Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8215
Gene name
LocationContig_52:48091..49393
Strand+
Gene length (bp)1302
Transcript length (bp)1302
Coding sequence length (bp)1302
Protein length (aa) 434

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00076 RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 4.9E-16 290 359

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q10355|YDB2_SCHPO Uncharacterized RNA-binding protein C22E12.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC22E12.02 PE=3 SV=1 263 377 1.0E-32
sp|A2VDB3|RBM42_XENLA RNA-binding protein 42 OS=Xenopus laevis GN=rbm42 PE=2 SV=1 266 378 1.0E-29
sp|Q0P5L0|RBM42_BOVIN RNA-binding protein 42 OS=Bos taurus GN=RBM42 PE=2 SV=1 266 364 1.0E-28
sp|Q9BTD8|RBM42_HUMAN RNA-binding protein 42 OS=Homo sapiens GN=RBM42 PE=1 SV=1 266 364 2.0E-28
sp|Q66KL9|RBM42_XENTR RNA-binding protein 42 OS=Xenopus tropicalis GN=rbm42 PE=2 SV=1 266 378 2.0E-28
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q10355|YDB2_SCHPO Uncharacterized RNA-binding protein C22E12.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC22E12.02 PE=3 SV=1 263 377 1.0E-32
sp|A2VDB3|RBM42_XENLA RNA-binding protein 42 OS=Xenopus laevis GN=rbm42 PE=2 SV=1 266 378 1.0E-29
sp|Q0P5L0|RBM42_BOVIN RNA-binding protein 42 OS=Bos taurus GN=RBM42 PE=2 SV=1 266 364 1.0E-28
sp|Q9BTD8|RBM42_HUMAN RNA-binding protein 42 OS=Homo sapiens GN=RBM42 PE=1 SV=1 266 364 2.0E-28
sp|Q66KL9|RBM42_XENTR RNA-binding protein 42 OS=Xenopus tropicalis GN=rbm42 PE=2 SV=1 266 378 2.0E-28
sp|Q6AXT7|RBM42_RAT RNA-binding protein 42 OS=Rattus norvegicus GN=Rbm42 PE=1 SV=1 266 364 3.0E-28
sp|Q91V81|RBM42_MOUSE RNA-binding protein 42 OS=Mus musculus GN=Rbm42 PE=1 SV=1 266 364 3.0E-28
sp|Q6DRG1|RBM42_DANRE RNA-binding protein 42 OS=Danio rerio GN=rbm42 PE=2 SV=2 266 378 6.0E-28
sp|Q9LJH8|UBP1C_ARATH Oligouridylate-binding protein 1C OS=Arabidopsis thaliana GN=UBP1C PE=1 SV=1 286 359 2.0E-12
sp|Q9SYG4|UBP1A_ARATH Oligouridylate-binding protein 1A OS=Arabidopsis thaliana GN=UBP1A PE=1 SV=1 286 359 2.0E-12
sp|Q93W34|RP45C_ARATH Polyadenylate-binding protein RBP45C OS=Arabidopsis thaliana GN=RBP45C PE=2 SV=1 285 359 4.0E-12
sp|Q9FPJ8|RB45A_ARATH Polyadenylate-binding protein RBP45A OS=Arabidopsis thaliana GN=RBP45A PE=2 SV=1 285 361 2.0E-11
sp|Q5RF83|CIRBP_PONAB Cold-inducible RNA-binding protein OS=Pongo abelii GN=CIRBP PE=2 SV=1 289 364 4.0E-11
sp|Q14011|CIRBP_HUMAN Cold-inducible RNA-binding protein OS=Homo sapiens GN=CIRBP PE=1 SV=1 289 364 4.0E-11
sp|Q9SAB3|RB45B_ARATH Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana GN=RBP45B PE=1 SV=1 290 383 4.0E-11
sp|P10979|GRPA_MAIZE Glycine-rich RNA-binding, abscisic acid-inducible protein OS=Zea mays GN=RAB15 PE=1 SV=1 289 364 4.0E-11
sp|Q99070|GRP2_SORBI Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor GN=GRP2 PE=2 SV=1 289 364 5.0E-11
sp|F4I3B3|RB47A_ARATH Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana GN=RBP47A PE=2 SV=1 288 361 6.0E-11
