Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8188
Gene name
LocationContig_519:1223..2881
Strand-
Gene length (bp)1658
Transcript length (bp)1458
Coding sequence length (bp)1458
Protein length (aa) 486

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01565 FAD_binding_4 FAD binding domain 8.4E-21 55 185
PF08031 BBE Berberine and berberine like 1.8E-04 434 478

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q54H55|Y8969_DICDI FAD-linked oxidoreductase DDB_G0289697 OS=Dictyostelium discoideum GN=DDB_G0289697 PE=2 SV=1 39 471 5.0E-17
sp|P08159|HDNO_ARTOX 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 22 215 1.0E-13
sp|P43485|MCRA_STRLA Mitomycin radical oxidase OS=Streptomyces lavendulae GN=mcrA PE=1 SV=2 61 290 4.0E-10
sp|D4B1P2|A2372_ARTBC Uncharacterized FAD-linked oxidoreductase ARB_02372 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02372 PE=1 SV=1 28 290 4.0E-09
sp|D7UQ40|SOL5_ALTSO Bifunctional solanapyrone synthase OS=Alternaria solani GN=sol5 PE=1 SV=1 55 216 5.0E-09
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Swissprot ID Swissprot Description Start End E-value
sp|Q54H55|Y8969_DICDI FAD-linked oxidoreductase DDB_G0289697 OS=Dictyostelium discoideum GN=DDB_G0289697 PE=2 SV=1 39 471 5.0E-17
sp|P08159|HDNO_ARTOX 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 22 215 1.0E-13
sp|P43485|MCRA_STRLA Mitomycin radical oxidase OS=Streptomyces lavendulae GN=mcrA PE=1 SV=2 61 290 4.0E-10
sp|D4B1P2|A2372_ARTBC Uncharacterized FAD-linked oxidoreductase ARB_02372 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02372 PE=1 SV=1 28 290 4.0E-09
sp|D7UQ40|SOL5_ALTSO Bifunctional solanapyrone synthase OS=Alternaria solani GN=sol5 PE=1 SV=1 55 216 5.0E-09
sp|Q9FZC7|FOX4_ARATH Flavin-dependent oxidoreductase FOX4 OS=Arabidopsis thaliana GN=FOX4 PE=2 SV=1 81 478 5.0E-09
sp|P93479|RETO_PAPSO Reticuline oxidase OS=Papaver somniferum GN=BBE1 PE=2 SV=1 46 198 7.0E-09
sp|O06997|YVDP_BACSU Uncharacterized FAD-linked oxidoreductase YvdP OS=Bacillus subtilis (strain 168) GN=yvdP PE=1 SV=1 35 260 1.0E-08
sp|P30986|RETO_ESCCA Reticuline oxidase OS=Eschscholzia californica GN=BBE1 PE=1 SV=1 55 478 6.0E-08
sp|Q796Y5|YGAK_BACSU Uncharacterized FAD-linked oxidoreductase YgaK OS=Bacillus subtilis (strain 168) GN=ygaK PE=3 SV=4 55 478 2.0E-07
sp|Q9FUJ3|CKX2_ARATH Cytokinin dehydrogenase 2 OS=Arabidopsis thaliana GN=CKX2 PE=1 SV=2 1 245 2.0E-06
sp|D4AS41|A7056_ARTBC Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07056 PE=1 SV=2 57 198 2.0E-06
sp|Q9FZC6|FOX3_ARATH Flavin-dependent oxidoreductase FOX3 OS=Arabidopsis thaliana GN=FOX3 PE=3 SV=1 81 208 5.0E-06
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GO

GO Term Description Terminal node
GO:0016491 oxidoreductase activity Yes
GO:0050660 flavin adenine dinucleotide binding Yes
GO:0036094 small molecule binding No
GO:0043168 anion binding No
GO:1901265 nucleoside phosphate binding No
GO:0000166 nucleotide binding No
GO:0003824 catalytic activity No
GO:0097159 organic cyclic compound binding No
GO:0005488 binding No
GO:1901363 heterocyclic compound binding No
GO:0043167 ion binding No
GO:0003674 molecular_function No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.0996 0.0427 0.93 0.1634 0.0895 0.035 0.2491 0.3966 0.0828 0.0068

