Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8132
Gene name
LocationContig_510:16320..16818
Strand-
Gene length (bp)498
Transcript length (bp)498
Coding sequence length (bp)498
Protein length (aa) 166

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1017 0.0362 0.9669 0.0944 0.0687 0.0167 0.1176 0.1118 0.1156 0.0031

SignalP

SignalP signal predicted Location Score
Yes 1 - 19 0.999606

Transmembrane Domains

Domain # Start End Length
1 4 26 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6274
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|7395
Ophiocordyceps australis map64 (Brazil) OphauB2|1741
Ophiocordyceps australis map64 (Brazil) OphauB2|2838
Ophiocordyceps subramaniannii Hirsu2|8132 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8132
MTLATVIITAAALIPVVLAGSYCINAERHRCQWTDCGQDNSESSRFDRLYATTKGLFWKRICRGGEGTYLGDSCC
SHYGGRCALFWQHKNLWCEPEDAKSVPDYDGPRARANWPVSEGGVEDDKCKAAGGKVQTTAARSLLGDFSYSTCE
CHGQMFFEGRCVSMN*
Coding >Hirsu2|8132
ATGACCTTGGCCACCGTTATTATTACTGCAGCTGCCTTAATCCCGGTCGTTCTAGCTGGCAGTTATTGCATCAAC
GCCGAACGCCACAGATGCCAATGGACAGACTGCGGCCAAGACAACAGTGAATCCTCTCGATTCGACCGCCTTTAT
GCGACGACAAAAGGCTTGTTCTGGAAACGGATTTGCCGAGGCGGGGAAGGCACCTACCTTGGTGATAGTTGCTGC
AGTCACTACGGTGGTCGTTGCGCTTTGTTTTGGCAGCACAAGAATCTCTGGTGCGAGCCCGAGGATGCAAAGTCT
GTTCCTGACTACGATGGGCCGCGGGCACGGGCAAATTGGCCTGTCAGCGAAGGGGGTGTTGAGGACGATAAGTGC
AAAGCAGCCGGTGGTAAGGTTCAGACCACTGCTGCAAGGTCCCTTTTGGGCGACTTTTCTTATTCGACGTGCGAA
TGTCACGGACAAATGTTTTTCGAAGGACGCTGCGTCTCCATGAATTAG
Transcript >Hirsu2|8132
ATGACCTTGGCCACCGTTATTATTACTGCAGCTGCCTTAATCCCGGTCGTTCTAGCTGGCAGTTATTGCATCAAC
GCCGAACGCCACAGATGCCAATGGACAGACTGCGGCCAAGACAACAGTGAATCCTCTCGATTCGACCGCCTTTAT
GCGACGACAAAAGGCTTGTTCTGGAAACGGATTTGCCGAGGCGGGGAAGGCACCTACCTTGGTGATAGTTGCTGC
AGTCACTACGGTGGTCGTTGCGCTTTGTTTTGGCAGCACAAGAATCTCTGGTGCGAGCCCGAGGATGCAAAGTCT
GTTCCTGACTACGATGGGCCGCGGGCACGGGCAAATTGGCCTGTCAGCGAAGGGGGTGTTGAGGACGATAAGTGC
AAAGCAGCCGGTGGTAAGGTTCAGACCACTGCTGCAAGGTCCCTTTTGGGCGACTTTTCTTATTCGACGTGCGAA
TGTCACGGACAAATGTTTTTCGAAGGACGCTGCGTCTCCATGAATTAG
Gene >Hirsu2|8132
ATGACCTTGGCCACCGTTATTATTACTGCAGCTGCCTTAATCCCGGTCGTTCTAGCTGGCAGTTATTGCATCAAC
GCCGAACGCCACAGATGCCAATGGACAGACTGCGGCCAAGACAACAGTGAATCCTCTCGATTCGACCGCCTTTAT
GCGACGACAAAAGGCTTGTTCTGGAAACGGATTTGCCGAGGCGGGGAAGGCACCTACCTTGGTGATAGTTGCTGC
AGTCACTACGGTGGTCGTTGCGCTTTGTTTTGGCAGCACAAGAATCTCTGGTGCGAGCCCGAGGATGCAAAGTCT
GTTCCTGACTACGATGGGCCGCGGGCACGGGCAAATTGGCCTGTCAGCGAAGGGGGTGTTGAGGACGATAAGTGC
AAAGCAGCCGGTGGTAAGGTTCAGACCACTGCTGCAAGGTCCCTTTTGGGCGACTTTTCTTATTCGACGTGCGAA
TGTCACGGACAAATGTTTTTCGAAGGACGCTGCGTCTCCATGAATTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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