Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8160
Gene name
LocationContig_514:14018..16454
Strand+
Gene length (bp)2436
Transcript length (bp)2301
Coding sequence length (bp)2301
Protein length (aa) 767

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09359 VTC VTC domain 2.4E-88 211 486
PF02656 DUF202 Domain of unknown function (DUF202) 6.8E-11 648 709

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q02725|VTC3_YEAST Vacuolar transporter chaperone 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC3 PE=1 SV=1 1 748 2.0E-141
sp|O13718|VTC2_SCHPO Vacuolar transporter chaperone 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vtc2 PE=1 SV=1 1 742 1.0E-139
sp|P43585|VTC2_YEAST Vacuolar transporter chaperone 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC2 PE=1 SV=1 1 747 9.0E-138
sp|P78810|VTC4_SCHPO Vacuolar transporter chaperone 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vtc4 PE=1 SV=2 1 746 1.0E-107
sp|P47075|VTC4_YEAST Vacuolar transporter chaperone 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC4 PE=1 SV=2 1 742 4.0E-104
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q02725|VTC3_YEAST Vacuolar transporter chaperone 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC3 PE=1 SV=1 1 748 2.0E-141
sp|O13718|VTC2_SCHPO Vacuolar transporter chaperone 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vtc2 PE=1 SV=1 1 742 1.0E-139
sp|P43585|VTC2_YEAST Vacuolar transporter chaperone 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC2 PE=1 SV=1 1 747 9.0E-138
sp|P78810|VTC4_SCHPO Vacuolar transporter chaperone 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vtc4 PE=1 SV=2 1 746 1.0E-107
sp|P47075|VTC4_YEAST Vacuolar transporter chaperone 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC4 PE=1 SV=2 1 742 4.0E-104
sp|Q9UR17|VTC1_SCHPO Vacuolar transporter chaperone 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nrf1 PE=2 SV=1 643 745 1.0E-12
sp|P40046|VTC1_YEAST Vacuolar transporter chaperone 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC1 PE=1 SV=3 644 747 8.0E-08
sp|Q94A21|SPX4_ARATH SPX domain-containing protein 4 OS=Arabidopsis thaliana GN=SPX4 PE=2 SV=1 1 167 1.0E-07
sp|Q7XEY9|SPX3_ORYSJ SPX domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=SPX3 PE=2 SV=1 1 167 3.0E-07
