© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|8160 |
| Gene name | |
| Location | Contig_514:14018..16454 |
| Strand | + |
| Gene length (bp) | 2436 |
| Transcript length (bp) | 2301 |
| Coding sequence length (bp) | 2301 |
| Protein length (aa) | 767 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF09359 | VTC | VTC domain | 9.8E-89 | 211 | 486 |
| PF02656 | DUF202 | Domain of unknown function (DUF202) | 7.2E-11 | 648 | 709 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q02725|VTC3_YEAST | Vacuolar transporter chaperone 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC3 PE=1 SV=1 | 1 | 748 | 2.0E-141 |
| sp|O13718|VTC2_SCHPO | Vacuolar transporter chaperone 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vtc2 PE=1 SV=1 | 1 | 742 | 1.0E-139 |
| sp|P43585|VTC2_YEAST | Vacuolar transporter chaperone 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC2 PE=1 SV=1 | 1 | 747 | 9.0E-138 |
| sp|P78810|VTC4_SCHPO | Vacuolar transporter chaperone 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vtc4 PE=1 SV=2 | 1 | 746 | 1.0E-107 |
| sp|P47075|VTC4_YEAST | Vacuolar transporter chaperone 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC4 PE=1 SV=2 | 1 | 742 | 4.0E-104 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q02725|VTC3_YEAST | Vacuolar transporter chaperone 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC3 PE=1 SV=1 | 1 | 748 | 2.0E-141 |
| sp|O13718|VTC2_SCHPO | Vacuolar transporter chaperone 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vtc2 PE=1 SV=1 | 1 | 742 | 1.0E-139 |
| sp|P43585|VTC2_YEAST | Vacuolar transporter chaperone 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC2 PE=1 SV=1 | 1 | 747 | 9.0E-138 |
| sp|P78810|VTC4_SCHPO | Vacuolar transporter chaperone 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vtc4 PE=1 SV=2 | 1 | 746 | 1.0E-107 |
| sp|P47075|VTC4_YEAST | Vacuolar transporter chaperone 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC4 PE=1 SV=2 | 1 | 742 | 4.0E-104 |
| sp|Q9UR17|VTC1_SCHPO | Vacuolar transporter chaperone 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nrf1 PE=2 SV=1 | 643 | 745 | 1.0E-12 |
| sp|P40046|VTC1_YEAST | Vacuolar transporter chaperone 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC1 PE=1 SV=3 | 644 | 747 | 8.0E-08 |
