Protein ID | Hirsu2|8095 |
Gene name | |
Location | Contig_508:1134..3292 |
Strand | - |
Gene length (bp) | 2158 |
Transcript length (bp) | 1566 |
Coding sequence length (bp) | 1566 |
Protein length (aa) | 522 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 44 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 74 | 96 | 22 |
2 | 134 | 156 | 22 |
3 | 169 | 191 | 22 |
4 | 206 | 228 | 22 |
5 | 266 | 288 | 22 |
6 | 308 | 330 | 22 |
7 | 472 | 494 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|8095 MATDEQTPLLPARKGRLASVVGVENRILLAGFLITLAFSYTQCDEFYASHPPPRLDGGDRCSRDEVAAGTARQYS FLSMSTTLCGTLNLFVAGSMVKRLGPRAALMAQTFVPAVRVATQILGVVAGRRTGMAIIQATQLITILGGPAGYI LVVNIFAGEVVEPLRRTAVFGKLQGSIMLGQGIGYLIGGIIGDAIDVRAPFDVAFVSFVLAGVYARCALPYIAPE AAAGLKDERCRRRHRQGLSGFLAPQRILAPQRLRLADGRRAAHYGVVFLCCGIFVGVLAGVYARFLLHLYATAAF DFNQAANGWLMWGFAVMRSLFLILVFPRVIARGRAWVSASAPAPARRRPGADAPGYFDAAVGDAEPVPDPAVREG YLFDLVFLRWSLVVDGALTAGAAFATRPWHIYLAAFFLPFGSGSAPAAKGVITEMCSESQRADALNAVTLVENVA RLATQGLFGFVFASLATVGKAYATFFCNAAIAVFGMAVLLLSSFPPAGSSLIDGGTGREDEQAVEEEPARG* |
Coding | >Hirsu2|8095 ATGGCGACGGACGAGCAGACGCCTCTCCTCCCCGCGCGCAAGGGCCGGCTCGCGTCCGTCGTCGGGGTCGAGAAC CGGATCCTGCTGGCCGGCTTCCTCATCACGCTCGCCTTCAGCTACACGCAGTGCGACGAGTTCTACGCCTCGCAC CCGCCGCCCAGGCTTGACGGCGGCGACCGCTGCAGCCGCGACGAGGTCGCGGCCGGGACGGCGAGGCAGTACAGC TTCCTGAGCATGAGCACGACGCTCTGCGGCACGCTGAACCTGTTCGTGGCCGGCTCCATGGTCAAGCGGCTCGGC CCGCGCGCGGCCCTCATGGCCCAGACGTTCGTGCCGGCCGTCCGGGTCGCGACGCAGATCCTTGGCGTCGTGGCC GGGAGGCGGACCGGCATGGCCATCATCCAGGCCACGCAGCTCATCACCATCCTGGGCGGGCCGGCCGGCTATATT CTGGTCGTCAACATCTTCGCGGGCGAGGTGGTCGAGCCACTGCGCCGGACCGCCGTCTTCGGAAAGCTGCAGGGC AGCATCATGCTGGGGCAGGGCATCGGATACCTGATCGGCGGCATCATCGGCGACGCCATCGACGTCCGCGCCCCC TTCGACGTCGCCTTCGTCTCCTTCGTCCTCGCCGGCGTCTACGCCCGGTGCGCGCTGCCGTACATCGCGCCCGAG GCCGCGGCCGGCCTCAAGGACGAGCGGTGCCGGCGCCGGCACCGGCAGGGCCTGTCGGGCTTCTTGGCGCCGCAG CGGATCCTCGCGCCGCAGCGGCTGCGGCTCGCGGACGGCCGCCGAGCTGCCCACTACGGCGTCGTCTTCCTGTGC TGCGGCATCTTCGTCGGCGTGCTCGCGGGCGTCTATGCCCGGTTCCTGCTCCATCTGTACGCGACGGCCGCGTTC GACTTCAACCAGGCGGCCAACGGCTGGCTCATGTGGGGGTTCGCCGTCATGCGCAGCCTGTTCCTCATCCTCGTC TTCCCGCGCGTCATCGCCCGCGGCCGGGCGTGGGTCTCGGCCTCGGCTCCCGCCCCGGCCCGGCGCCGGCCCGGC