Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8094
Gene name
LocationContig_508:197..534
Strand+
Gene length (bp)337
Transcript length (bp)255
Coding sequence length (bp)255
Protein length (aa) 85

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.0716 0.0463 0.9106 0.1193 0.143 0.0039 0.0369 0.1356 0.0584 0.0131

SignalP

SignalP signal predicted Location Score
Yes 1 - 16 0.999737

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup315
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-floridani Ophcf2|03012
Ophiocordyceps camponoti-rufipedis Ophun1|1236
Ophiocordyceps kimflemingae Ophio5|4696
Ophiocordyceps kimflemingae Ophio5|500
Ophiocordyceps subramaniannii Hirsu2|1762
Ophiocordyceps subramaniannii Hirsu2|3584
Ophiocordyceps subramaniannii Hirsu2|8094 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8094
MKFFAAVLALAATAFAAPTELEPRGQVKSCNAVTGGSQVCCNSLLLNCVVQVISHTCTTEAYCCETGASTGGLIN
INALNCVKL*
Coding >Hirsu2|8094
ATGAAGTTCTTCGCCGCTGTCCTGGCCCTTGCCGCCACTGCCTTCGCCGCTCCCACCGAGCTCGAGCCCCGCGGC
CAGGTCAAGAGCTGCAACGCCGTGACCGGTGGATCCCAGGTCTGCTGCAACAGTCTCCTCCTCAACTGCGTCGTC
CAGGTCATCAGCCACACCTGCACCACCGAGGCCTACTGCTGCGAGACCGGTGCCTCCACTGGCGGCCTGATCAAC
ATCAACGCACTGAACTGCGTCAAGCTCTAA
Transcript >Hirsu2|8094
ATGAAGTTCTTCGCCGCTGTCCTGGCCCTTGCCGCCACTGCCTTCGCCGCTCCCACCGAGCTCGAGCCCCGCGGC
CAGGTCAAGAGCTGCAACGCCGTGACCGGTGGATCCCAGGTCTGCTGCAACAGTCTCCTCCTCAACTGCGTCGTC
CAGGTCATCAGCCACACCTGCACCACCGAGGCCTACTGCTGCGAGACCGGTGCCTCCACTGGCGGCCTGATCAAC
ATCAACGCACTGAACTGCGTCAAGCTCTAA
Gene >Hirsu2|8094
ATGAAGTTCTTCGCCGCTGTCCTGGCCCTTGCCGCCACTGCCTTCGCCGCTCCCACCGAGCTCGAGCCCCGCGGC
CAGGTCAAGAGCTGCAACGCCGTGACCGGTGGATCCCAGGTCTGCTGCAACAGTCTCCTCCTCAACTGCGTCGTC
CAGGTCATCAGCCACACCTGCACCACCGAGGCCTACTGCTGCGAGACCGGTGCCTCCACTGTAAGTTTTGTCTAA
ACAGAGAGAAAGACTGTCGATGTCTTCATCACCATGGTTCGCAGATGGACTGACTCTTGCTCTTTAGGGCGGCCT
GATCAACATCAACGCACTGAACTGCGTCAAGCTCTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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