| sp|Q94A21|SPX4_ARATH | SPX domain-containing protein 4 OS=Arabidopsis thaliana GN=SPX4 PE=2 SV=1 | 1 | 167 | 1.0E-07 |
| sp|Q7XEY9|SPX3_ORYSJ | SPX domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=SPX3 PE=2 SV=1 | 1 | 167 | 3.0E-07 |
| sp|A2Z6W1|SPX3_ORYSI | SPX domain-containing protein 3 OS=Oryza sativa subsp. indica GN=SPX3 PE=3 SV=1 | 1 | 167 | 3.0E-07 |
| sp|Q8LBH4|SPX1_ARATH | SPX domain-containing protein 1 OS=Arabidopsis thaliana GN=SPX1 PE=2 SV=2 | 1 | 164 | 5.0E-07 |
| sp|Q7Y0F6|SPX5_ORYSJ | SPX domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=SPX5 PE=2 SV=1 | 1 | 174 | 2.0E-06 |
| sp|A2XHU0|SPX5_ORYSI | SPX domain-containing protein 5 OS=Oryza sativa subsp. indica GN=SPX5 PE=3 SV=1 | 1 | 174 | 2.0E-06 |
| sp|Q5PP62|SPX3_ARATH | SPX domain-containing protein 3 OS=Arabidopsis thaliana GN=SPX3 PE=2 SV=1 | 1 | 164 | 6.0E-06 |
| sp|B8B4D0|SPX1_ORYSI | SPX domain-containing protein 1 OS=Oryza sativa subsp. indica GN=SPX1 PE=3 SV=1 | 1 | 209 | 7.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 56 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 682 | 704 | 22 |
| 2 | 724 | 746 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|8160 MRFGKTLREAVYEPWKDKYIDYGKLKDLLLEHKVDEEGAAAWTEDDENRFCDEIFNVQLEKVARFQQERVDSLKQ RVDAAFDKLKELAPAEGEEPAGRGEAANARLRELEKELDDITNEVRELKKYSSINYTGFLKIVKKHDRKRGDRYR IRPMMQLSLAQRPFNSEQGYSPLLNKLSIMYFAIRQQLEGGDQAPLDLESQGETHNGERYTAHKFWVHPDNLLEV KTLILRRLPALVYSEQSAKELDGKDSPAITSLYFDNRKFEIYSEKVDRQSEASSLRLRWYGQLSSRPQIFLEQKT ADAKGNSQESKFTIKDKWIKPFLNGETAMEKTMSKMERQGVPAEQIDSYRATVTKIQDLVRQKKLSPVLRANYVR TAFQKPNDDRVRISIDTDLAFIREDTLDADRPCRDPNDWHRLDIDNSNMSYPFKNINQSEVSKFPYAVLEIKLKE DGNRKRQSWVEDLMGSHLVHPAPRFSKFVHGVASLFEDYVNNLPFWLSDLETDIRKDPQTAFEEEEQRRAQRADD VMAVGSLIGGTRTSSYKAAQSSPVGETYLAERMAADSRASLTRTLSTRQAGGGEEGGESSAAPQQQGSALAGTGY GSLSSVLPALSLSKYARAKRAQRAQLPEGVVKPTEWIKNTGELKIEPKVWLANERTFLKWQHICLLQGSLAIGLY TAAGKDLVAEVMGIVYVAIAAFAGIWGYSMLHARRNMIMERSGRDFDNMFGPIIISLTLMAALVLNFVLQYRKFF EKLSDASGYEVAADEL* |