sp|P60825|CIRBP_RAT Cold-inducible RNA-binding protein OS=Rattus norvegicus GN=Cirbp PE=2 SV=1 289 364 1.0E-10
sp|P60824|CIRBP_MOUSE Cold-inducible RNA-binding protein OS=Mus musculus GN=Cirbp PE=1 SV=1 289 364 1.0E-10
sp|P60826|CIRBP_CRIGR Cold-inducible RNA-binding protein OS=Cricetulus griseus GN=CIRBP PE=2 SV=1 289 364 1.0E-10
sp|Q28IQ9|CIRBP_XENTR Cold-inducible RNA-binding protein OS=Xenopus tropicalis GN=cirbp PE=2 SV=1 289 364 1.0E-10
sp|Q9M427|UBP1_NICPL Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia GN=UBP1 PE=2 SV=1 286 359 1.0E-10
sp|Q9LQI9|UBP1B_ARATH Oligouridylate-binding protein 1B OS=Arabidopsis thaliana GN=UBP1B PE=1 SV=1 286 359 2.0E-10
sp|O93235|CIRBA_XENLA Cold-inducible RNA-binding protein A OS=Xenopus laevis GN=cirbp-a PE=1 SV=2 289 364 2.0E-10
sp|P0C8Z4|RMXL3_PANTR RNA-binding motif protein, X-linked-like-3 OS=Pan troglodytes GN=RBMXL3 PE=3 SV=1 289 361 2.0E-10
sp|Q6IRQ4|RBMX_XENLA RNA-binding motif protein, X chromosome OS=Xenopus laevis GN=rbmx PE=2 SV=1 289 364 2.0E-10
sp|Q7ZWA3|RBMX_DANRE RNA-binding motif protein, X chromosome OS=Danio rerio GN=rbmx PE=2 SV=1 289 364 2.0E-10
sp|Q9PTX2|CIRBP_LITCT Cold-inducible RNA-binding protein OS=Lithobates catesbeiana GN=cirbp PE=2 SV=1 289 364 3.0E-10
sp|Q9LEB4|RBP45_NICPL Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia GN=RBP45 PE=1 SV=1 284 361 3.0E-10
sp|Q8N7X1|RMXL3_HUMAN RNA-binding motif protein, X-linked-like-3 OS=Homo sapiens GN=RBMXL3 PE=2 SV=2 289 361 5.0E-10
sp|Q9DED4|CIRBB_XENLA Cold-inducible RNA-binding protein B OS=Xenopus laevis GN=cirbp-b PE=1 SV=1 289 364 5.0E-10
sp|Q03878|GRP1_DAUCA Glycine-rich RNA-binding protein OS=Daucus carota PE=2 SV=1 289 364 6.0E-10
sp|P52912|TIA1_MOUSE Nucleolysin TIA-1 OS=Mus musculus GN=Tia1 PE=1 SV=1 287 354 1.0E-09
sp|Q03251|RBG8_ARATH Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana GN=RBG8 PE=1 SV=1 289 364 1.0E-09
sp|P31483|TIA1_HUMAN Nucleolysin TIA-1 isoform p40 OS=Homo sapiens GN=TIA1 PE=1 SV=3 287 354 1.0E-09
sp|Q9LEB3|RBP47_NICPL Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia GN=RBP47 PE=1 SV=1 286 361 2.0E-09
sp|Q9LKA4|UBA2C_ARATH UBP1-associated protein 2C OS=Arabidopsis thaliana GN=UBA2C PE=2 SV=1 259 348 2.0E-09
sp|Q8RWN5|RZ1C_ARATH Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana GN=RZ1C PE=1 SV=1 289 368 2.0E-09
sp|Q96E39|RMXL1_HUMAN RNA binding motif protein, X-linked-like-1 OS=Homo sapiens GN=RBMXL1 PE=1 SV=1 289 364 2.0E-09
sp|Q0WW84|RB47B_ARATH Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana GN=RBP47B PE=2 SV=1 288 361 4.0E-09
sp|Q76LC6|RBM24_DANRE RNA-binding protein 24 OS=Danio rerio GN=rbm24 PE=2 SV=1 284 380 4.0E-09
sp|Q9WV02|RBMX_MOUSE RNA-binding motif protein, X chromosome OS=Mus musculus GN=Rbmx PE=1 SV=1 289 364 5.0E-09
sp|Q9C652|RBP1_ARATH RNA-binding protein 1 OS=Arabidopsis thaliana GN=RBP1 PE=2 SV=1 281 364 5.0E-09
sp|A5A6M3|RBMX_PANTR RNA-binding motif protein, X chromosome OS=Pan troglodytes GN=RBMX PE=2 SV=1 289 364 5.0E-09
sp|P38159|RBMX_HUMAN RNA-binding motif protein, X chromosome OS=Homo sapiens GN=RBMX PE=1 SV=3 289 364 5.0E-09