GCCGACGCGCCGGGCTACTTCGACGCCGCCGTGGGGGACGCCGAGCCCGTTCCGGACCCGGCCGTGCGCGAGGGC TATCTCTTCGACCTCGTCTTCCTGCGCTGGAGCCTCGTCGTCGACGGTGCACTGACCGCCGGCGCCGCCTTTGCC ACCCGGCCTTGGCACATCTATCTCGCCGCCTTCTTCTTGCCCTTCGGCTCCGGCTCCGCCCCGGCGGCCAAGGGC GTCATCACCGAGATGTGCAGCGAGTCTCAGCGGGCCGACGCCCTCAACGCCGTCACCCTGGTCGAGAACGTGGCT CGTCTGGCGACCCAGGGCCTGTTCGGCTTCGTCTTCGCCAGCCTGGCCACGGTTGGAAAGGCCTACGCCACCTTC TTCTGCAACGCCGCCATCGCCGTCTTCGGCATGGCTGTGCTGTTGTTGTCCAGCTTCCCGCCGGCCGGCAGCAGC TTGATCGATGGGGGAACCGGCCGTGAGGACGAGCAGGCGGTTGAGGAAGAGCCCGCGAGGGGTTAG |
Transcript | >Hirsu2|8095 ATGGCGACGGACGAGCAGACGCCTCTCCTCCCCGCGCGCAAGGGCCGGCTCGCGTCCGTCGTCGGGGTCGAGAAC CGGATCCTGCTGGCCGGCTTCCTCATCACGCTCGCCTTCAGCTACACGCAGTGCGACGAGTTCTACGCCTCGCAC CCGCCGCCCAGGCTTGACGGCGGCGACCGCTGCAGCCGCGACGAGGTCGCGGCCGGGACGGCGAGGCAGTACAGC TTCCTGAGCATGAGCACGACGCTCTGCGGCACGCTGAACCTGTTCGTGGCCGGCTCCATGGTCAAGCGGCTCGGC CCGCGCGCGGCCCTCATGGCCCAGACGTTCGTGCCGGCCGTCCGGGTCGCGACGCAGATCCTTGGCGTCGTGGCC GGGAGGCGGACCGGCATGGCCATCATCCAGGCCACGCAGCTCATCACCATCCTGGGCGGGCCGGCCGGCTATATT CTGGTCGTCAACATCTTCGCGGGCGAGGTGGTCGAGCCACTGCGCCGGACCGCCGTCTTCGGAAAGCTGCAGGGC AGCATCATGCTGGGGCAGGGCATCGGATACCTGATCGGCGGCATCATCGGCGACGCCATCGACGTCCGCGCCCCC TTCGACGTCGCCTTCGTCTCCTTCGTCCTCGCCGGCGTCTACGCCCGGTGCGCGCTGCCGTACATCGCGCCCGAG GCCGCGGCCGGCCTCAAGGACGAGCGGTGCCGGCGCCGGCACCGGCAGGGCCTGTCGGGCTTCTTGGCGCCGCAG CGGATCCTCGCGCCGCAGCGGCTGCGGCTCGCGGACGGCCGCCGAGCTGCCCACTACGGCGTCGTCTTCCTGTGC TGCGGCATCTTCGTCGGCGTGCTCGCGGGCGTCTATGCCCGGTTCCTGCTCCATCTGTACGCGACGGCCGCGTTC GACTTCAACCAGGCGGCCAACGGCTGGCTCATGTGGGGGTTCGCCGTCATGCGCAGCCTGTTCCTCATCCTCGTC TTCCCGCGCGTCATCGCCCGCGGCCGGGCGTGGGTCTCGGCCTCGGCTCCCGCCCCGGCCCGGCGCCGGCCCGGC GCCGACGCGCCGGGCTACTTCGACGCCGCCGTGGGGGACGCCGAGCCCGTTCCGGACCCGGCCGTGCGCGAGGGC TATCTCTTCGACCTCGTCTTCCTGCGCTGGAGCCTCGTCGTCGACGGTGCACTGACCGCCGGCGCCGCCTTTGCC ACCCGGCCTTGGCACATCTATCTCGCCGCCTTCTTCTTGCCCTTCGGCTCCGGCTCCGCCCCGGCGGCCAAGGGC GTCATCACCGAGATGTGCAGCGAGTCTCAGCGGGCCGACGCCCTCAACGCCGTCACCCTGGTCGAGAACGTGGCT CGTCTGGCGACCCAGGGCCTGTTCGGCTTCGTCTTCGCCAGCCTGGCCACGGTTGGAAAGGCCTACGCCACCTTC TTCTGCAACGCCGCCATCGCCGTCTTCGGCATGGCTGTGCTGTTGTTGTCCAGCTTCCCGCCGGCCGGCAGCAGC TTGATCGATGGGGGAACCGGCCGTGAGGACGAGCAGGCGGTTGAGGAAGAGCCCGCGAGGGGTTAG |
