© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|82 |
| Gene name | |
| Location | Contig_101:19560..20217 |
| Strand | - |
| Gene length (bp) | 657 |
| Transcript length (bp) | 657 |
| Coding sequence length (bp) | 657 |
| Protein length (aa) | 219 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF11702 | DUF3295 | Protein of unknown function (DUF3295) | 2.4E-27 | 108 | 218 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.6846 | 0.4338 | 0.0205 | 0.1472 | 0.4563 | 0.0221 | 0.1103 | 0.1347 | 0.2786 | 0.4061 |
| Orthofinder run ID | 4 |
| Orthogroup | 7120 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps kimflemingae | Ophio5|5395 |
| Ophiocordyceps subramaniannii | Hirsu2|7738 |
| Ophiocordyceps subramaniannii | Hirsu2|82 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|82 MFQISTSSEKGSVKSTGLSDLHVAKSVQSSKCDLLTYTKTATIAFQTSEEDDFAVDDCSFDDSSEPGMRWLLFRR IAPQVGQQQQKSLITLMLENARNQLSTSDKSSSEVPWSNVQHTPTTHDCEKTPASLSPRTTRRSMHATELTGSLR FGLVMERQQEAFTTDTFLKRRQTLHDSVNLRRLPDKPCMKASEDVNASLWKNFFLDEASRDHYHSRGW* |
| Coding | >Hirsu2|82 ATGTTCCAGATAAGCACCTCATCGGAGAAGGGCTCGGTCAAGTCTACAGGCTTGTCTGATCTTCACGTTGCAAAG AGTGTCCAGTCATCCAAATGTGACCTGCTCACATACACAAAAACAGCAACAATCGCATTCCAAACTTCGGAGGAG GACGACTTTGCTGTCGACGACTGCAGCTTTGATGACAGTAGCGAGCCGGGCATGAGGTGGCTGTTGTTCCGGCGT ATTGCGCCCCAGGTCGGGCAACAGCAGCAGAAATCACTCATTACACTGATGCTGGAGAATGCAAGAAATCAGCTG TCAACCTCAGACAAGTCCAGCAGCGAGGTGCCTTGGTCCAATGTTCAACATACTCCAACCACACACGACTGCGAG AAAACCCCGGCATCACTATCGCCACGAACGACTCGTCGCAGTATGCACGCGACTGAGCTCACTGGTTCTCTGAGA TTTGGACTCGTGATGGAGAGGCAGCAAGAGGCATTTACAACCGATACCTTCCTGAAACGTCGGCAGACATTGCAT GATTCGGTCAACCTCAGGCGGTTGCCTGACAAGCCTTGCATGAAGGCAAGCGAGGACGTTAATGCTAGCTTGTGG AAGAATTTTTTCTTGGACGAGGCATCCAGGGACCATTACCATTCTAGGGGCTGGTAA |
| Transcript | >Hirsu2|82 ATGTTCCAGATAAGCACCTCATCGGAGAAGGGCTCGGTCAAGTCTACAGGCTTGTCTGATCTTCACGTTGCAAAG AGTGTCCAGTCATCCAAATGTGACCTGCTCACATACACAAAAACAGCAACAATCGCATTCCAAACTTCGGAGGAG GACGACTTTGCTGTCGACGACTGCAGCTTTGATGACAGTAGCGAGCCGGGCATGAGGTGGCTGTTGTTCCGGCGT ATTGCGCCCCAGGTCGGGCAACAGCAGCAGAAATCACTCATTACACTGATGCTGGAGAATGCAAGAAATCAGCTG TCAACCTCAGACAAGTCCAGCAGCGAGGTGCCTTGGTCCAATGTTCAACATACTCCAACCACACACGACTGCGAG AAAACCCCGGCATCACTATCGCCACGAACGACTCGTCGCAGTATGCACGCGACTGAGCTCACTGGTTCTCTGAGA TTTGGACTCGTGATGGAGAGGCAGCAAGAGGCATTTACAACCGATACCTTCCTGAAACGTCGGCAGACATTGCAT GATTCGGTCAACCTCAGGCGGTTGCCTGACAAGCCTTGCATGAAGGCAAGCGAGGACGTTAATGCTAGCTTGTGG AAGAATTTTTTCTTGGACGAGGCATCCAGGGACCATTACCATTCTAGGGGCTGGTAA |
| Gene | >Hirsu2|82 ATGTTCCAGATAAGCACCTCATCGGAGAAGGGCTCGGTCAAGTCTACAGGCTTGTCTGATCTTCACGTTGCAAAG AGTGTCCAGTCATCCAAATGTGACCTGCTCACATACACAAAAACAGCAACAATCGCATTCCAAACTTCGGAGGAG GACGACTTTGCTGTCGACGACTGCAGCTTTGATGACAGTAGCGAGCCGGGCATGAGGTGGCTGTTGTTCCGGCGT ATTGCGCCCCAGGTCGGGCAACAGCAGCAGAAATCACTCATTACACTGATGCTGGAGAATGCAAGAAATCAGCTG TCAACCTCAGACAAGTCCAGCAGCGAGGTGCCTTGGTCCAATGTTCAACATACTCCAACCACACACGACTGCGAG AAAACCCCGGCATCACTATCGCCACGAACGACTCGTCGCAGTATGCACGCGACTGAGCTCACTGGTTCTCTGAGA TTTGGACTCGTGATGGAGAGGCAGCAAGAGGCATTTACAACCGATACCTTCCTGAAACGTCGGCAGACATTGCAT GATTCGGTCAACCTCAGGCGGTTGCCTGACAAGCCTTGCATGAAGGCAAGCGAGGACGTTAATGCTAGCTTGTGG AAGAATTTTTTCTTGGACGAGGCATCCAGGGACCATTACCATTCTAGGGGCTGGTAA |