| Coding | >Hirsu2|8160 ATGCGGTTCGGCAAGACACTCCGGGAGGCCGTGTACGAGCCGTGGAAGGACAAGTACATCGACTACGGCAAGCTC AAGGACCTTTTGCTCGAGCACAAGGTGGACGAAGAGGGCGCGGCGGCGTGGACGGAGGACGACGAGAACCGCTTC TGCGACGAAATCTTCAACGTGCAGCTGGAGAAGGTGGCACGCTTCCAGCAGGAGCGCGTCGACTCGCTGAAGCAG CGCGTCGATGCCGCCTTCGACAAGCTCAAGGAGCTGGCCCCGGCCGAGGGCGAGGAGCCGGCCGGCCGGGGCGAG GCCGCCAACGCGCGCCTGCGCGAGCTGGAGAAGGAGCTGGACGATATCACCAACGAGGTGAGGGAGCTCAAAAAG TACAGCAGCATCAACTACACTGGCTTCCTCAAGATCGTCAAGAAGCACGACCGCAAGCGTGGCGACCGCTACCGC ATCCGGCCCATGATGCAGCTCAGCCTCGCCCAGCGGCCCTTCAACTCGGAGCAGGGCTACTCGCCGCTGCTCAAC AAGCTGTCTATCATGTACTTTGCCATCCGCCAGCAGCTCGAGGGCGGCGACCAGGCCCCTCTCGACCTGGAAAGC CAGGGCGAGACGCACAATGGCGAGAGATATACTGCCCACAAGTTCTGGGTGCACCCCGATAACCTCCTCGAGGTG AAGACGCTCATCCTCCGTCGGCTCCCGGCACTCGTCTACAGCGAGCAGTCTGCCAAGGAGCTGGACGGCAAGGAC TCGCCCGCCATCACCTCTCTCTACTTTGACAACCGCAAGTTTGAGATCTACTCGGAAAAGGTGGACCGGCAGTCC GAGGCGTCGTCTCTACGCCTGCGCTGGTATGGCCAGCTGAGCAGCCGGCCGCAGATCTTCCTCGAGCAGAAGACG GCCGACGCCAAGGGCAACAGCCAAGAGTCCAAGTTCACCATCAAGGACAAATGGATCAAGCCCTTCCTCAACGGA GAGACGGCCATGGAGAAGACGATGTCGAAGATGGAGCGGCAGGGCGTGCCGGCCGAGCAGATTGACAGCTACAGA GCCACCGTGACCAAGATCCAGGACTTGGTGCGGCAGAAGAAACTGTCGCCCGTGCTGAGAGCCAACTATGTCCGC ACGGCCTTCCAGAAACCCAACGACGACCGGGTCCGCATATCCATCGACACGGACCTGGCCTTCATCCGCGAAGAC ACGCTCGACGCCGACCGGCCGTGCCGTGACCCCAACGACTGGCACCGGCTGGACATTGACAACAGCAACATGTCG TACCCCTTCAAGAACATCAACCAGAGCGAGGTGTCGAAATTTCCGTACGCGGTGCTGGAGATCAAGCTCAAGGAA GACGGCAACCGCAAGCGCCAGTCGTGGGTGGAGGACCTGATGGGCTCGCATCTCGTCCACCCGGCGCCGCGATTC TCCAAGTTTGTGCACGGAGTGGCCTCCCTGTTCGAAGACTACGTCAACAACCTGCCCTTTTGGCTGAGCGATCTC GAGACGGACATCCGCAAGGACCCGCAGACGGCGTTCGAGGAGGAGGAGCAGCGGAGGGCGCAGCGGGCCGACGAC GTCATGGCCGTCGGCAGCCTCATCGGCGGGACCCGGACCAGCTCCTACAAGGCGGCCCAGAGCTCGCCGGTGGGG GAGACGTACCTGGCCGAGCGCATGGCGGCCGACTCGCGAGCGTCGCTGACGCGCACACTCAGCACCCGGCAGGCG GGCGGTGGCGAGGAGGGCGGCGAGTCGAGCGCGGCGCCGCAGCAACAGGGCTCGGCGCTGGCCGGCACCGGCTAC GGCAGCCTGTCCTCCGTCCTGCCCGCCCTCTCGCTGTCCAAGTACGCGCGGGCCAAGCGGGCGCAGAGGGCGCAG CTGCCCGAGGGGGTGGTGAAGCCGACGGAATGGATCAAGAACACGGGCGAGCTCAAGATCGAGCCCAAGGTCTGG CTTGCCAACGAGCGGACCTTTCTCAAGTGGCAGCACATCTGCCTCCTCCAGGGCAGCCTAGCCATCGGCCTCTAC ACGGCGGCCGGCAAGGACCTGGTGGCCGAGGTCATGGGCATCGTCTACGTCGCCATCGCGGCCTTTGCCGGCATC TGGGGCTACTCGATGCTGCACGCGCGGCGCAACATGATCATGGAGAGGAGCGGCAGGGACTTTGACAACATGTTT GGGCCCATCATCATCAGCCTCACCCTGATGGCCGCCCTCGTCCTCAACTTTGTCCTTCAGTACCGAAAGTTCTTT GAGAAGCTGAGCGACGCGAGCGGATACGAGGTGGCGGCAGATGAACTCTGA |