Gene | >Hirsu2|8095 ATGGCGACGGACGAGCAGACGCCTCTCCTCCCCGCGCGCAAGGGCCGGCTCGCGTCCGTCGTCGGGGTCGAGAAC CGGATCCTGCTGGCCGGCTTCCTCATCACGCTCGCCTTCAGCTACACGCAGGTTCCGTAGGTCTCTCTCTGTCGT CTCTCGCGCCGGGGAAGCGGACGGCTGACGGCCCAATTGGACTGCTGTACGTCTTCCGCCTGATGGAGTGCGACG AGTTCTACGCCTCGCACCCGCCGCCCAGGCTTGACGGCGGCGACCGCTGCAGCCGCGACGAGGTCGCGGCCGGGA CGGCGAGGCAGTACAGCTTCCTGAGCATGAGCACGACGCTCTGCGGTGCGTCGCGATCCCCTTGGCTCTCATGAC GGCAAAAGATGGGCCGAGTGGCTCGCTGACGGTGTCGGCGCAGGCACGCTGAACCTGTTCGTGGCCGGCTCCATG GTCAAGCGGCTCGGCCCGCGCGCGGCCCTCATGGCCCAGACGTTCGTGCCGGCCGTCCGGGTCGCGACGCAGATC CTTGGCGTCGTGGCCGGGAGGCGGACCGGCATGGCCATCATCCAGGCCACGCAGCTCATCACCATCCTGGGCGGG CCGGCCGGCTATATGTGAGTGCTGCGGTCCGGAGGGAGGGGCCGAGAGCAGGCTGACGGTCCGGACCCGACTGCT TTTGTTTGTCTTTCTCGGCCCTCGACAGTCTGGTCGTCAACATCTTCGCGGGCGAGGTGGTCGAGCCACTGCGCC GGACCGCCGTCTTCGGAAAGCTGCAGGGCAGCATCATGCTGGGGCAGGGCATCGGATACCTGAGTAGGTCGCGGG AGCCGAGGCCGGGGAGAGAGGAGGTTCTCGGCTGACGGGCGCTCATCGCAGTCGGCGGCATCATCGGCGACGCCA TCGACGTCCGCGCCCCCTTCGACGTCGCCTTCGTCTCCTTCGTCCTCGCCGGCGTCTACGCCCGGTGCGCGCTGC CGTACATCGCGCCCGAGGCCGCGGCCGGCCTCAAGGACGAGCGGTGCCGGCGCCGGCACCGGCAGGGCCTGTCGG GCTTCTTGGCGCCGCAGCGGATCCTCGCGCCGCAGCGGCTGCGGCTCGCGGACGGCCGCCGAGCTGCCCACTACG GCGTCGTCTTCCTGTGCTGCGGCATCTTCGTCGGCGTGGTGCGTTCCCCGTGTCTGCTTCCGGGAGAGAGACATC ATCGTCTTCTCTCTGACCCGGCCCCCTTTCTTTCCGCCTGTCGGCTGTTGTTGGCTGACAACGGCATCGGCCACG TTCACAGCTCGCGGGCGTCTATGCCCGGTTCCTGCTCCATCTGTACGCGACGGCCGCGTTCGACTTCAACCAGGC GGCCAACGGCTGGCTCATGTGGGGGTTCGCCGTCATGCGCAGCCTGTTCCTCATCCTCGTCTTCCCGCGCGTCAT CGCCCGCGGCCGGGCGTGGGTCTCGGCCTCGGCTCCCGCCCCGGCCCGGCGCCGGCCCGGCGCCGACGCGCCGGG CTACTTCGACGCCGCCGTGGGGGACGCCGAGCCCGTTCCGGACCCGGCCGTGCGCGAGGGCTATCTCTTCGACCT CGTCTTCCTGCGCTGGAGCCTCGTCGTCGACGGTGCACTGACCGCCGGCGCCGCCTTTGCCACCCGGCCTTGGCA CATCTATCTCGGTAAGCCCTTTCGCAGACCGGCATTTCTTTGGGACGGCGTTCGTGCCTCAGCGTCGCTTACTCG CTTCCCCCTTGCTGGCCCTCAGCCGCCTTCTTCTTGCCCTTCGGCTCCGGCTCCGCCCCGGCGGCCAAGGGCGTC ATCACCGAGATGTGCAGCGAGTCTCAGCGGGCCGACGCCCTCAACGCCGTCACCCTGGTCGAGAACGTGGCTCGT CTGGCGACCCAGGGCCTGTTCGGCTTCGTCTTCGCCAGCCTGGCCACGGTTGGAAAGGCCTACGCCACCTTCTTC TGCAACGCCGTGAGTTGTCACCTCCCCGTCGTGCCTGTTCTCGGCGGCTGGGGTGTGCTGACGCCCGGTATGTGT ACAGGCCATCGCCGTCTTCGGCATGGCTGTGCTGTTGTTGTCCAGCTTCCCGCCGGCCGGCAGCAGCTTGATCGA TGGGGGAACCGGCCGTGAGGACGAGCAGGCGGTTGAGGAAGAGCCCGCGAGGGGTTAG |