAAACCGCAGTCGGCCTGCTTCGGCACGCAGGCGGCGTGTATCGAGGGTAAGCTTGCC CGCTGCAGGGGTGGCGAATACCAGCTTGAGCCATGCCAAGGGGACTCGCGATGCCTGGCCTTCCCCATGACCAAC GTGCAGGGCGTGTCCATCGGGTGCAGGAGCGCCAAGGATGCGCAGAGCGTTCTCGGTGGAGAACACGCCGGTGGA CCCAAGAGCAGCAGCGCAGCGCCGGCACCGGCTGTACCGACCACGACCCAAGAGAGACCCATCGCAAGCAGCCAC GTCGTCATCACCTTCGCGCTATACCCTCACGCCGGTACAGTCCGCTCTCGAGTCTCAGCCCACGGCCGCGGCGCC GCCCAGCTCGTCAGCAGCGGAAGGCCCTCGGGTCAATACCTCGCCCCCGGCGGTGGCTCCGCCTCCGGCATCCCT GACACTGCCTCCGTCCGATTCCCAGTCAGTGGCCCTGCTCACGACGTACCCGGTCGTCAGCATGGCCTCGAGTCT CCCCGCCGGCGAGCCCGGACACGGGAGCGTCGTCGAGTCGGTCGAGGGGCCGACGCCGACGCTGGCCAGGGCGAC GTACCCGGCCATCACCTCGAGTGA |
| Transcript | >Hirsu2|8235 ATGCGCGGCCAGGCTCGCCTCGTCGCCGCCGTCTTTCTCTCCCTGGCCGTGCAGCGTGGACGGTCCGGACCGCTG AACTGGGCCTCTCAAATAGTACGACGTGATGACAGCTCGTCTAATTCCCCAGAGAATCAGCCGCTTTCCTCGGCC GCTTCCAGTGAGATCATCGACGGCGCCTCGTCGACGAGTCTGGAGATTTCGCCCACCGTTTCCGCTGCTACGGCT TCAGTCGAATACAGTGTAGCACCAGCGACGTCTTCTATCCCCCTCGTCGTCATTCCCATCGACGGCAAGTCCTCA ACTGTGCCCGACAGCACGGCCGCGCTTCCCACAGCCGGCATATCCTCCTCTTCTGCCAGCACGCCTGCGACTGCG AATTCTGCAACGGAAGCTGTCGAGTCGACCATCTCTTCCGCCACGGACTCTGCCGGGCCGGATTCTTCCTCTTTG GAAGCAACCTCAGAGACGCAGGGTGCCGAGTCTTCAACTTCAGAGGTGCCGGAGTCGTCTGCGCCGTCAGGTGCC TTGTCCACAGAGACTGCGTCCCCCGAAGCCTCTCATGCCGCCACCACGCACTCGAATACAGCGCTCCCCAGCACA GTCGAATCTGTTTCGAGCACAAAAGCCGAGTCCAAGGCCGCGGTCGGCAACCACACTCTTTCCACAGCGTCGCCG TCTGCTGGTACATCCTCCGACCTCGCGCTTTGCTACAAGTCTACCAGTCATTCTGGAGAGGCCCAGCCAGCAGCA ACCAGTGGACCAGTACAGTCAAACGACGACCAATTTGCTTGCAGTGCTTCTGTGGCGACGCGAAGCGGTGGTTCT CTGGATACTGCGGCCAGCAGCGTCGCTCAGACGTCTTCCTCAATATCCTCCACAAGCCTTGCGCTTTGCTACAAG TCTACCAGCCACTCTGAAGAGGCCCAGCCGGCAGCAACCAGTGGACCGGCACAGTCAAATGACGACCCGTATGCT TGCAGTGCTTCTGCGGCGACGCAAAGCGGCGGTTTTTTGGAAACTGCGGCCAGCATCGTCGCTCAGCCGTCGTCC TCGGCATCCATCCTGAGTGCCTCGTCCGCGGGCTTTTCGAACTCTTCTCAGTCGACTGCGGCCTCGGCCCTTGCA