| Transcript | >Hirsu2|8160 ATGCGGTTCGGCAAGACACTCCGGGAGGCCGTGTACGAGCCGTGGAAGGACAAGTACATCGACTACGGCAAGCTC AAGGACCTTTTGCTCGAGCACAAGGTGGACGAAGAGGGCGCGGCGGCGTGGACGGAGGACGACGAGAACCGCTTC TGCGACGAAATCTTCAACGTGCAGCTGGAGAAGGTGGCACGCTTCCAGCAGGAGCGCGTCGACTCGCTGAAGCAG CGCGTCGATGCCGCCTTCGACAAGCTCAAGGAGCTGGCCCCGGCCGAGGGCGAGGAGCCGGCCGGCCGGGGCGAG GCCGCCAACGCGCGCCTGCGCGAGCTGGAGAAGGAGCTGGACGATATCACCAACGAGGTGAGGGAGCTCAAAAAG TACAGCAGCATCAACTACACTGGCTTCCTCAAGATCGTCAAGAAGCACGACCGCAAGCGTGGCGACCGCTACCGC ATCCGGCCCATGATGCAGCTCAGCCTCGCCCAGCGGCCCTTCAACTCGGAGCAGGGCTACTCGCCGCTGCTCAAC AAGCTGTCTATCATGTACTTTGCCATCCGCCAGCAGCTCGAGGGCGGCGACCAGGCCCCTCTCGACCTGGAAAGC CAGGGCGAGACGCACAATGGCGAGAGATATACTGCCCACAAGTTCTGGGTGCACCCCGATAACCTCCTCGAGGTG AAGACGCTCATCCTCCGTCGGCTCCCGGCACTCGTCTACAGCGAGCAGTCTGCCAAGGAGCTGGACGGCAAGGAC TCGCCCGCCATCACCTCTCTCTACTTTGACAACCGCAAGTTTGAGATCTACTCGGAAAAGGTGGACCGGCAGTCC GAGGCGTCGTCTCTACGCCTGCGCTGGTATGGCCAGCTGAGCAGCCGGCCGCAGATCTTCCTCGAGCAGAAGACG GCCGACGCCAAGGGCAACAGCCAAGAGTCCAAGTTCACCATCAAGGACAAATGGATCAAGCCCTTCCTCAACGGA GAGACGGCCATGGAGAAGACGATGTCGAAGATGGAGCGGCAGGGCGTGCCGGCCGAGCAGATTGACAGCTACAGA GCCACCGTGACCAAGATCCAGGACTTGGTGCGGCAGAAGAAACTGTCGCCCGTGCTGAGAGCCAACTATGTCCGC ACGGCCTTCCAGAAACCCAACGACGACCGGGTCCGCATATCCATCGACACGGACCTGGCCTTCATCCGCGAAGAC ACGCTCGACGCCGACCGGCCGTGCCGTGACCCCAACGACTGGCACCGGCTGGACATTGACAACAGCAACATGTCG TACCCCTTCAAGAACATCAACCAGAGCGAGGTGTCGAAATTTCCGTACGCGGTGCTGGAGATCAAGCTCAAGGAA GACGGCAACCGCAAGCGCCAGTCGTGGGTGGAGGACCTGATGGGCTCGCATCTCGTCCACCCGGCGCCGCGATTC TCCAAGTTTGTGCACGGAGTGGCCTCCCTGTTCGAAGACTACGTCAACAACCTGCCCTTTTGGCTGAGCGATCTC GAGACGGACATCCGCAAGGACCCGCAGACGGCGTTCGAGGAGGAGGAGCAGCGGAGGGCGCAGCGGGCCGACGAC GTCATGGCCGTCGGCAGCCTCATCGGCGGGACCCGGACCAGCTCCTACAAGGCGGCCCAGAGCTCGCCGGTGGGG GAGACGTACCTGGCCGAGCGCATGGCGGCCGACTCGCGAGCGTCGCTGACGCGCACACTCAGCACCCGGCAGGCG GGCGGTGGCGAGGAGGGCGGCGAGTCGAGCGCGGCGCCGCAGCAACAGGGCTCGGCGCTGGCCGGCACCGGCTAC GGCAGCCTGTCCTCCGTCCTGCCCGCCCTCTCGCTGTCCAAGTACGCGCGGGCCAAGCGGGCGCAGAGGGCGCAG CTGCCCGAGGGGGTGGTGAAGCCGACGGAATGGATCAAGAACACGGGCGAGCTCAAGATCGAGCCCAAGGTCTGG CTTGCCAACGAGCGGACCTTTCTCAAGTGGCAGCACATCTGCCTCCTCCAGGGCAGCCTAGCCATCGGCCTCTAC ACGGCGGCCGGCAAGGACCTGGTGGCCGAGGTCATGGGCATCGTCTACGTCGCCATCGCGGCCTTTGCCGGCATC TGGGGCTACTCGATGCTGCACGCGCGGCGCAACATGATCATGGAGAGGAGCGGCAGGGACTTTGACAACATGTTT GGGCCCATCATCATCAGCCTCACCCTGATGGCCGCCCTCGTCCTCAACTTTGTCCTTCAGTACCGAAAGTTCTTT GAGAAGCTGAGCGACGCGAGCGGATACGAGGTGGCGGCAGATGAACTCTGA |
