Protein ID | Hirsu2|8132 |
Gene name | |
Location | Contig_510:16320..16818 |
Strand | - |
Gene length (bp) | 498 |
Transcript length (bp) | 498 |
Coding sequence length (bp) | 498 |
Protein length (aa) | 166 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1017 | 0.0362 | 0.9669 | 0.0944 | 0.0687 | 0.0167 | 0.1176 | 0.1118 | 0.1156 | 0.0031 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 19 | 0.999606 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 4 | 26 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 6274 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|8132 MTLATVIITAAALIPVVLAGSYCINAERHRCQWTDCGQDNSESSRFDRLYATTKGLFWKRICRGGEGTYLGDSCC SHYGGRCALFWQHKNLWCEPEDAKSVPDYDGPRARANWPVSEGGVEDDKCKAAGGKVQTTAARSLLGDFSYSTCE CHGQMFFEGRCVSMN* |
Coding | >Hirsu2|8132 ATGACCTTGGCCACCGTTATTATTACTGCAGCTGCCTTAATCCCGGTCGTTCTAGCTGGCAGTTATTGCATCAAC GCCGAACGCCACAGATGCCAATGGACAGACTGCGGCCAAGACAACAGTGAATCCTCTCGATTCGACCGCCTTTAT GCGACGACAAAAGGCTTGTTCTGGAAACGGATTTGCCGAGGCGGGGAAGGCACCTACCTTGGTGATAGTTGCTGC AGTCACTACGGTGGTCGTTGCGCTTTGTTTTGGCAGCACAAGAATCTCTGGTGCGAGCCCGAGGATGCAAAGTCT GTTCCTGACTACGATGGGCCGCGGGCACGGGCAAATTGGCCTGTCAGCGAAGGGGGTGTTGAGGACGATAAGTGC AAAGCAGCCGGTGGTAAGGTTCAGACCACTGCTGCAAGGTCCCTTTTGGGCGACTTTTCTTATTCGACGTGCGAA TGTCACGGACAAATGTTTTTCGAAGGACGCTGCGTCTCCATGAATTAG |
Transcript | >Hirsu2|8132 ATGACCTTGGCCACCGTTATTATTACTGCAGCTGCCTTAATCCCGGTCGTTCTAGCTGGCAGTTATTGCATCAAC GCCGAACGCCACAGATGCCAATGGACAGACTGCGGCCAAGACAACAGTGAATCCTCTCGATTCGACCGCCTTTAT GCGACGACAAAAGGCTTGTTCTGGAAACGGATTTGCCGAGGCGGGGAAGGCACCTACCTTGGTGATAGTTGCTGC AGTCACTACGGTGGTCGTTGCGCTTTGTTTTGGCAGCACAAGAATCTCTGGTGCGAGCCCGAGGATGCAAAGTCT GTTCCTGACTACGATGGGCCGCGGGCACGGGCAAATTGGCCTGTCAGCGAAGGGGGTGTTGAGGACGATAAGTGC AAAGCAGCCGGTGGTAAGGTTCAGACCACTGCTGCAAGGTCCCTTTTGGGCGACTTTTCTTATTCGACGTGCGAA TGTCACGGACAAATGTTTTTCGAAGGACGCTGCGTCTCCATGAATTAG |
Gene | >Hirsu2|8132 ATGACCTTGGCCACCGTTATTATTACTGCAGCTGCCTTAATCCCGGTCGTTCTAGCTGGCAGTTATTGCATCAAC GCCGAACGCCACAGATGCCAATGGACAGACTGCGGCCAAGACAACAGTGAATCCTCTCGATTCGACCGCCTTTAT GCGACGACAAAAGGCTTGTTCTGGAAACGGATTTGCCGAGGCGGGGAAGGCACCTACCTTGGTGATAGTTGCTGC AGTCACTACGGTGGTCGTTGCGCTTTGTTTTGGCAGCACAAGAATCTCTGGTGCGAGCCCGAGGATGCAAAGTCT GTTCCTGACTACGATGGGCCGCGGGCACGGGCAAATTGGCCTGTCAGCGAAGGGGGTGTTGAGGACGATAAGTGC AAAGCAGCCGGTGGTAAGGTTCAGACCACTGCTGCAAGGTCCCTTTTGGGCGACTTTTCTTATTCGACGTGCGAA TGTCACGGACAAATGTTTTTCGAAGGACGCTGCGTCTCCATGAATTAG |