sp|A2Z6W1|SPX3_ORYSI SPX domain-containing protein 3 OS=Oryza sativa subsp. indica GN=SPX3 PE=3 SV=1 1 167 3.0E-07
sp|Q8LBH4|SPX1_ARATH SPX domain-containing protein 1 OS=Arabidopsis thaliana GN=SPX1 PE=2 SV=2 1 164 5.0E-07
sp|Q7Y0F6|SPX5_ORYSJ SPX domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=SPX5 PE=2 SV=1 1 174 2.0E-06
sp|A2XHU0|SPX5_ORYSI SPX domain-containing protein 5 OS=Oryza sativa subsp. indica GN=SPX5 PE=3 SV=1 1 174 2.0E-06
sp|Q5PP62|SPX3_ARATH SPX domain-containing protein 3 OS=Arabidopsis thaliana GN=SPX3 PE=2 SV=1 1 164 6.0E-06
sp|B8B4D0|SPX1_ORYSI SPX domain-containing protein 1 OS=Oryza sativa subsp. indica GN=SPX1 PE=3 SV=1 1 209 7.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 56 0.45

Transmembrane Domains

Domain # Start End Length
1 682 704 22
2 724 746 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8160
MRFGKTLREAVYEPWKDKYIDYGKLKDLLLEHKVDEEGAAAWTEDDENRFCDEIFNVQLEKVARFQQERVDSLKQ
RVDAAFDKLKELAPAEGEEPAGRGEAANARLRELEKELDDITNEVRELKKYSSINYTGFLKIVKKHDRKRGDRYR
IRPMMQLSLAQRPFNSEQGYSPLLNKLSIMYFAIRQQLEGGDQAPLDLESQGETHNGERYTAHKFWVHPDNLLEV
KTLILRRLPALVYSEQSAKELDGKDSPAITSLYFDNRKFEIYSEKVDRQSEASSLRLRWYGQLSSRPQIFLEQKT
ADAKGNSQESKFTIKDKWIKPFLNGETAMEKTMSKMERQGVPAEQIDSYRATVTKIQDLVRQKKLSPVLRANYVR
TAFQKPNDDRVRISIDTDLAFIREDTLDADRPCRDPNDWHRLDIDNSNMSYPFKNINQSEVSKFPYAVLEIKLKE
DGNRKRQSWVEDLMGSHLVHPAPRFSKFVHGVASLFEDYVNNLPFWLSDLETDIRKDPQTAFEEEEQRRAQRADD
VMAVGSLIGGTRTSSYKAAQSSPVGETYLAERMAADSRASLTRTLSTRQAGGGEEGGESSAAPQQQGSALAGTGY
GSLSSVLPALSLSKYARAKRAQRAQLPEGVVKPTEWIKNTGELKIEPKVWLANERTFLKWQHICLLQGSLAIGLY
TAAGKDLVAEVMGIVYVAIAAFAGIWGYSMLHARRNMIMERSGRDFDNMFGPIIISLTLMAALVLNFVLQYRKFF
EKLSDASGYEVAADEL*
Coding >Hirsu2|8160
ATGCGGTTCGGCAAGACACTCCGGGAGGCCGTGTACGAGCCGTGGAAGGACAAGTACATCGACTACGGCAAGCTC
AAGGACCTTTTGCTCGAGCACAAGGTGGACGAAGAGGGCGCGGCGGCGTGGACGGAGGACGACGAGAACCGCTTC
TGCGACGAAATCTTCAACGTGCAGCTGGAGAAGGTGGCACGCTTCCAGCAGGAGCGCGTCGACTCGCTGAAGCAG
CGCGTCGATGCCGCCTTCGACAAGCTCAAGGAGCTGGCCCCGGCCGAGGGCGAGGAGCCGGCCGGCCGGGGCGAG
GCCGCCAACGCGCGCCTGCGCGAGCTGGAGAAGGAGCTGGACGATATCACCAACGAGGTGAGGGAGCTCAAAAAG
TACAGCAGCATCAACTACACTGGCTTCCTCAAGATCGTCAAGAAGCACGACCGCAAGCGTGGCGACCGCTACCGC
ATCCGGCCCATGATGCAGCTCAGCCTCGCCCAGCGGCCCTTCAACTCGGAGCAGGGCTACTCGCCGCTGCTCAAC