sp|Q91VM5|RMXL1_MOUSE RNA binding motif protein, X-linked-like-1 OS=Mus musculus GN=Rbmxl1 PE=2 SV=1 289 364 5.0E-09
sp|Q8VXZ9|R47BP_ARATH Polyadenylate-binding protein RBP47B' OS=Arabidopsis thaliana GN=RBP47B' PE=2 SV=1 281 365 5.0E-09
sp|Q4V898|RBMX_RAT RNA-binding motif protein, X chromosome OS=Rattus norvegicus GN=Rbmx PE=1 SV=1 289 364 5.0E-09
sp|Q4R7F0|RBMX_MACFA RNA-binding motif protein, X chromosome OS=Macaca fascicularis GN=RBMX PE=2 SV=1 289 364 5.0E-09
sp|P38760|MIP6_YEAST RNA-binding protein MIP6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MIP6 PE=1 SV=1 290 350 6.0E-09
sp|Q7T3I7|RBM38_XENLA RNA-binding protein 38 OS=Xenopus laevis GN=rbm38 PE=1 SV=2 284 368 6.0E-09
sp|Q05966|GRP10_BRANA Glycine-rich RNA-binding protein 10 OS=Brassica napus GN=GRP10 PE=2 SV=1 289 364 6.0E-09
sp|Q9SVM8|RBG2_ARATH Glycine-rich RNA-binding protein 2, mitochondrial OS=Arabidopsis thaliana GN=RBG2 PE=1 SV=1 289 365 7.0E-09
sp|Q9I8B3|RB24B_XENLA RNA-binding protein 24-B OS=Xenopus laevis GN=rbm24-b PE=2 SV=1 284 368 7.0E-09
sp|Q01085|TIAR_HUMAN Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=1 237 354 7.0E-09
sp|Q9H0Z9|RBM38_HUMAN RNA-binding protein 38 OS=Homo sapiens GN=RBM38 PE=1 SV=2 284 368 8.0E-09
sp|Q6GQD3|RB24A_XENLA RNA-binding protein 24-A OS=Xenopus laevis GN=rbm24-a PE=2 SV=1 284 368 8.0E-09
sp|P70318|TIAR_MOUSE Nucleolysin TIAR OS=Mus musculus GN=Tial1 PE=1 SV=1 286 354 8.0E-09
sp|Q6P8A7|RBM24_XENTR RNA-binding protein 24 OS=Xenopus tropicalis GN=rbm24 PE=2 SV=1 284 368 1.0E-08
sp|P84586|RMXRL_RAT RNA-binding motif protein, X chromosome retrogene-like OS=Rattus norvegicus GN=Rbmxrtl PE=1 SV=1 289 364 1.0E-08
sp|Q9BX46|RBM24_HUMAN RNA-binding protein 24 OS=Homo sapiens GN=RBM24 PE=1 SV=1 284 368 2.0E-08
sp|Q9LIS2|RBG4_ARATH Glycine-rich RNA-binding protein 4, mitochondrial OS=Arabidopsis thaliana GN=RBG4 PE=2 SV=1 289 364 2.0E-08
sp|P32831|NGR1_YEAST Negative growth regulatory protein NGR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NGR1 PE=1 SV=2 290 355 2.0E-08
sp|D4AE41|RMXL1_RAT RNA binding motif protein, X-linked-like-1 OS=Rattus norvegicus GN=Rbmxl1 PE=3 SV=1 289 364 2.0E-08
sp|P49310|GRP1_SINAL Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba PE=2 SV=1 289 364 2.0E-08
sp|Q5ZJX4|RBM38_CHICK RNA-binding protein 38 OS=Gallus gallus GN=RBM38 PE=2 SV=1 284 368 2.0E-08
sp|Q03250|RBG7_ARATH Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana GN=RBG7 PE=1 SV=1 289 364 2.0E-08
sp|D3Z4I3|RBM24_MOUSE RNA-binding protein 24 OS=Mus musculus GN=Rbm24 PE=3 SV=1 284 368 2.0E-08
sp|Q9LIN3|RZ1A_ARATH Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana GN=RZ1A PE=1 SV=1 284 364 2.0E-08
sp|Q6DIV4|RBM38_XENTR RNA-binding protein 38 OS=Xenopus tropicalis GN=rbm38 PE=2 SV=1 284 368 2.0E-08
sp|Q5ZMA3|RBM24_CHICK RNA-binding protein 24 OS=Gallus gallus GN=RBM24 PE=2 SV=2 284 368 3.0E-08
sp|Q43472|GRP_HORVU Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare GN=blt801 PE=1 SV=1 289 364 3.0E-08