AGTTCGAGCGGGGTTGAAGTGTCGGCTGGGTCTTCGATTTCGAGCCCCTCGGCAGCGATTCCGGGGACGACCCCG GTCCCTTTGAACGGAGGCTCCTCTTCGGCGTCACCTTCGAACGGTACCCGCGCTGCCGTGACCATCAGTCCATCT GAGGCTTCAGCAGGCACGACCATCTACGGGGGCCCCGTTGGCGACGCCTCGACCGTAGCACTTTCTTCAGCACCG TCTTCCGACTCCCAGAGCGCGGCCAGCTCGGCGGCTGTTCCTCCGATCCCAGAATCGCCCGCACCATCACCTGCC TCCTCGTCAACACTGTCGCCTCTTTCGTCGCCTTCGCCATCTCCTCCGTCGACCGCGGCAGGCTCTGATGCAGGG CCGTCAAGTCCGTCCACGGCAGCGCCCCTTCAACCGACGAGCGCACCTGCTCCCCCCGTGCCGACGGAAAACCCC AGCTACCCTGCCGCTGTTTCGACCGTGCCACCAGAGGTATACGCGGAGAACCTCGAACAGGCTAAGAACCTCAAC CAGCTCTATTCGAGCTTGAAACCGCAGTCGGCCTGCTTCGGCACGCAGGCGGCGTGTATCGAGGGTAAGCTTGCC CGCTGCAGGGGTGGCGAATACCAGCTTGAGCCATGCCAAGGGGACTCGCGATGCCTGGCCTTCCCCATGACCAAC GTGCAGGGCGTGTCCATCGGGTGCAGGAGCGCCAAGGATGCGCAGAGCGTTCTCGGTGGAGAACACGCCGGTGGA CCCAAGAGCAGCAGCGCAGCGCCGGCACCGGCTGTACCGACCACGACCCAAGAGAGACCCATCGCAAGCAGCCAC GTCGTCATCACCTTCGCGCTATACCCTCACGCCGGTACAGTCCGCTCTCGAGTCTCAGCCCACGGCCGCGGCGCC GCCCAGCTCGTCAGCAGCGGAAGGCCCTCGGGTCAATACCTCGCCCCCGGCGGTGGCTCCGCCTCCGGCATCCCT GACACTGCCTCCGTCCGATTCCCAGTCAGTGGCCCTGCTCACGACGTACCCGGTCGTCAGCATGGCCTCGAGTCT CCCCGCCGGCGAGCCCGGACACGGGAGCGTCGTCGAGTCGGTCGAGGGGCCGACGCCGACGCTGGCCAGGGCGAC GTACCCGGCCATCACCTCGAGTGA |
| Gene | >Hirsu2|8235 ATGCGCGGCCAGGCTCGCCTCGTCGCCGCCGTCTTTCTCTCCCTGGCCGTGCAGCGTGGACGGTCCGGACCGCTG AACTGGGCCTCTCAAATGTCGGTGCTGGCTTTCGATTTGTTCTCGGGATCCTCGGCAGCGGCTAACACGCCGAGA TCTTAGAGTACGACGTGATGACAGCTCGTCTAATTCCCCAGAGAATCAGCCGCTTTCCTCGGCCGCTTCCAGGTA TGATTCGCCCGCTCTGACGATCCCGGCATGCCGACGGCTCACGGCTCTGCAAGCTTAAGTGAGATCATCGACGGC GCCTCGTCGACGAGTCTGGAGATTTCGCCCACCGTTTCCGCTGCTACGGCTTCAGTCGAATACAGTGTAGCACCA GCGACGTCTTCTATCCCCCTCGTCGTCATTCCCATCGACGGCAAGTCCTCAACTGTGCCCGACAGCACGGCCGCG CTTCCCACAGCCGGCATATCCTCCTCTTCTGCCAGCACGCCTGCGACTGCGAATTCTGCAACGGAAGCTGTCGAG TCGACCATCTCTTCCGCCACGGACTCTGCCGGGCCGGATTCTTCCTCTTTGGAAGCAACCTCAGAGACGCAGGGT GCCGAGTCTTCAACTTCAGAGGTGCCGGAGTCGTCTGCGCCGTCAGGTGCCTTGTCCACAGAGACTGCGTCCCCC