AAGCTGTCTATCATGTACTTTGCCATCCGCCAGCAGCTCGAGGGCGGCGACCAGGCCCCTCTCGACCTGGAAAGC
CAGGGCGAGACGCACAATGGCGAGAGATATACTGCCCACAAGTTCTGGGTGCACCCCGATAACCTCCTCGAGGTG
AAGACGCTCATCCTCCGTCGGCTCCCGGCACTCGTCTACAGCGAGCAGTCTGCCAAGGAGCTGGACGGCAAGGAC
TCGCCCGCCATCACCTCTCTCTACTTTGACAACCGCAAGTTTGAGATCTACTCGGAAAAGGTGGACCGGCAGTCC
GAGGCGTCGTCTCTACGCCTGCGCTGGTATGGCCAGCTGAGCAGCCGGCCGCAGATCTTCCTCGAGCAGAAGACG
GCCGACGCCAAGGGCAACAGCCAAGAGTCCAAGTTCACCATCAAGGACAAATGGATCAAGCCCTTCCTCAACGGA
GAGACGGCCATGGAGAAGACGATGTCGAAGATGGAGCGGCAGGGCGTGCCGGCCGAGCAGATTGACAGCTACAGA
GCCACCGTGACCAAGATCCAGGACTTGGTGCGGCAGAAGAAACTGTCGCCCGTGCTGAGAGCCAACTATGTCCGC
ACGGCCTTCCAGAAACCCAACGACGACCGGGTCCGCATATCCATCGACACGGACCTGGCCTTCATCCGCGAAGAC
ACGCTCGACGCCGACCGGCCGTGCCGTGACCCCAACGACTGGCACCGGCTGGACATTGACAACAGCAACATGTCG
TACCCCTTCAAGAACATCAACCAGAGCGAGGTGTCGAAATTTCCGTACGCGGTGCTGGAGATCAAGCTCAAGGAA
GACGGCAACCGCAAGCGCCAGTCGTGGGTGGAGGACCTGATGGGCTCGCATCTCGTCCACCCGGCGCCGCGATTC
TCCAAGTTTGTGCACGGAGTGGCCTCCCTGTTCGAAGACTACGTCAACAACCTGCCCTTTTGGCTGAGCGATCTC
GAGACGGACATCCGCAAGGACCCGCAGACGGCGTTCGAGGAGGAGGAGCAGCGGAGGGCGCAGCGGGCCGACGAC
GTCATGGCCGTCGGCAGCCTCATCGGCGGGACCCGGACCAGCTCCTACAAGGCGGCCCAGAGCTCGCCGGTGGGG
GAGACGTACCTGGCCGAGCGCATGGCGGCCGACTCGCGAGCGTCGCTGACGCGCACACTCAGCACCCGGCAGGCG
GGCGGTGGCGAGGAGGGCGGCGAGTCGAGCGCGGCGCCGCAGCAACAGGGCTCGGCGCTGGCCGGCACCGGCTAC
GGCAGCCTGTCCTCCGTCCTGCCCGCCCTCTCGCTGTCCAAGTACGCGCGGGCCAAGCGGGCGCAGAGGGCGCAG
CTGCCCGAGGGGGTGGTGAAGCCGACGGAATGGATCAAGAACACGGGCGAGCTCAAGATCGAGCCCAAGGTCTGG
CTTGCCAACGAGCGGACCTTTCTCAAGTGGCAGCACATCTGCCTCCTCCAGGGCAGCCTAGCCATCGGCCTCTAC
ACGGCGGCCGGCAAGGACCTGGTGGCCGAGGTCATGGGCATCGTCTACGTCGCCATCGCGGCCTTTGCCGGCATC
TGGGGCTACTCGATGCTGCACGCGCGGCGCAACATGATCATGGAGAGGAGCGGCAGGGACTTTGACAACATGTTT
GGGCCCATCATCATCAGCCTCACCCTGATGGCCGCCCTCGTCCTCAACTTTGTCCTTCAGTACCGAAAGTTCTTT
GAGAAGCTGAGCGACGCGAGCGGATACGAGGTGGCGGCAGATGAACTCTGA
Transcript >Hirsu2|8160
ATGCGGTTCGGCAAGACACTCCGGGAGGCCGTGTACGAGCCGTGGAAGGACAAGTACATCGACTACGGCAAGCTC
AAGGACCTTTTGCTCGAGCACAAGGTGGACGAAGAGGGCGCGGCGGCGTGGACGGAGGACGACGAGAACCGCTTC
TGCGACGAAATCTTCAACGTGCAGCTGGAGAAGGTGGCACGCTTCCAGCAGGAGCGCGTCGACTCGCTGAAGCAG
CGCGTCGATGCCGCCTTCGACAAGCTCAAGGAGCTGGCCCCGGCCGAGGGCGAGGAGCCGGCCGGCCGGGGCGAG
GCCGCCAACGCGCGCCTGCGCGAGCTGGAGAAGGAGCTGGACGATATCACCAACGAGGTGAGGGAGCTCAAAAAG
TACAGCAGCATCAACTACACTGGCTTCCTCAAGATCGTCAAGAAGCACGACCGCAAGCGTGGCGACCGCTACCGC