sp|Q29RT0|RBMX_BOVIN RNA-binding motif protein, X chromosome OS=Bos taurus GN=RBMX PE=2 SV=1 289 365 3.0E-08
sp|Q9H0L4|CSTFT_HUMAN Cleavage stimulation factor subunit 2 tau variant OS=Homo sapiens GN=CSTF2T PE=1 SV=1 283 367 3.0E-08
sp|P51991|ROA3_HUMAN Heterogeneous nuclear ribonucleoprotein A3 OS=Homo sapiens GN=HNRNPA3 PE=1 SV=2 284 341 3.0E-08
sp|Q6URK4|ROA3_RAT Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus GN=Hnrnpa3 PE=1 SV=1 284 341 3.0E-08
sp|Q8BG05|ROA3_MOUSE Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus GN=Hnrnpa3 PE=1 SV=1 284 341 3.0E-08
sp|Q9M1S3|ARP1_ARATH Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana GN=ARP1 PE=2 SV=1 284 368 3.0E-08
sp|Q32P51|RA1L2_HUMAN Heterogeneous nuclear ribonucleoprotein A1-like 2 OS=Homo sapiens GN=HNRNPA1L2 PE=2 SV=2 284 341 4.0E-08
sp|Q1LZH0|U1SBP_BOVIN U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Bos taurus GN=SNRNP35 PE=2 SV=1 288 361 5.0E-08
sp|P0DJD4|RBY1C_HUMAN RNA-binding motif protein, Y chromosome, family 1 member C OS=Homo sapiens GN=RBMY1C PE=1 SV=1 289 364 5.0E-08
sp|Q8C7E9|CSTFT_MOUSE Cleavage stimulation factor subunit 2 tau variant OS=Mus musculus GN=Cstf2t PE=1 SV=2 283 367 5.0E-08
sp|P0DJD3|RBY1A_HUMAN RNA-binding motif protein, Y chromosome, family 1 member A1 OS=Homo sapiens GN=RBMY1A1 PE=1 SV=1 289 364 5.0E-08
sp|A6NEQ0|RBY1E_HUMAN RNA-binding motif protein, Y chromosome, family 1 member E OS=Homo sapiens GN=RBMY1E PE=2 SV=1 289 364 5.0E-08
sp|P0C7P1|RBY1D_HUMAN RNA-binding motif protein, Y chromosome, family 1 member D OS=Homo sapiens GN=RBMY1D PE=2 SV=1 289 364 6.0E-08
sp|Q9SX79|RB47C_ARATH Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana GN=RBP47C PE=2 SV=1 288 351 6.0E-08
sp|A6NDE4|RBY1B_HUMAN RNA-binding motif protein, Y chromosome, family 1 member B OS=Homo sapiens GN=RBMY1B PE=2 SV=2 289 364 6.0E-08
sp|P04256|ROA1_RAT Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus GN=Hnrnpa1 PE=1 SV=3 284 341 6.0E-08
sp|A5A6H4|ROA1_PANTR Heterogeneous nuclear ribonucleoprotein A1 OS=Pan troglodytes GN=HNRNPA1 PE=2 SV=1 284 341 6.0E-08
sp|P49312|ROA1_MOUSE Heterogeneous nuclear ribonucleoprotein A1 OS=Mus musculus GN=Hnrnpa1 PE=1 SV=2 284 341 6.0E-08
sp|P09867|ROA1_BOVIN Heterogeneous nuclear ribonucleoprotein A1 OS=Bos taurus GN=HNRNPA1 PE=1 SV=2 284 341 6.0E-08
sp|P51968|RO31_XENLA Heterogeneous nuclear ribonucleoprotein A3 homolog 1 OS=Xenopus laevis PE=2 SV=1 284 341 6.0E-08
sp|Q9FNR1|RBG3_ARATH Glycine-rich RNA-binding protein 3, mitochondrial OS=Arabidopsis thaliana GN=RBG3 PE=2 SV=1 289 365 6.0E-08
sp|Q05AT9|U1SBP_XENLA U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Xenopus laevis GN=snrnp35 PE=2 SV=1 284 361 6.0E-08
sp|O75526|RMXL2_HUMAN RNA-binding motif protein, X-linked-like-2 OS=Homo sapiens GN=RBMXL2 PE=1 SV=3 289 365 8.0E-08
sp|P51992|RO32_XENLA Heterogeneous nuclear ribonucleoprotein A3 homolog 2 OS=Xenopus laevis PE=2 SV=1 284 341 8.0E-08
sp|P09651|ROA1_HUMAN Heterogeneous nuclear ribonucleoprotein A1 OS=Homo sapiens GN=HNRNPA1 PE=1 SV=5 284 341 8.0E-08
