Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8232
Gene name
LocationContig_523:6644..7325
Strand+
Gene length (bp)681
Transcript length (bp)612
Coding sequence length (bp)612
Protein length (aa) 204

Overview

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O13689|YDYA_SCHPO Uncharacterized protein C11E3.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11E3.10 PE=4 SV=2 3 132 8.0E-24

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Endoplasmic reticulum Signal peptide|Transmembrane domain 0.112 0.2758 0.1042 0.1294 0.1492 0.0008 0.7225 0.3593 0.4167 0.0347

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 7 26 19
2 36 53 17
3 60 79 19
4 94 111 17

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4082
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6848
Ophiocordyceps australis map64 (Brazil) OphauB2|4534
Ophiocordyceps camponoti-floridani Ophcf2|03146
Ophiocordyceps camponoti-rufipedis Ophun1|163
Ophiocordyceps kimflemingae Ophio5|6639
Ophiocordyceps subramaniannii Hirsu2|8232 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8232
MRVRLPFAGFFLLLLFLAAYAGLTTFRAGQYVNDKVLHVLTFFLLTAVFYWIVDTNRRRTVNMTLVVCTLILGVG
SEFVQSFLPNDRDFDMYDIVANLVGSLAALGLCSWYHRRMLERRRKRKSYHPVPGEDGTDVELGQDHETGIVEGP
SQPRTLEEEVDNWDENAADDWDGDVGVAPSSPQAAKAKIPESHDIGDTKKRSD*
Coding >Hirsu2|8232
ATGCGCGTTCGCCTGCCGTTCGCCGGCTTCTTCCTACTGCTCCTGTTCCTCGCCGCCTATGCCGGGCTCACGACC
TTCCGTGCGGGCCAGTATGTCAACGACAAGGTCCTGCACGTCCTGACTTTTTTCCTCCTCACCGCCGTCTTCTAC
TGGATCGTCGATACGAACCGCCGGCGCACCGTCAACATGACACTCGTCGTCTGTACCCTCATCTTGGGTGTGGGC
TCCGAATTCGTCCAAAGCTTCCTTCCAAACGATCGCGACTTCGACATGTACGATATTGTGGCCAACCTTGTGGGA
AGCCTTGCAGCTCTGGGTCTCTGTTCCTGGTACCATCGGCGCATGCTCGAGCGGCGAAGGAAGCGCAAGTCGTAC
CACCCGGTTCCGGGGGAAGACGGCACAGACGTTGAGCTCGGCCAAGACCACGAGACGGGAATAGTCGAGGGTCCA
TCTCAGCCGAGGACGTTGGAGGAGGAGGTGGACAACTGGGACGAGAACGCGGCTGACGATTGGGATGGCGATGTT
GGCGTCGCTCCATCCTCACCTCAAGCCGCCAAGGCCAAGATCCCAGAGAGCCATGATATCGGGGACACCAAGAAA
CGGTCAGACTGA
Transcript >Hirsu2|8232
ATGCGCGTTCGCCTGCCGTTCGCCGGCTTCTTCCTACTGCTCCTGTTCCTCGCCGCCTATGCCGGGCTCACGACC
TTCCGTGCGGGCCAGTATGTCAACGACAAGGTCCTGCACGTCCTGACTTTTTTCCTCCTCACCGCCGTCTTCTAC
TGGATCGTCGATACGAACCGCCGGCGCACCGTCAACATGACACTCGTCGTCTGTACCCTCATCTTGGGTGTGGGC
TCCGAATTCGTCCAAAGCTTCCTTCCAAACGATCGCGACTTCGACATGTACGATATTGTGGCCAACCTTGTGGGA
AGCCTTGCAGCTCTGGGTCTCTGTTCCTGGTACCATCGGCGCATGCTCGAGCGGCGAAGGAAGCGCAAGTCGTAC
CACCCGGTTCCGGGGGAAGACGGCACAGACGTTGAGCTCGGCCAAGACCACGAGACGGGAATAGTCGAGGGTCCA
TCTCAGCCGAGGACGTTGGAGGAGGAGGTGGACAACTGGGACGAGAACGCGGCTGACGATTGGGATGGCGATGTT
GGCGTCGCTCCATCCTCACCTCAAGCCGCCAAGGCCAAGATCCCAGAGAGCCATGATATCGGGGACACCAAGAAA
CGGTCAGACTGA
Gene >Hirsu2|8232
ATGCGCGTTCGCCTGCCGTTCGCCGGTGAGTTCCGCAATCATGGCCGCGTGTTGGGAACTGATAATTGGCCTTGC
TGATCGCTTCCGCTACCAGGCTTCTTCCTACTGCTCCTGTTCCTCGCCGCCTATGCCGGGCTCACGACCTTCCGT
GCGGGCCAGTATGTCAACGACAAGGTCCTGCACGTCCTGACTTTTTTCCTCCTCACCGCCGTCTTCTACTGGATC
GTCGATACGAACCGCCGGCGCACCGTCAACATGACACTCGTCGTCTGTACCCTCATCTTGGGTGTGGGCTCCGAA
TTCGTCCAAAGCTTCCTTCCAAACGATCGCGACTTCGACATGTACGATATTGTGGCCAACCTTGTGGGAAGCCTT
GCAGCTCTGGGTCTCTGTTCCTGGTACCATCGGCGCATGCTCGAGCGGCGAAGGAAGCGCAAGTCGTACCACCCG
GTTCCGGGGGAAGACGGCACAGACGTTGAGCTCGGCCAAGACCACGAGACGGGAATAGTCGAGGGTCCATCTCAG
CCGAGGACGTTGGAGGAGGAGGTGGACAACTGGGACGAGAACGCGGCTGACGATTGGGATGGCGATGTTGGCGTC
GCTCCATCCTCACCTCAAGCCGCCAAGGCCAAGATCCCAGAGAGCCATGATATCGGGGACACCAAGAAACGGTCA
GACTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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