SignalP

SignalP signal predicted Location Score
Yes 1 - 17 0.999623

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

CAZyme category E-value Start End
AA7 2.4E-55 41 472

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup256
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|335
Ophiocordyceps australis map64 (Brazil) OphauB2|694
Ophiocordyceps camponoti-floridani Ophcf2|02398
Ophiocordyceps camponoti-rufipedis Ophun1|845
Ophiocordyceps kimflemingae Ophio5|4415
Ophiocordyceps kimflemingae Ophio5|4416
Ophiocordyceps subramaniannii Hirsu2|10114
Ophiocordyceps subramaniannii Hirsu2|2759
Ophiocordyceps subramaniannii Hirsu2|2760
Ophiocordyceps subramaniannii Hirsu2|5591
Ophiocordyceps subramaniannii Hirsu2|7495
Ophiocordyceps subramaniannii Hirsu2|8188 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8188
MLAPVSALLLLASAASGQNGWPGSIANEVNGPSWPQFANATQRWSTYAAPTFNEVFIPRTEADLSTGLKYLSRAN
KTWLAKSGGHGYSVTLESVQDAVLINMGNFNRIAMNGSKVTVGTGATFAELVDAVAAAGRELTVGACPCVGAMGA
MLGGGLGRLEGLHGLTSDALLSARVALWDGSIVEASKKKNADLFWGIRGAGQNFGIVFEAVFDTYPATNGGMQYS
ADLTFGRDKLEAVVNVTNTLLAPELDPALALAISLANDPETLEPVVTVNIVYPGPPDKGRRFRQLYSALSSNYTE
QMTAWAKLADVALPGVVLAGCPKGKPHDQYSILTENLSASALASAHDSLSAFARQHPAANGSSIFIETFGQRALK
AIPQDSSAFPHRSYFRNAVVFTMTYTDDAVAEAADGWARRMRNTFAQPSVSGYGEWHVYQNYGHGDEPPSALYGY
EGWRHERLTRLKNRYDPHGFFDGFHAIPRNLADWS*
Coding >Hirsu2|8188
ATGCTCGCACCCGTTTCTGCCCTGCTGCTCTTGGCGAGCGCAGCGTCCGGCCAGAACGGCTGGCCCGGCTCCATC
GCCAACGAGGTGAATGGGCCGTCGTGGCCGCAGTTCGCCAACGCCACCCAGCGCTGGTCGACGTACGCGGCCCCG
ACCTTCAACGAGGTCTTCATCCCTCGAACAGAGGCGGACCTGTCGACCGGGCTCAAGTATCTTTCGCGTGCCAAC
AAGACGTGGCTGGCCAAGTCGGGCGGCCACGGATATTCCGTCACGCTCGAGTCGGTGCAGGATGCGGTCCTCATC
AACATGGGCAACTTCAACCGCATAGCCATGAACGGCTCCAAGGTGACGGTGGGAACGGGCGCGACCTTCGCCGAA
CTGGTCGACGCCGTCGCCGCCGCCGGCCGAGAGCTGACCGTCGGCGCGTGTCCATGCGTCGGCGCCATGGGCGCC
ATGCTCGGCGGCGGGCTCGGCCGTCTCGAGGGCCTGCACGGGCTGACGAGCGATGCGCTGCTGAGCGCCCGCGTC
GCGCTGTGGGACGGCAGCATCGTCGAGGCCTCGAAGAAGAAGAACGCGGACCTCTTCTGGGGCATCCGCGGCGCC
GGCCAGAACTTCGGCATCGTCTTCGAGGCCGTCTTCGACACGTACCCGGCCACCAACGGCGGCATGCAGTACAGC
