Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|8232
Gene name
Location	Contig_523:6644..7325
Strand	+
Gene length (bp)	681
Transcript length (bp)	612
Coding sequence length (bp)	612
Protein length (aa)	204

PFAM Domains

(None)

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|O13689\|YDYA_SCHPO	Uncharacterized protein C11E3.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11E3.10 PE=4 SV=2	3	132	8.0E-24

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 22	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	7	26	19
2	36	53	17
3	60	79	19
4	94	111	17

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|8232 MRVRLPFAGFFLLLLFLAAYAGLTTFRAGQYVNDKVLHVLTFFLLTAVFYWIVDTNRRRTVNMTLVVCTLILGVG SEFVQSFLPNDRDFDMYDIVANLVGSLAALGLCSWYHRRMLERRRKRKSYHPVPGEDGTDVELGQDHETGIVEGP SQPRTLEEEVDNWDENAADDWDGDVGVAPSSPQAAKAKIPESHDIGDTKKRSD*
Coding	>Hirsu2\|8232 ATGCGCGTTCGCCTGCCGTTCGCCGGCTTCTTCCTACTGCTCCTGTTCCTCGCCGCCTATGCCGGGCTCACGACC TTCCGTGCGGGCCAGTATGTCAACGACAAGGTCCTGCACGTCCTGACTTTTTTCCTCCTCACCGCCGTCTTCTAC TGGATCGTCGATACGAACCGCCGGCGCACCGTCAACATGACACTCGTCGTCTGTACCCTCATCTTGGGTGTGGGC TCCGAATTCGTCCAAAGCTTCCTTCCAAACGATCGCGACTTCGACATGTACGATATTGTGGCCAACCTTGTGGGA AGCCTTGCAGCTCTGGGTCTCTGTTCCTGGTACCATCGGCGCATGCTCGAGCGGCGAAGGAAGCGCAAGTCGTAC CACCCGGTTCCGGGGGAAGACGGCACAGACGTTGAGCTCGGCCAAGACCACGAGACGGGAATAGTCGAGGGTCCA TCTCAGCCGAGGACGTTGGAGGAGGAGGTGGACAACTGGGACGAGAACGCGGCTGACGATTGGGATGGCGATGTT GGCGTCGCTCCATCCTCACCTCAAGCCGCCAAGGCCAAGATCCCAGAGAGCCATGATATCGGGGACACCAAGAAA CGGTCAGACTGA
Transcript	>Hirsu2\|8232 ATGCGCGTTCGCCTGCCGTTCGCCGGCTTCTTCCTACTGCTCCTGTTCCTCGCCGCCTATGCCGGGCTCACGACC TTCCGTGCGGGCCAGTATGTCAACGACAAGGTCCTGCACGTCCTGACTTTTTTCCTCCTCACCGCCGTCTTCTAC TGGATCGTCGATACGAACCGCCGGCGCACCGTCAACATGACACTCGTCGTCTGTACCCTCATCTTGGGTGTGGGC TCCGAATTCGTCCAAAGCTTCCTTCCAAACGATCGCGACTTCGACATGTACGATATTGTGGCCAACCTTGTGGGA AGCCTTGCAGCTCTGGGTCTCTGTTCCTGGTACCATCGGCGCATGCTCGAGCGGCGAAGGAAGCGCAAGTCGTAC CACCCGGTTCCGGGGGAAGACGGCACAGACGTTGAGCTCGGCCAAGACCACGAGACGGGAATAGTCGAGGGTCCA TCTCAGCCGAGGACGTTGGAGGAGGAGGTGGACAACTGGGACGAGAACGCGGCTGACGATTGGGATGGCGATGTT GGCGTCGCTCCATCCTCACCTCAAGCCGCCAAGGCCAAGATCCCAGAGAGCCATGATATCGGGGACACCAAGAAA CGGTCAGACTGA
Gene	>Hirsu2\|8232 ATGCGCGTTCGCCTGCCGTTCGCCGGTGAGTTCCGCAATCATGGCCGCGTGTTGGGAACTGATAATTGGCCTTGC TGATCGCTTCCGCTACCAGGCTTCTTCCTACTGCTCCTGTTCCTCGCCGCCTATGCCGGGCTCACGACCTTCCGT GCGGGCCAGTATGTCAACGACAAGGTCCTGCACGTCCTGACTTTTTTCCTCCTCACCGCCGTCTTCTACTGGATC GTCGATACGAACCGCCGGCGCACCGTCAACATGACACTCGTCGTCTGTACCCTCATCTTGGGTGTGGGCTCCGAA TTCGTCCAAAGCTTCCTTCCAAACGATCGCGACTTCGACATGTACGATATTGTGGCCAACCTTGTGGGAAGCCTT GCAGCTCTGGGTCTCTGTTCCTGGTACCATCGGCGCATGCTCGAGCGGCGAAGGAAGCGCAAGTCGTACCACCCG GTTCCGGGGGAAGACGGCACAGACGTTGAGCTCGGCCAAGACCACGAGACGGGAATAGTCGAGGGTCCATCTCAG CCGAGGACGTTGGAGGAGGAGGTGGACAACTGGGACGAGAACGCGGCTGACGATTGGGATGGCGATGTTGGCGTC GCTCCATCCTCACCTCAAGCCGCCAAGGCCAAGATCCCAGAGAGCCATGATATCGGGGACACCAAGAAACGGTCA GACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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