GAAGCCTCTCATGCCGCCACCACGCACTCGAATACAGCGCTCCCCAGCACAGTCGAATCTGTTTCGAGCACAAAA GCCGAGTCCAAGGCCGCGGTCGGCAACCACACTCTTTCCACAGCGTCGCCGTCTGCTGGTACATCCTCCGACCTC GCGCTTTGCTACAAGTCTACCAGTCATTCTGGAGAGGCCCAGCCAGCAGCAACCAGTGGACCAGTACAGTCAAAC GACGACCAATTTGCTTGCAGTGCTTCTGTGGCGACGCGAAGCGGTGGTTCTCTGGATACTGCGGCCAGCAGCGTC GCTCAGACGTCTTCCTCAATATCCTCCACAAGCCTTGCGCTTTGCTACAAGTCTACCAGCCACTCTGAAGAGGCC CAGCCGGCAGCAACCAGTGGACCGGCACAGTCAAATGACGACCCGTATGCTTGCAGTGCTTCTGCGGCGACGCAA AGCGGCGGTTTTTTGGAAACTGCGGCCAGCATCGTCGCTCAGCCGTCGTCCTCGGCATCCATCCTGAGTGCCTCG TCCGCGGGCTTTTCGAACTCTTCTCAGTCGACTGCGGCCTCGGCCCTTGCAAGTTCGAGCGGGGTTGAAGTGTCG GCTGGGTCTTCGATTTCGAGCCCCTCGGCAGCGATTCCGGGGACGACCCCGGTCCCTTTGAACGGAGGCTCCTCT TCGGCGTCACCTTCGAACGGTACCCGCGCTGCCGTGACCATCAGTCCATCTGAGGCTTCAGCAGGCACGACCATC TACGGGGGCCCCGTTGGCGACGCCTCGACCGTAGCACTTTCTTCAGCACCGTCTTCCGACTCCCAGAGCGCGGCC AGCTCGGCGGCTGTTCCTCCGATCCCAGAATCGCCCGCACCATCACCTGCCTCCTCGTCAACACTGTCGCCTCTT TCGTCGCCTTCGCCATCTCCTCCGTCGACCGCGGCAGGCTCTGATGCAGGGCCGTCAAGTCCGTCCACGGCAGCG CCCCTTCAACCGACGAGCGCACCTGCTCCCCCCGTGCCGACGGAAAACCCCAGCTACCCTGCCGCTGTTTCGACC GTGCCACCAGAGGTATACGCGGAGAACCTCGAACAGGCTAAGAACCTCAACCAGCTCTATTCGAGCTTGAAACCG CAGTCGGCCTGCTTCGGCACGCAGGCGGCGTGTATCGAGGGTAAGCTTGCCCGCTGCAGGGGTGGCGAATACCAG CTTGAGCCATGCCAAGGGGACTCGCGATGCCTGGCCTTCCCCATGACCAACGTGCAGGGCGTGTCCATCGGGTGC AGGAGCGCCAAGGATGCGCAGAGCGTTCTCGGTGGAGAACACGCCGGTGGACCCAAGAGCAGCAGCGCAGCGCCG GCACCGGCTGTACCGACCACGACCCAAGAGAGAGTGCGGCCGGTCGTGACGATGACGACAGTGGTCACCGTCGTT GACAGCCCATCGCAAGCAGCCACGTCGTCATCACCTTCGCGCTATACCCTCACGCCGGTACAGTCCGCTCTCGAG TCTCAGCCCACGGCCGCGGCGCCGCCCAGCTCGTCAGCAGCGGAAGGCCCTCGGGTCAATACCTCGCCCCCGGCG GTGGCTCCGCCTCCGGCATCCCTGACACTGCCTCCGTCCGATTCCCAGTCAGTGGCCCTGCTCACGACGTACCCG GTCGTCAGCATGGCCTCGAGTCTCCCCGCCGGCGAGCCCGGACACGGGAGCGTCGTCGAGTCGGTCGAGGGGCCG ACGCCGACGCTGGCCAGGGCGACGTACCCGGCCATCACCTCGAGTGA |