GCAGACCTGACCTTCGGCCGCGACAAGCTCGAGGCCGTCGTCAACGTGACCAACACGCTGCTGGCTCCTGAGCTC
GACCCGGCCCTGGCCCTGGCCATCTCGCTGGCCAACGACCCGGAGACGCTCGAGCCCGTCGTGACGGTCAACATC
GTCTACCCCGGCCCGCCGGACAAGGGCCGGCGGTTCCGGCAGCTGTACTCGGCCCTGAGCTCCAACTACACGGAG
CAGATGACGGCGTGGGCCAAGCTGGCCGACGTTGCCCTGCCGGGCGTCGTCTTGGCCGGGTGCCCCAAGGGCAAG
CCGCACGACCAGTACAGCATCCTGACGGAGAACCTGTCGGCCTCGGCCCTGGCCTCGGCCCACGACTCGCTCTCG
GCCTTTGCGCGGCAGCACCCGGCCGCCAACGGGAGCAGCATCTTCATCGAGACGTTCGGCCAGCGGGCCCTCAAG
GCGATCCCGCAGGACAGCTCCGCCTTCCCGCACCGCAGCTACTTCCGCAACGCCGTCGTCTTCACCATGACGTAC
ACCGACGATGCCGTGGCCGAGGCCGCCGACGGCTGGGCCCGCCGCATGCGCAACACCTTTGCCCAGCCCAGCGTT
TCCGGCTACGGCGAGTGGCACGTCTACCAGAACTACGGACACGGGGACGAGCCGCCGTCGGCCTTGTACGGCTAC
GAGGGCTGGCGCCACGAGAGACTGACGAGGCTGAAGAACCGCTATGATCCGCACGGCTTCTTCGACGGATTCCAC
GCCATCCCGAGGAATCTCGCAGACTGGTCTTGA
Transcript >Hirsu2|8188
ATGCTCGCACCCGTTTCTGCCCTGCTGCTCTTGGCGAGCGCAGCGTCCGGCCAGAACGGCTGGCCCGGCTCCATC
GCCAACGAGGTGAATGGGCCGTCGTGGCCGCAGTTCGCCAACGCCACCCAGCGCTGGTCGACGTACGCGGCCCCG
ACCTTCAACGAGGTCTTCATCCCTCGAACAGAGGCGGACCTGTCGACCGGGCTCAAGTATCTTTCGCGTGCCAAC
AAGACGTGGCTGGCCAAGTCGGGCGGCCACGGATATTCCGTCACGCTCGAGTCGGTGCAGGATGCGGTCCTCATC
AACATGGGCAACTTCAACCGCATAGCCATGAACGGCTCCAAGGTGACGGTGGGAACGGGCGCGACCTTCGCCGAA
CTGGTCGACGCCGTCGCCGCCGCCGGCCGAGAGCTGACCGTCGGCGCGTGTCCATGCGTCGGCGCCATGGGCGCC
ATGCTCGGCGGCGGGCTCGGCCGTCTCGAGGGCCTGCACGGGCTGACGAGCGATGCGCTGCTGAGCGCCCGCGTC
GCGCTGTGGGACGGCAGCATCGTCGAGGCCTCGAAGAAGAAGAACGCGGACCTCTTCTGGGGCATCCGCGGCGCC
GGCCAGAACTTCGGCATCGTCTTCGAGGCCGTCTTCGACACGTACCCGGCCACCAACGGCGGCATGCAGTACAGC
GCAGACCTGACCTTCGGCCGCGACAAGCTCGAGGCCGTCGTCAACGTGACCAACACGCTGCTGGCTCCTGAGCTC
GACCCGGCCCTGGCCCTGGCCATCTCGCTGGCCAACGACCCGGAGACGCTCGAGCCCGTCGTGACGGTCAACATC
GTCTACCCCGGCCCGCCGGACAAGGGCCGGCGGTTCCGGCAGCTGTACTCGGCCCTGAGCTCCAACTACACGGAG
CAGATGACGGCGTGGGCCAAGCTGGCCGACGTTGCCCTGCCGGGCGTCGTCTTGGCCGGGTGCCCCAAGGGCAAG
CCGCACGACCAGTACAGCATCCTGACGGAGAACCTGTCGGCCTCGGCCCTGGCCTCGGCCCACGACTCGCTCTCG
GCCTTTGCGCGGCAGCACCCGGCCGCCAACGGGAGCAGCATCTTCATCGAGACGTTCGGCCAGCGGGCCCTCAAG
GCGATCCCGCAGGACAGCTCCGCCTTCCCGCACCGCAGCTACTTCCGCAACGCCGTCGTCTTCACCATGACGTAC