sp|P17130|ROA1_XENLA Heterogeneous nuclear ribonucleoproteins A1 homolog OS=Xenopus laevis GN=hnrnpa1 PE=2 SV=1 284 341 9.0E-08
sp|Q28521|ROA1_MACMU Heterogeneous nuclear ribonucleoprotein A1 OS=Macaca mulatta GN=HNRNPA1 PE=2 SV=3 284 340 9.0E-08
sp|O22173|PABP4_ARATH Polyadenylate-binding protein 4 OS=Arabidopsis thaliana GN=PAB4 PE=1 SV=1 288 374 9.0E-08
sp|Q9SX80|R47CP_ARATH Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana GN=RBP47C' PE=2 SV=1 288 351 9.0E-08
sp|O35698|RBY1A_MOUSE RNA-binding motif protein, Y chromosome, family 1 member A1 OS=Mus musculus GN=Rbmy1a1 PE=1 SV=2 289 364 1.0E-07
sp|P33240|CSTF2_HUMAN Cleavage stimulation factor subunit 2 OS=Homo sapiens GN=CSTF2 PE=1 SV=1 283 382 1.0E-07
sp|Q5RDA3|CSTF2_PONAB Cleavage stimulation factor subunit 2 OS=Pongo abelii GN=CSTF2 PE=2 SV=1 283 382 1.0E-07
sp|Q8HXM1|CSTF2_BOVIN Cleavage stimulation factor subunit 2 OS=Bos taurus GN=CSTF2 PE=2 SV=1 283 382 1.0E-07
sp|Q13151|ROA0_HUMAN Heterogeneous nuclear ribonucleoprotein A0 OS=Homo sapiens GN=HNRNPA0 PE=1 SV=1 289 364 1.0E-07
sp|P49311|GRP2_SINAL Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba PE=2 SV=1 289 364 1.0E-07
sp|Q5U1W5|U1SBP_RAT U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Rattus norvegicus GN=Snrnp35 PE=2 SV=1 288 361 1.0E-07
sp|Q00539|NAM8_YEAST Protein NAM8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NAM8 PE=1 SV=2 290 361 2.0E-07
sp|P21522|ROA1_SCHAM Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog OS=Schistocerca americana GN=HNRNP PE=2 SV=1 284 339 2.0E-07
sp|Q8BIQ5|CSTF2_MOUSE Cleavage stimulation factor subunit 2 OS=Mus musculus GN=Cstf2 PE=1 SV=2 283 382 2.0E-07
sp|Q62176|RBM38_MOUSE RNA-binding protein 38 OS=Mus musculus GN=Rbm38 PE=1 SV=2 284 368 2.0E-07
sp|Q60990|RBY1B_MOUSE RNA-binding motif protein, Y chromosome, family 1 member B OS=Mus musculus GN=Rbmy1b PE=2 SV=3 289 364 2.0E-07
sp|Q2U256|PPIL4_ASPOR Peptidyl-prolyl cis-trans isomerase-like 4 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=cyp6 PE=3 SV=1 290 361 2.0E-07
sp|Q15415|RBY1F_HUMAN RNA-binding motif protein, Y chromosome, family 1 member F/J OS=Homo sapiens GN=RBMY1F PE=1 SV=2 289 364 3.0E-07
sp|Q9SIX3|RBG1_ARATH Probable glycine-rich RNA-binding protein 1 OS=Arabidopsis thaliana GN=RBG1 PE=2 SV=2 285 359 3.0E-07
sp|Q15427|SF3B4_HUMAN Splicing factor 3B subunit 4 OS=Homo sapiens GN=SF3B4 PE=1 SV=1 290 389 3.0E-07
sp|Q9CX86|ROA0_MOUSE Heterogeneous nuclear ribonucleoprotein A0 OS=Mus musculus GN=Hnrnpa0 PE=1 SV=1 289 364 3.0E-07
sp|P07909|ROA1_DROME Heterogeneous nuclear ribonucleoprotein A1 OS=Drosophila melanogaster GN=Hrb98DE PE=2 SV=1 284 337 3.0E-07
sp|Q9D384|U1SBP_MOUSE U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Mus musculus GN=Snrnp35 PE=2 SV=1 288 361 3.0E-07
sp|Q9LES2|UBA2A_ARATH UBP1-associated protein 2A OS=Arabidopsis thaliana GN=UBA2A PE=1 SV=1 282 336 4.0E-07
sp|Q4R813|RMXL2_MACFA RNA-binding motif protein, X-linked-like-2 OS=Macaca fascicularis GN=RBMXL2 PE=2 SV=1 289 365 4.0E-07