ATCCGGCCCATGATGCAGCTCAGCCTCGCCCAGCGGCCCTTCAACTCGGAGCAGGGCTACTCGCCGCTGCTCAAC
AAGCTGTCTATCATGTACTTTGCCATCCGCCAGCAGCTCGAGGGCGGCGACCAGGCCCCTCTCGACCTGGAAAGC
CAGGGCGAGACGCACAATGGCGAGAGATATACTGCCCACAAGTTCTGGGTGCACCCCGATAACCTCCTCGAGGTG
AAGACGCTCATCCTCCGTCGGCTCCCGGCACTCGTCTACAGCGAGCAGTCTGCCAAGGAGCTGGACGGCAAGGAC
TCGCCCGCCATCACCTCTCTCTACTTTGACAACCGCAAGTTTGAGATCTACTCGGAAAAGGTGGACCGGCAGTCC
GAGGCGTCGTCTCTACGCCTGCGCTGGTATGGCCAGCTGAGCAGCCGGCCGCAGATCTTCCTCGAGCAGAAGACG
GCCGACGCCAAGGGCAACAGCCAAGAGTCCAAGTTCACCATCAAGGACAAATGGATCAAGCCCTTCCTCAACGGA
GAGACGGCCATGGAGAAGACGATGTCGAAGATGGAGCGGCAGGGCGTGCCGGCCGAGCAGATTGACAGCTACAGA
GCCACCGTGACCAAGATCCAGGACTTGGTGCGGCAGAAGAAACTGTCGCCCGTGCTGAGAGCCAACTATGTCCGC
ACGGCCTTCCAGAAACCCAACGACGACCGGGTCCGCATATCCATCGACACGGACCTGGCCTTCATCCGCGAAGAC
ACGCTCGACGCCGACCGGCCGTGCCGTGACCCCAACGACTGGCACCGGCTGGACATTGACAACAGCAACATGTCG
TACCCCTTCAAGAACATCAACCAGAGCGAGGTGTCGAAATTTCCGTACGCGGTGCTGGAGATCAAGCTCAAGGAA
GACGGCAACCGCAAGCGCCAGTCGTGGGTGGAGGACCTGATGGGCTCGCATCTCGTCCACCCGGCGCCGCGATTC
TCCAAGTTTGTGCACGGAGTGGCCTCCCTGTTCGAAGACTACGTCAACAACCTGCCCTTTTGGCTGAGCGATCTC
GAGACGGACATCCGCAAGGACCCGCAGACGGCGTTCGAGGAGGAGGAGCAGCGGAGGGCGCAGCGGGCCGACGAC
GTCATGGCCGTCGGCAGCCTCATCGGCGGGACCCGGACCAGCTCCTACAAGGCGGCCCAGAGCTCGCCGGTGGGG
GAGACGTACCTGGCCGAGCGCATGGCGGCCGACTCGCGAGCGTCGCTGACGCGCACACTCAGCACCCGGCAGGCG
GGCGGTGGCGAGGAGGGCGGCGAGTCGAGCGCGGCGCCGCAGCAACAGGGCTCGGCGCTGGCCGGCACCGGCTAC
GGCAGCCTGTCCTCCGTCCTGCCCGCCCTCTCGCTGTCCAAGTACGCGCGGGCCAAGCGGGCGCAGAGGGCGCAG
CTGCCCGAGGGGGTGGTGAAGCCGACGGAATGGATCAAGAACACGGGCGAGCTCAAGATCGAGCCCAAGGTCTGG
CTTGCCAACGAGCGGACCTTTCTCAAGTGGCAGCACATCTGCCTCCTCCAGGGCAGCCTAGCCATCGGCCTCTAC
ACGGCGGCCGGCAAGGACCTGGTGGCCGAGGTCATGGGCATCGTCTACGTCGCCATCGCGGCCTTTGCCGGCATC
TGGGGCTACTCGATGCTGCACGCGCGGCGCAACATGATCATGGAGAGGAGCGGCAGGGACTTTGACAACATGTTT
GGGCCCATCATCATCAGCCTCACCCTGATGGCCGCCCTCGTCCTCAACTTTGTCCTTCAGTACCGAAAGTTCTTT
GAGAAGCTGAGCGACGCGAGCGGATACGAGGTGGCGGCAGATGAACTCTGA
Gene >Hirsu2|8160
ATGCGGTTCGGCAAGACACTCCGGGAGGCCGTGTACGAGCCGTGGAAGGACAAGTACATCGACTACGGCAAGCTC
AAGGACCTTTTGCTCGAGCACAAGGTGGACGAAGAGGGCGCGGCGGCGTGGACGGAGGACGACGAGAACCGCTTC
TGCGACGAAATCTTCAACGTGCAGCTGGAGAAGGTGGCACGCTTCCAGCAGGAGCGCGTCGACTCGCTGAAGCAG
CGCGTCGATGCCGCCTTCGACAAGCTCAAGGAGCTGGCCCCGGCCGAGGGCGAGGAGCCGGCCGGCCGGGGCGAG