ACCGACGATGCCGTGGCCGAGGCCGCCGACGGCTGGGCCCGCCGCATGCGCAACACCTTTGCCCAGCCCAGCGTT
TCCGGCTACGGCGAGTGGCACGTCTACCAGAACTACGGACACGGGGACGAGCCGCCGTCGGCCTTGTACGGCTAC
GAGGGCTGGCGCCACGAGAGACTGACGAGGCTGAAGAACCGCTATGATCCGCACGGCTTCTTCGACGGATTCCAC
GCCATCCCGAGGAATCTCGCAGACTGGTCTTGA
Gene >Hirsu2|8188
ATGCTCGCACCCGTTTCTGCCCTGCTGCTCTTGGCGAGCGCAGCGTCCGGCCAGAACGGCTGGCCCGGCTCCATC
GCCAACGAGGTGAATGGGCCGTCGTGGCCGCAGTTCGCCAACGCCACCCAGCGCTGGTCGACGTACGCGGCCCCG
ACCTTCAACGAGGTCTTCATCCCTCGAACAGAGGCGGACCTGTCGACCGGGGTAAGTCCTGCAGCAAGAGACGGC
TCCAGGGACTCGAGGGTAACGGACGGCGCCTATGTTTGCAGCTCAAGTATCTTTCGCGTGCCAACAAGACGTGGC
TGGCCAAGTCGGGCGGCCACGGATATTCCGTCACGCTCGAGTCGGTGCAGGATGCGGTCCTCATCAACATGGGCA
ACTTCAACCGCATAGCCATGAACGGCTCCAAGGTGACGGTGGGAACGGGCGCGACCTTCGCCGAACTGGTCGACG
CCGTCGCCGCCGCCGGCCGAGAGCTGAGTGCGTCAGGCCGGTCCGGTCATGAGAAGGGGTCGAGGACGGGCAGCG
AGACTGACGGAGACGAACGGACACAGCCGTCGGCGCGTGTCCATGCGTCGGCGCCATGGGCGCCATGCTCGGCGG
CGGGCTCGGCCGTCTCGAGGGCCTGCACGGGCTGACGAGCGATGCGCTGCTGAGCGCCCGCGTCGCGCTGTGGGA
CGGCAGCATCGTCGAGGCCTCGAAGAAGAAGAACGCGGACCTCTTCTGGGGCATCCGCGGCGCCGGCCAGAACTT
CGGCATCGTCTTCGAGGCCGTCTTCGACACGTACCCGGCCACCAACGGCGGCATGCAGTACAGCGCAGACCTGAC
CTTCGGCCGCGACAAGCTCGAGGCCGTCGTCAACGTGACCAACACGCTGCTGGCTCCTGAGCTCGACCCGGCCCT
GGCCCTGGCCATCTCGCTGGCCAACGACCCGGAGACGCTCGAGGTGAGTCGAGGCTCGACCCCCGCGGCGCCGGA
CTGCGCGGCCAGAACTGACCGGAAGCCAGCCCGTCGTGACGGTCAACATCGTCTACCCCGGCCCGCCGGACAAGG
GCCGGCGGTTCCGGCAGCTGTACTCGGCCCTGAGCTCCAACTACACGGAGCAGATGACGGCGTGGGCCAAGCTGG
CCGACGTTGCCCTGCCGGGCGTCGTCTTGGCCGGGTGCCCCAAGGGCAAGCCGCACGACCAGTACAGCATCCTGA
CGGAGAACCTGTCGGCCTCGGCCCTGGCCTCGGCCCACGACTCGCTCTCGGCCTTTGCGCGGCAGCACCCGGCCG
CCAACGGGAGCAGCATCTTCATCGAGACGTTCGGCCAGCGGGCCCTCAAGGCGATCCCGCAGGACAGCTCCGCCT
TCCCGCACCGCAGCTACTTCCGCAACGCCGTCGTCTTCACCATGACGTACACCGACGATGCCGTGGCCGAGGCCG
CCGACGGCTGGGCCCGCCGCATGCGCAACACCTTTGCCCAGCCCAGCGTTTCCGGCTACGGCGAGTGGCACGTCT
ACCAGAACTACGGACACGGGGACGAGCCGCCGTCGGCCTTGTACGGCTACGAGGGCTGGCGCCACGAGAGACTGA
CGAGGCTGAAGAACCGCTATGATCCGCACGGCTTCTTCGACGGATTCCACGCCATCCCGAGGAATCTCGCAGACT
GGTCTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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