sp|Q54BM2|PAP1A_DICDI Polyadenylate-binding protein 1-A OS=Dictyostelium discoideum GN=pabpc1A PE=1 SV=1 288 369 4.0E-07
sp|Q6AYL5|SF3B4_RAT Splicing factor 3B subunit 4 OS=Rattus norvegicus GN=Sf3b4 PE=2 SV=1 290 389 4.0E-07
sp|Q8QZY9|SF3B4_MOUSE Splicing factor 3B subunit 4 OS=Mus musculus GN=Sf3b4 PE=1 SV=1 290 389 4.0E-07
sp|Q13310|PABP4_HUMAN Polyadenylate-binding protein 4 OS=Homo sapiens GN=PABPC4 PE=1 SV=1 290 369 5.0E-07
sp|Q9VVE5|MSIR6_DROME RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melanogaster GN=Rbp6 PE=2 SV=3 289 364 5.0E-07
sp|Q04836|CP31A_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana GN=CP31A PE=1 SV=1 288 364 5.0E-07
sp|P0CP46|PABP_CRYNJ Polyadenylate-binding protein, cytoplasmic and nuclear OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=PAB1 PE=3 SV=1 288 361 5.0E-07
sp|P0CP47|PABP_CRYNB Polyadenylate-binding protein, cytoplasmic and nuclear OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=PAB1 PE=3 SV=1 288 361 5.0E-07
sp|O60176|YG41_SCHPO Uncharacterized RNA-binding protein C23E6.01c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC23E6.01c PE=1 SV=2 286 361 7.0E-07
sp|P32588|PUB1_YEAST Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PUB1 PE=1 SV=4 288 364 9.0E-07
sp|Q9H361|PABP3_HUMAN Polyadenylate-binding protein 3 OS=Homo sapiens GN=PABPC3 PE=1 SV=2 263 389 1.0E-06
sp|O13829|RU17_SCHPO U1 small nuclear ribonucleoprotein 70 kDa homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=usp101 PE=1 SV=1 283 361 2.0E-06
sp|P16914|ELAV_DROME Protein elav OS=Drosophila melanogaster GN=elav PE=2 SV=1 290 351 2.0E-06
sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2 OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1 290 351 2.0E-06
sp|O22173|PABP4_ARATH Polyadenylate-binding protein 4 OS=Arabidopsis thaliana GN=PAB4 PE=1 SV=1 290 361 3.0E-06
sp|Q13310|PABP4_HUMAN Polyadenylate-binding protein 4 OS=Homo sapiens GN=PABPC4 PE=1 SV=1 288 361 3.0E-06
sp|P23241|ELAV_DROVI Protein elav OS=Drosophila virilis GN=elav PE=3 SV=1 290 351 3.0E-06
sp|Q9FXA2|PABP8_ARATH Polyadenylate-binding protein 8 OS=Arabidopsis thaliana GN=PAB8 PE=1 SV=1 290 382 3.0E-06
sp|A4QUF0|PABP_MAGO7 Polyadenylate-binding protein, cytoplasmic and nuclear OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=PAB1 PE=3 SV=1 290 364 3.0E-06
sp|P27476|NSR1_YEAST Nuclear localization sequence-binding protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NSR1 PE=1 SV=1 290 359 6.0E-06
sp|A5DM21|PABP_PICGU Polyadenylate-binding protein, cytoplasmic and nuclear OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=PAB1 PE=3 SV=2 288 361 6.0E-06
sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2 OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1 290 383 7.0E-06
sp|Q5RC80|RBM39_PONAB RNA-binding protein 39 OS=Pongo abelii GN=RBM39 PE=2 SV=1 288 361 7.0E-06
sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea PE=1 SV=1 285 364 7.0E-06
sp|Q04836|CP31A_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana GN=CP31A PE=1 SV=1 289 364 8.0E-06
