Protein ID | Hirsu2|8232 |
Gene name | |
Location | Contig_523:6644..7325 |
Strand | + |
Gene length (bp) | 681 |
Transcript length (bp) | 612 |
Coding sequence length (bp) | 612 |
Protein length (aa) | 204 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O13689|YDYA_SCHPO | Uncharacterized protein C11E3.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11E3.10 PE=4 SV=2 | 3 | 132 | 8.0E-24 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Endoplasmic reticulum | Signal peptide|Transmembrane domain | 0.112 | 0.2758 | 0.1042 | 0.1294 | 0.1492 | 0.0008 | 0.7225 | 0.3593 | 0.4167 | 0.0347 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 26 | 19 |
2 | 36 | 53 | 17 |
3 | 60 | 79 | 19 |
4 | 94 | 111 | 17 |
Orthofinder run ID | 4 |
Orthogroup | 4082 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|8232 MRVRLPFAGFFLLLLFLAAYAGLTTFRAGQYVNDKVLHVLTFFLLTAVFYWIVDTNRRRTVNMTLVVCTLILGVG SEFVQSFLPNDRDFDMYDIVANLVGSLAALGLCSWYHRRMLERRRKRKSYHPVPGEDGTDVELGQDHETGIVEGP SQPRTLEEEVDNWDENAADDWDGDVGVAPSSPQAAKAKIPESHDIGDTKKRSD* |
Coding | >Hirsu2|8232 ATGCGCGTTCGCCTGCCGTTCGCCGGCTTCTTCCTACTGCTCCTGTTCCTCGCCGCCTATGCCGGGCTCACGACC TTCCGTGCGGGCCAGTATGTCAACGACAAGGTCCTGCACGTCCTGACTTTTTTCCTCCTCACCGCCGTCTTCTAC TGGATCGTCGATACGAACCGCCGGCGCACCGTCAACATGACACTCGTCGTCTGTACCCTCATCTTGGGTGTGGGC TCCGAATTCGTCCAAAGCTTCCTTCCAAACGATCGCGACTTCGACATGTACGATATTGTGGCCAACCTTGTGGGA AGCCTTGCAGCTCTGGGTCTCTGTTCCTGGTACCATCGGCGCATGCTCGAGCGGCGAAGGAAGCGCAAGTCGTAC CACCCGGTTCCGGGGGAAGACGGCACAGACGTTGAGCTCGGCCAAGACCACGAGACGGGAATAGTCGAGGGTCCA TCTCAGCCGAGGACGTTGGAGGAGGAGGTGGACAACTGGGACGAGAACGCGGCTGACGATTGGGATGGCGATGTT GGCGTCGCTCCATCCTCACCTCAAGCCGCCAAGGCCAAGATCCCAGAGAGCCATGATATCGGGGACACCAAGAAA CGGTCAGACTGA |
Transcript | >Hirsu2|8232 ATGCGCGTTCGCCTGCCGTTCGCCGGCTTCTTCCTACTGCTCCTGTTCCTCGCCGCCTATGCCGGGCTCACGACC TTCCGTGCGGGCCAGTATGTCAACGACAAGGTCCTGCACGTCCTGACTTTTTTCCTCCTCACCGCCGTCTTCTAC TGGATCGTCGATACGAACCGCCGGCGCACCGTCAACATGACACTCGTCGTCTGTACCCTCATCTTGGGTGTGGGC TCCGAATTCGTCCAAAGCTTCCTTCCAAACGATCGCGACTTCGACATGTACGATATTGTGGCCAACCTTGTGGGA AGCCTTGCAGCTCTGGGTCTCTGTTCCTGGTACCATCGGCGCATGCTCGAGCGGCGAAGGAAGCGCAAGTCGTAC CACCCGGTTCCGGGGGAAGACGGCACAGACGTTGAGCTCGGCCAAGACCACGAGACGGGAATAGTCGAGGGTCCA TCTCAGCCGAGGACGTTGGAGGAGGAGGTGGACAACTGGGACGAGAACGCGGCTGACGATTGGGATGGCGATGTT GGCGTCGCTCCATCCTCACCTCAAGCCGCCAAGGCCAAGATCCCAGAGAGCCATGATATCGGGGACACCAAGAAA CGGTCAGACTGA |
Gene | >Hirsu2|8232 ATGCGCGTTCGCCTGCCGTTCGCCGGTGAGTTCCGCAATCATGGCCGCGTGTTGGGAACTGATAATTGGCCTTGC TGATCGCTTCCGCTACCAGGCTTCTTCCTACTGCTCCTGTTCCTCGCCGCCTATGCCGGGCTCACGACCTTCCGT GCGGGCCAGTATGTCAACGACAAGGTCCTGCACGTCCTGACTTTTTTCCTCCTCACCGCCGTCTTCTACTGGATC GTCGATACGAACCGCCGGCGCACCGTCAACATGACACTCGTCGTCTGTACCCTCATCTTGGGTGTGGGCTCCGAA TTCGTCCAAAGCTTCCTTCCAAACGATCGCGACTTCGACATGTACGATATTGTGGCCAACCTTGTGGGAAGCCTT GCAGCTCTGGGTCTCTGTTCCTGGTACCATCGGCGCATGCTCGAGCGGCGAAGGAAGCGCAAGTCGTACCACCCG GTTCCGGGGGAAGACGGCACAGACGTTGAGCTCGGCCAAGACCACGAGACGGGAATAGTCGAGGGTCCATCTCAG CCGAGGACGTTGGAGGAGGAGGTGGACAACTGGGACGAGAACGCGGCTGACGATTGGGATGGCGATGTTGGCGTC GCTCCATCCTCACCTCAAGCCGCCAAGGCCAAGATCCCAGAGAGCCATGATATCGGGGACACCAAGAAACGGTCA GACTGA |