Protein ID | Hirsu2|8077 |
Gene name | |
Location | Contig_505:9383..12230 |
Strand | + |
Gene length (bp) | 2847 |
Transcript length (bp) | 2787 |
Coding sequence length (bp) | 2787 |
Protein length (aa) | 929 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF11915 | DUF3433 | Protein of unknown function (DUF3433) | 2.2E-13 | 367 | 453 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cell membrane|Lysosome/Vacuole | Signal peptide|Transmembrane domain | 0.1004 | 0.09 | 0.1066 | 0.5991 | 0.0642 | 0.0142 | 0.2874 | 0.5825 | 0.4558 | 0.0043 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 325 | 344 | 19 |
2 | 364 | 384 | 20 |
3 | 430 | 452 | 22 |
4 | 812 | 834 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 39 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|8077 MVTHTSRIGTGLERPKRDKVTCPDLSRFNDKYIAIWAKAENQSPKALLCQPFFYKQSVTANIGVEDARPLDGSLL PLSGKQPLSSSEFNRRSFIHAALLWPLQNDGARRYLDLPDDLLKSRYNLTGLPKSSKLELNHMVALALSTTGGTV SLDAFSDPRALETVFTRAYQQLFSLCVSHFLANGTIVTGDQAVYTYPMNAIVVSRLFSALLESLPLLMAGSSATI LYLCHNVQSNLRSNPNSMSRLIEKCPANSIQKLGMLSRLDHVHRKMLFKCLQNETFRLSSVDKLIQDDVEARLQN ADQDVNQSEPFFKPAYPFALTRNAGFSFLGILLGAITFLTWLHIKEITCNGIPRPSENFETRQILEHFIPSIFAT LIGILWVWLNRLLCCILPFHELGKGKARPAWSIDITYTAMLPQLNAWRAFKARHFVLSIVCLTALLSNPLGIGMA ALFHEETITVPGPQEFRPLLVPELTNGSDMYQKISTKCHSMDEFFIAESTMSHKTRLQPWVTPAYFFLPHEVIGH EFHHADDTYIVQTQGLGADLNCTPNVAYSEPLQDSDLDEALHWPAHHEIENHCLHGISDVTHQALLSLRYLYREA APSEHDMSTSQNWMYLLANHKDSQLNSDCESAFFVAWARLSGPKPRESKTFNMSLAFCIPVFEAASFNVSVDMNG NILSYSKTGEMGSPSGFTYNKTVVNDMLAVITHRFSTRDLSALGVSWPSHGEATNYLTYLSTLPPKYSNSSLDPN QPIPDAARMISDIKDVYRRVFAIVLGLSHDGLFNRANSTELTKGTRLVKETRIFMDPFAQKLTLVLLSINVLVAL ILYIRGFVCVLPRLPNSIGSVLAYIAPSNMVATGSLPLERGQTVSFGRYVGADGVAHVGIDVDPFVVPIDPSSLK ETGLFHRLTSLWIPGKTRQTKARFRPWL* |
Coding | >Hirsu2|8077 ATGGTAACACATACCTCGCGTATCGGAACTGGCCTGGAAAGACCAAAGAGAGACAAGGTGACCTGCCCAGATCTT TCACGATTTAACGACAAGTACATCGCAATATGGGCGAAGGCTGAGAACCAAAGTCCCAAGGCTTTGCTTTGCCAA CCTTTCTTCTACAAACAGAGTGTCACAGCGAATATCGGCGTCGAAGACGCCAGACCCCTTGACGGCTCACTTTTA CCACTCTCAGGGAAACAACCGCTAAGCAGTTCTGAATTCAACCGACGTTCTTTCATACACGCGGCCTTGTTGTGG CCCCTACAAAATGATGGAGCTCGTCGATATTTGGACCTACCCGACGATCTATTAAAGTCTCGATATAACCTAACC GGACTTCCCAAATCGTCCAAGCTCGAATTAAACCACATGGTTGCACTCGCCCTTTCCACGACTGGGGGAACGGTA TCCCTTGATGCCTTTTCTGATCCACGAGCCCTCGAAACTGTTTTTACTCGCGCGTACCAGCAACTTTTCTCTCTC TGCGTCAGTCACTTTCTCGCAAACGGGACGATAGTTACCGGTGATCAGGCTGTGTACACATACCCAATGAATGCG ATTGTCGTCAGCAGGTTATTTTCAGCACTTCTCGAATCTCTACCACTTCTTATGGCGGGAAGCTCGGCAACGATC CTCTATCTCTGTCACAACGTTCAATCAAATCTTCGGTCGAATCCTAATTCCATGTCTAGGCTTATCGAAAAGTGT CCAGCCAATAGTATACAGAAACTTGGCATGCTAAGTAGGCTTGATCACGTACACCGAAAGATGCTGTTCAAGTGC CTCCAAAACGAAACCTTTCGCCTCTCAAGTGTTGATAAACTTATTCAAGACGATGTCGAGGCTCGTCTACAGAAT