sp|O22703|RZ1B_ARATH Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana GN=RZ1B PE=2 SV=1 289 379 8.0E-06
sp|Q14498|RBM39_HUMAN RNA-binding protein 39 OS=Homo sapiens GN=RBM39 PE=1 SV=2 288 361 8.0E-06
sp|Q8VH51|RBM39_MOUSE RNA-binding protein 39 OS=Mus musculus GN=Rbm39 PE=1 SV=2 288 361 8.0E-06
sp|O64380|PABP3_ARATH Polyadenylate-binding protein 3 OS=Arabidopsis thaliana GN=PAB3 PE=2 SV=1 262 385 9.0E-06
sp|O89086|RBM3_MOUSE RNA-binding protein 3 OS=Mus musculus GN=Rbm3 PE=1 SV=1 289 364 9.0E-06
sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1 265 361 9.0E-06
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GO

GO Term Description Terminal node
GO:0003723 RNA binding Yes
GO:0097159 organic cyclic compound binding No
GO:0005488 binding No
GO:1901363 heterocyclic compound binding No
GO:0003676 nucleic acid binding No
GO:0003674 molecular_function No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.3623 0.7629 0.0092 0.0289 0.0701 0.0015 0.1083 0.0488 0.0224 0.0096

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4075
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6806
Ophiocordyceps australis map64 (Brazil) OphauB2|3022
Ophiocordyceps camponoti-floridani Ophcf2|07333
Ophiocordyceps camponoti-rufipedis Ophun1|5600
Ophiocordyceps kimflemingae Ophio5|8375
Ophiocordyceps subramaniannii Hirsu2|8215 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8215
MAYAPPPGPNSLPARPPASSSTNPSSSISNNNNNRSGFKPAFGSTSSQSPAASAAPQPYPAASHFPPGTAAYAGA
SSAPSSYTAAGHYGSRGSQYGHSSQYAPTLSSAGAYAASSNPSSSGSYAGYPGAAPGLSTSSSSAQSYGYAPSSS
SSHQQQQARGQQQYPAPHHHQQPAQGGGYGAPNSGYGASAYAAPQIQNPFPAPGAGGAGGFDASEAAQIAEWQSA
YNGMPQLGRDGKSVATVSEPSKPEAPAAAADDGHPDKKKTVVRQGGGKKWTDDTLLDWDPSHLRLFVGNLAGETT
DESLLKAFARWKSVQKARVIRDKRTTKSKGYGFVSFSDADDFFQAAKEMNGKYIQSHPVVVRKANTEIKVASVRD
KAKGPPAGRHGTAAGAKAGKKGAGRGVGRAHEPGLGPTPGAGVTKPGQKTKNGLRLLG*
Coding >Hirsu2|8215
ATGGCATACGCGCCGCCTCCAGGCCCCAACTCGCTGCCTGCGAGACCGCCGGCCTCCTCGTCGACCAACCCCTCC
TCCTCCATCAGCAACAACAACAACAACCGATCCGGCTTCAAGCCCGCCTTCGGCTCTACATCTTCGCAGTCCCCC
GCCGCTTCAGCCGCACCGCAGCCGTACCCGGCGGCTTCGCACTTCCCGCCCGGCACCGCCGCGTACGCAGGTGCC
TCGTCCGCACCAAGCAGCTACACGGCCGCGGGCCACTACGGGTCGCGCGGCAGCCAGTATGGCCACTCGAGCCAG
TACGCTCCGACTTTGTCGTCGGCGGGCGCCTACGCCGCATCGTCGAACCCGTCTTCGTCCGGCTCCTACGCCGGC
TACCCCGGCGCGGCGCCCGGCTTGAGCACCTCGTCCTCGTCGGCACAGAGCTACGGCTACGCTCCTTCGTCGTCT
TCATCACACCAGCAGCAGCAGGCGCGCGGACAGCAGCAGTACCCGGCCCCGCACCACCACCAACAGCCGGCGCAA
GGGGGCGGGTACGGCGCGCCCAACAGCGGGTACGGCGCGTCGGCCTACGCGGCGCCGCAGATCCAGAACCCGTTC
CCGGCGCCGGGCGCGGGCGGCGCGGGCGGCTTCGACGCCAGCGAGGCGGCGCAGATCGCGGAGTGGCAGAGCGCG
TACAACGGCATGCCGCAGCTCGGCCGGGACGGCAAGTCGGTGGCGACGGTGTCGGAGCCGAGCAAGCCCGAGGCA
CCGGCGGCGGCGGCAGACGACGGCCACCCGGACAAGAAGAAGACGGTGGTGCGGCAGGGCGGCGGCAAGAAGTGG
ACGGACGACACGCTGCTGGACTGGGACCCGTCGCACCTGCGGCTCTTCGTCGGCAACCTGGCGGGCGAGACGACG
GACGAGTCGCTGCTCAAGGCCTTTGCGCGCTGGAAGTCGGTGCAGAAGGCGCGCGTGATCCGCGACAAGCGCACG
ACCAAGTCCAAGGGCTACGGCTTCGTCAGCTTCAGCGACGCCGACGACTTCTTCCAGGCGGCCAAGGAGATGAAC