GCCGCCAACGCGCGCCTGCGCGAGCTGGAGAAGGAGCTGGACGATATCACCAACGAGGTGAGGGAGCTCAAAAAG
TACAGCAGCATCAACTACACTGGCTTCCTCAAGATCGTCAAGAAGCACGACCGCAAGCGTGGCGACCGCTACCGC
ATCCGGCCCATGATGCAGCTCAGCCTCGCCCAGCGGCCCTTCAACTCGGAGCAGGGCTACTCGCCGCTGCTCAAC
AAGCTGTCTATCATGTACTTTGCCATCCGCCAGCAGCTCGAGGGCGGCGACCAGGCCCCTCTCGACCTGGAAAGC
CAGGGCGAGACGCACAATGGCGAGAGATATACTGCCCACAAGTGTAAGCTGCCCGACCCTGACTGGCGCTGTTTC
GTATTGACGACTCGTCCTCGGTAGTCTGGGTGCACCCCGATAACCTCCTCGAGGTGAAGACGCTCATCCTCCGTC
GGCTCCCGGCACTCGTCTACAGCGAGCAGTCTGCCAAGGAGCTGGACGGCAAGGACTCGCCCGCCATCACCTCTC
TCTACTTTGACAACCGCAAGTTTGAGATCTACTCGGAAAAGGTGGACCGGCAGTCCGAGGCGTCGTCTCTACGCC
TGCGCTGGTATGGCCAGCTGAGCAGCCGGCCGCAGATCTTCCTCGAGCAGAAGACGGCCGACGCCAAGGGCAACA
GCCAAGAGTCCAAGTTCACCATCAAGGACAAATGGATCAAGCCCTTCCTCAACGGAGAGACGGCCATGGAGAAGA
CGATGTCGAAGATGGAGCGGCAGGGCGTGCCGGCCGAGCAGATTGACAGCTACAGAGCCACCGTGACCAAGATCC
AGGACTTGGTGCGGCAGAAGAAACTGTCGCCCGTGCTGAGAGCCAACTATGTCCGCACGGCCTTCCAGAAACCCA
ACGACGACCGGGTCCGCATATCCATCGACACGGACCTGGCCTTCATCCGCGAAGACACGCTCGACGCCGACCGGC
CGTGCCGTGACCCCAACGACTGGCACCGGCTGGACATTGACAACAGCAACATGTCGTACCCCTTCAAGAACATCA
ACCAGAGCGAGGTGTCGAAATTTCCGTACGCGGTGCTGGAGATCAAGCTCAAGGAAGACGGCAACCGCAAGCGCC
AGTCGTGGGTGGAGGACCTGATGGGCTCGCATCTCGTCCACCCGGCGCCGCGATTCTCCAAGTTTGTGCACGGAG
TGGCCTCCCTGTTCGAAGACTACGTCAACAACCTGCCCTTTTGGCTGAGCGATCTCGAGACGGACATCCGCAAGG
ACCCGCAGACGGCGTTCGAGGAGGAGGAGCAGCGGAGGGCGCAGCGGGCCGACGACGTCATGGCCGTCGGCAGCC
TCATCGGCGGGACCCGGACCAGCTCCTACAAGGCGGCCCAGAGCTCGCCGGTGGGGGAGACGTACCTGGCCGAGC
GCATGGCGGCCGACTCGCGAGCGTCGCTGACGCGCACACTCAGCACCCGGCAGGCGGGCGGTGGCGAGGAGGGCG
GCGAGTCGAGCGCGGCGCCGCAGCAACAGGGCTCGGCGCTGGCCGGCACCGGCTACGGCAGCCTGTCCTCCGTCC
TGCCCGCCCTCTCGCTGTCCAAGTACGCGCGGGCCAAGCGGGCGCAGAGGGCGCAGCTGCCCGAGGGGGTGGTGA
AGCCGACGGAATGGATCAAGAACACGGGCGAGCTCAAGATCGAGCCCAAGGTCTGGCTTGCCAACGAGCGGACCT
TTCTCAAGTGGCAGCACATCTGCCTCCTCCAGGGCAGCCTAGCCATCGGCCTCTACACGGCGGCCGGCAAGGACC
TGGTGGCCGAGGTCATGGGCATCGTCTACGTCGCCATCGCGGCCTTTGCCGGCATCTGGGGCTACTCGATGCTGC
ACGCGCGGCGCAACATGATCATGGAGAGGAGCGGCAGGGACTTTGACAACATGTTTGGGCCCATCATCATCAGCC
TCACCCTGATGGCCGCCCTCGTCCTCAACTTTGTCCTTCAGGTAAGCAAAGCGGCAGCAGGGAGAGCAGAGGAGG
GGAGAGGAGGAGAGCCTGGAGAGGCACTGACTGACGGAGCCATAGTACCGAAAGTTCTTTGAGAAGCTGAGCGAC
GCGAGCGGATACGAGGTGGCGGCAGATGAACTCTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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