| Gene | >Hirsu2|8160 ATGCGGTTCGGCAAGACACTCCGGGAGGCCGTGTACGAGCCGTGGAAGGACAAGTACATCGACTACGGCAAGCTC AAGGACCTTTTGCTCGAGCACAAGGTGGACGAAGAGGGCGCGGCGGCGTGGACGGAGGACGACGAGAACCGCTTC TGCGACGAAATCTTCAACGTGCAGCTGGAGAAGGTGGCACGCTTCCAGCAGGAGCGCGTCGACTCGCTGAAGCAG CGCGTCGATGCCGCCTTCGACAAGCTCAAGGAGCTGGCCCCGGCCGAGGGCGAGGAGCCGGCCGGCCGGGGCGAG GCCGCCAACGCGCGCCTGCGCGAGCTGGAGAAGGAGCTGGACGATATCACCAACGAGGTGAGGGAGCTCAAAAAG TACAGCAGCATCAACTACACTGGCTTCCTCAAGATCGTCAAGAAGCACGACCGCAAGCGTGGCGACCGCTACCGC ATCCGGCCCATGATGCAGCTCAGCCTCGCCCAGCGGCCCTTCAACTCGGAGCAGGGCTACTCGCCGCTGCTCAAC AAGCTGTCTATCATGTACTTTGCCATCCGCCAGCAGCTCGAGGGCGGCGACCAGGCCCCTCTCGACCTGGAAAGC CAGGGCGAGACGCACAATGGCGAGAGATATACTGCCCACAAGTGTAAGCTGCCCGACCCTGACTGGCGCTGTTTC GTATTGACGACTCGTCCTCGGTAGTCTGGGTGCACCCCGATAACCTCCTCGAGGTGAAGACGCTCATCCTCCGTC GGCTCCCGGCACTCGTCTACAGCGAGCAGTCTGCCAAGGAGCTGGACGGCAAGGACTCGCCCGCCATCACCTCTC TCTACTTTGACAACCGCAAGTTTGAGATCTACTCGGAAAAGGTGGACCGGCAGTCCGAGGCGTCGTCTCTACGCC TGCGCTGGTATGGCCAGCTGAGCAGCCGGCCGCAGATCTTCCTCGAGCAGAAGACGGCCGACGCCAAGGGCAACA GCCAAGAGTCCAAGTTCACCATCAAGGACAAATGGATCAAGCCCTTCCTCAACGGAGAGACGGCCATGGAGAAGA CGATGTCGAAGATGGAGCGGCAGGGCGTGCCGGCCGAGCAGATTGACAGCTACAGAGCCACCGTGACCAAGATCC AGGACTTGGTGCGGCAGAAGAAACTGTCGCCCGTGCTGAGAGCCAACTATGTCCGCACGGCCTTCCAGAAACCCA ACGACGACCGGGTCCGCATATCCATCGACACGGACCTGGCCTTCATCCGCGAAGACACGCTCGACGCCGACCGGC CGTGCCGTGACCCCAACGACTGGCACCGGCTGGACATTGACAACAGCAACATGTCGTACCCCTTCAAGAACATCA ACCAGAGCGAGGTGTCGAAATTTCCGTACGCGGTGCTGGAGATCAAGCTCAAGGAAGACGGCAACCGCAAGCGCC AGTCGTGGGTGGAGGACCTGATGGGCTCGCATCTCGTCCACCCGGCGCCGCGATTCTCCAAGTTTGTGCACGGAG TGGCCTCCCTGTTCGAAGACTACGTCAACAACCTGCCCTTTTGGCTGAGCGATCTCGAGACGGACATCCGCAAGG ACCCGCAGACGGCGTTCGAGGAGGAGGAGCAGCGGAGGGCGCAGCGGGCCGACGACGTCATGGCCGTCGGCAGCC TCATCGGCGGGACCCGGACCAGCTCCTACAAGGCGGCCCAGAGCTCGCCGGTGGGGGAGACGTACCTGGCCGAGC GCATGGCGGCCGACTCGCGAGCGTCGCTGACGCGCACACTCAGCACCCGGCAGGCGGGCGGTGGCGAGGAGGGCG GCGAGTCGAGCGCGGCGCCGCAGCAACAGGGCTCGGCGCTGGCCGGCACCGGCTACGGCAGCCTGTCCTCCGTCC TGCCCGCCCTCTCGCTGTCCAAGTACGCGCGGGCCAAGCGGGCGCAGAGGGCGCAGCTGCCCGAGGGGGTGGTGA AGCCGACGGAATGGATCAAGAACACGGGCGAGCTCAAGATCGAGCCCAAGGTCTGGCTTGCCAACGAGCGGACCT TTCTCAAGTGGCAGCACATCTGCCTCCTCCAGGGCAGCCTAGCCATCGGCCTCTACACGGCGGCCGGCAAGGACC TGGTGGCCGAGGTCATGGGCATCGTCTACGTCGCCATCGCGGCCTTTGCCGGCATCTGGGGCTACTCGATGCTGC ACGCGCGGCGCAACATGATCATGGAGAGGAGCGGCAGGGACTTTGACAACATGTTTGGGCCCATCATCATCAGCC TCACCCTGATGGCCGCCCTCGTCCTCAACTTTGTCCTTCAGGTAAGCAAAGCGGCAGCAGGGAGAGCAGAGGAGG GGAGAGGAGGAGAGCCTGGAGAGGCACTGACTGACGGAGCCATAGTACCGAAAGTTCTTTGAGAAGCTGAGCGAC GCGAGCGGATACGAGGTGGCGGCAGATGAACTCTGA |