GGCAAGTACATCCAGAGCCACCCGGTGGTGGTGCGCAAGGCCAACACCGAGATCAAGGTGGCCAGCGTGCGCGAC
AAGGCCAAGGGCCCGCCCGCCGGCCGCCACGGGACTGCCGCCGGCGCCAAGGCCGGCAAGAAGGGCGCCGGCAGG
GGCGTCGGCCGGGCGCACGAGCCGGGCCTCGGCCCCACGCCCGGCGCCGGCGTCACCAAGCCCGGCCAGAAGACC
AAGAACGGGCTGCGGCTGCTCGGGTAG
Transcript >Hirsu2|8215
ATGGCATACGCGCCGCCTCCAGGCCCCAACTCGCTGCCTGCGAGACCGCCGGCCTCCTCGTCGACCAACCCCTCC
TCCTCCATCAGCAACAACAACAACAACCGATCCGGCTTCAAGCCCGCCTTCGGCTCTACATCTTCGCAGTCCCCC
GCCGCTTCAGCCGCACCGCAGCCGTACCCGGCGGCTTCGCACTTCCCGCCCGGCACCGCCGCGTACGCAGGTGCC
TCGTCCGCACCAAGCAGCTACACGGCCGCGGGCCACTACGGGTCGCGCGGCAGCCAGTATGGCCACTCGAGCCAG
TACGCTCCGACTTTGTCGTCGGCGGGCGCCTACGCCGCATCGTCGAACCCGTCTTCGTCCGGCTCCTACGCCGGC
TACCCCGGCGCGGCGCCCGGCTTGAGCACCTCGTCCTCGTCGGCACAGAGCTACGGCTACGCTCCTTCGTCGTCT
TCATCACACCAGCAGCAGCAGGCGCGCGGACAGCAGCAGTACCCGGCCCCGCACCACCACCAACAGCCGGCGCAA
GGGGGCGGGTACGGCGCGCCCAACAGCGGGTACGGCGCGTCGGCCTACGCGGCGCCGCAGATCCAGAACCCGTTC
CCGGCGCCGGGCGCGGGCGGCGCGGGCGGCTTCGACGCCAGCGAGGCGGCGCAGATCGCGGAGTGGCAGAGCGCG
TACAACGGCATGCCGCAGCTCGGCCGGGACGGCAAGTCGGTGGCGACGGTGTCGGAGCCGAGCAAGCCCGAGGCA
CCGGCGGCGGCGGCAGACGACGGCCACCCGGACAAGAAGAAGACGGTGGTGCGGCAGGGCGGCGGCAAGAAGTGG
ACGGACGACACGCTGCTGGACTGGGACCCGTCGCACCTGCGGCTCTTCGTCGGCAACCTGGCGGGCGAGACGACG
GACGAGTCGCTGCTCAAGGCCTTTGCGCGCTGGAAGTCGGTGCAGAAGGCGCGCGTGATCCGCGACAAGCGCACG
ACCAAGTCCAAGGGCTACGGCTTCGTCAGCTTCAGCGACGCCGACGACTTCTTCCAGGCGGCCAAGGAGATGAAC
GGCAAGTACATCCAGAGCCACCCGGTGGTGGTGCGCAAGGCCAACACCGAGATCAAGGTGGCCAGCGTGCGCGAC
AAGGCCAAGGGCCCGCCCGCCGGCCGCCACGGGACTGCCGCCGGCGCCAAGGCCGGCAAGAAGGGCGCCGGCAGG
GGCGTCGGCCGGGCGCACGAGCCGGGCCTCGGCCCCACGCCCGGCGCCGGCGTCACCAAGCCCGGCCAGAAGACC
AAGAACGGGCTGCGGCTGCTCGGGTAG
Gene >Hirsu2|8215
ATGGCATACGCGCCGCCTCCAGGCCCCAACTCGCTGCCTGCGAGACCGCCGGCCTCCTCGTCGACCAACCCCTCC
TCCTCCATCAGCAACAACAACAACAACCGATCCGGCTTCAAGCCCGCCTTCGGCTCTACATCTTCGCAGTCCCCC
GCCGCTTCAGCCGCACCGCAGCCGTACCCGGCGGCTTCGCACTTCCCGCCCGGCACCGCCGCGTACGCAGGTGCC
TCGTCCGCACCAAGCAGCTACACGGCCGCGGGCCACTACGGGTCGCGCGGCAGCCAGTATGGCCACTCGAGCCAG
TACGCTCCGACTTTGTCGTCGGCGGGCGCCTACGCCGCATCGTCGAACCCGTCTTCGTCCGGCTCCTACGCCGGC
TACCCCGGCGCGGCGCCCGGCTTGAGCACCTCGTCCTCGTCGGCACAGAGCTACGGCTACGCTCCTTCGTCGTCT
TCATCACACCAGCAGCAGCAGGCGCGCGGACAGCAGCAGTACCCGGCCCCGCACCACCACCAACAGCCGGCGCAA
GGGGGCGGGTACGGCGCGCCCAACAGCGGGTACGGCGCGTCGGCCTACGCGGCGCCGCAGATCCAGAACCCGTTC
CCGGCGCCGGGCGCGGGCGGCGCGGGCGGCTTCGACGCCAGCGAGGCGGCGCAGATCGCGGAGTGGCAGAGCGCG
TACAACGGCATGCCGCAGCTCGGCCGGGACGGCAAGTCGGTGGCGACGGTGTCGGAGCCGAGCAAGCCCGAGGCA
CCGGCGGCGGCGGCAGACGACGGCCACCCGGACAAGAAGAAGACGGTGGTGCGGCAGGGCGGCGGCAAGAAGTGG
ACGGACGACACGCTGCTGGACTGGGACCCGTCGCACCTGCGGCTCTTCGTCGGCAACCTGGCGGGCGAGACGACG
GACGAGTCGCTGCTCAAGGCCTTTGCGCGCTGGAAGTCGGTGCAGAAGGCGCGCGTGATCCGCGACAAGCGCACG
ACCAAGTCCAAGGGCTACGGCTTCGTCAGCTTCAGCGACGCCGACGACTTCTTCCAGGCGGCCAAGGAGATGAAC
GGCAAGTACATCCAGAGCCACCCGGTGGTGGTGCGCAAGGCCAACACCGAGATCAAGGTGGCCAGCGTGCGCGAC
AAGGCCAAGGGCCCGCCCGCCGGCCGCCACGGGACTGCCGCCGGCGCCAAGGCCGGCAAGAAGGGCGCCGGCAGG
GGCGTCGGCCGGGCGCACGAGCCGGGCCTCGGCCCCACGCCCGGCGCCGGCGTCACCAAGCCCGGCCAGAAGACC
AAGAACGGGCTGCGGCTGCTCGGGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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