Protein ID | Hirsu2|8094 |
Gene name | |
Location | Contig_508:197..534 |
Strand | + |
Gene length (bp) | 337 |
Transcript length (bp) | 255 |
Coding sequence length (bp) | 255 |
Protein length (aa) | 85 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.0716 | 0.0463 | 0.9106 | 0.1193 | 0.143 | 0.0039 | 0.0369 | 0.1356 | 0.0584 | 0.0131 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 16 | 0.999737 |
Orthofinder run ID | 4 |
Orthogroup | 315 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|8094 MKFFAAVLALAATAFAAPTELEPRGQVKSCNAVTGGSQVCCNSLLLNCVVQVISHTCTTEAYCCETGASTGGLIN INALNCVKL* |
Coding | >Hirsu2|8094 ATGAAGTTCTTCGCCGCTGTCCTGGCCCTTGCCGCCACTGCCTTCGCCGCTCCCACCGAGCTCGAGCCCCGCGGC CAGGTCAAGAGCTGCAACGCCGTGACCGGTGGATCCCAGGTCTGCTGCAACAGTCTCCTCCTCAACTGCGTCGTC CAGGTCATCAGCCACACCTGCACCACCGAGGCCTACTGCTGCGAGACCGGTGCCTCCACTGGCGGCCTGATCAAC ATCAACGCACTGAACTGCGTCAAGCTCTAA |
Transcript | >Hirsu2|8094 ATGAAGTTCTTCGCCGCTGTCCTGGCCCTTGCCGCCACTGCCTTCGCCGCTCCCACCGAGCTCGAGCCCCGCGGC CAGGTCAAGAGCTGCAACGCCGTGACCGGTGGATCCCAGGTCTGCTGCAACAGTCTCCTCCTCAACTGCGTCGTC CAGGTCATCAGCCACACCTGCACCACCGAGGCCTACTGCTGCGAGACCGGTGCCTCCACTGGCGGCCTGATCAAC ATCAACGCACTGAACTGCGTCAAGCTCTAA |
Gene | >Hirsu2|8094 ATGAAGTTCTTCGCCGCTGTCCTGGCCCTTGCCGCCACTGCCTTCGCCGCTCCCACCGAGCTCGAGCCCCGCGGC CAGGTCAAGAGCTGCAACGCCGTGACCGGTGGATCCCAGGTCTGCTGCAACAGTCTCCTCCTCAACTGCGTCGTC CAGGTCATCAGCCACACCTGCACCACCGAGGCCTACTGCTGCGAGACCGGTGCCTCCACTGTAAGTTTTGTCTAA ACAGAGAGAAAGACTGTCGATGTCTTCATCACCATGGTTCGCAGATGGACTGACTCTTGCTCTTTAGGGCGGCCT GATCAACATCAACGCACTGAACTGCGTCAAGCTCTAA |