GCGGACCAGGACGTAAATCAGTCAGAACCTTTCTTTAAGCCGGCCTACCCTTTCGCTCTCACTCGAAATGCAGGC TTCTCGTTCCTCGGCATTCTTCTGGGAGCGATTACATTCCTCACTTGGCTGCATATCAAAGAGATTACTTGCAAT GGGATACCTCGACCGAGCGAAAATTTCGAAACACGCCAAATTCTAGAACATTTCATTCCGTCAATCTTCGCAACT CTGATCGGAATTCTATGGGTTTGGCTCAACCGGCTACTGTGCTGTATCCTACCATTTCACGAGCTTGGTAAAGGC AAGGCTCGACCGGCTTGGAGCATCGATATCACATATACGGCCATGTTGCCGCAACTCAACGCGTGGAGGGCCTTC AAAGCTCGTCACTTCGTACTCAGTATTGTATGCCTCACTGCATTATTATCTAATCCTCTAGGCATCGGAATGGCT GCTCTATTTCACGAAGAGACAATCACTGTCCCCGGGCCCCAAGAGTTCCGGCCATTGCTCGTGCCTGAGTTGACG AATGGCTCAGACATGTACCAGAAGATATCAACTAAGTGTCACAGCATGGACGAGTTCTTCATCGCCGAATCCACC ATGTCCCACAAAACCCGTCTGCAACCCTGGGTTACTCCGGCTTACTTCTTCCTGCCACATGAAGTGATAGGCCAC GAGTTCCACCATGCGGACGATACATATATTGTGCAAACCCAAGGCCTCGGCGCCGACTTGAACTGCACACCCAAC GTCGCTTACTCTGAACCACTTCAAGATTCGGATCTGGACGAGGCGCTTCATTGGCCCGCACACCATGAGATAGAA AATCATTGCCTTCACGGAATATCCGACGTCACTCATCAGGCTCTCCTATCTCTGCGCTACTTATATCGCGAGGCG GCGCCTTCAGAACACGATATGTCTACAAGCCAAAATTGGATGTATTTGCTCGCCAACCACAAGGACAGTCAATTA AACTCCGACTGCGAAAGTGCTTTTTTTGTGGCTTGGGCCAGATTATCTGGACCCAAGCCGCGTGAGAGTAAAACT TTCAACATGAGTCTGGCTTTCTGCATACCCGTTTTTGAGGCAGCCTCATTCAATGTTTCCGTTGACATGAACGGA AACATTCTTTCCTATAGCAAAACAGGGGAGATGGGATCCCCTTCGGGCTTTACATACAACAAAACTGTGGTTAAT GATATGTTGGCCGTCATTACTCACCGCTTCTCAACCCGCGATCTTTCTGCCTTAGGAGTCAGCTGGCCAAGCCAT GGCGAGGCAACCAATTATCTCACTTATCTATCAACCCTTCCACCGAAGTATTCCAACTCCTCTCTCGACCCGAAT CAGCCAATCCCTGATGCGGCAAGGATGATTTCTGATATCAAGGACGTCTACCGTCGAGTGTTTGCCATTGTGCTC GGTCTCAGCCACGACGGCTTGTTTAACAGAGCCAACTCAACCGAACTCACCAAAGGAACCAGGCTGGTCAAAGAG ACACGGATATTTATGGACCCTTTCGCCCAAAAGCTGACACTCGTCCTGTTGTCAATCAACGTTCTCGTTGCGCTG ATTCTGTACATACGTGGCTTCGTTTGCGTCCTCCCGCGCTTGCCGAACAGCATAGGCTCGGTCCTGGCTTACATC GCCCCCAGCAACATGGTCGCCACTGGGTCCCTGCCGCTCGAGAGAGGCCAGACGGTTAGCTTTGGGCGGTATGTG GGAGCTGATGGTGTGGCACACGTCGGCATCGATGTCGACCCTTTCGTCGTGCCTATCGACCCATCGTCCTTGAAA GAGACGGGTCTCTTCCATCGCCTTACTAGTCTATGGATTCCAGGCAAGACTCGACAGACGAAAGCGCGGTTTCGT CCTTGGCTGTGA |
Transcript | >Hirsu2|8077 ATGGTAACACATACCTCGCGTATCGGAACTGGCCTGGAAAGACCAAAGAGAGACAAGGTGACCTGCCCAGATCTT TCACGATTTAACGACAAGTACATCGCAATATGGGCGAAGGCTGAGAACCAAAGTCCCAAGGCTTTGCTTTGCCAA CCTTTCTTCTACAAACAGAGTGTCACAGCGAATATCGGCGTCGAAGACGCCAGACCCCTTGACGGCTCACTTTTA CCACTCTCAGGGAAACAACCGCTAAGCAGTTCTGAATTCAACCGACGTTCTTTCATACACGCGGCCTTGTTGTGG CCCCTACAAAATGATGGAGCTCGTCGATATTTGGACCTACCCGACGATCTATTAAAGTCTCGATATAACCTAACC GGACTTCCCAAATCGTCCAAGCTCGAATTAAACCACATGGTTGCACTCGCCCTTTCCACGACTGGGGGAACGGTA TCCCTTGATGCCTTTTCTGATCCACGAGCCCTCGAAACTGTTTTTACTCGCGCGTACCAGCAACTTTTCTCTCTC TGCGTCAGTCACTTTCTCGCAAACGGGACGATAGTTACCGGTGATCAGGCTGTGTACACATACCCAATGAATGCG ATTGTCGTCAGCAGGTTATTTTCAGCACTTCTCGAATCTCTACCACTTCTTATGGCGGGAAGCTCGGCAACGATC CTCTATCTCTGTCACAACGTTCAATCAAATCTTCGGTCGAATCCTAATTCCATGTCTAGGCTTATCGAAAAGTGT CCAGCCAATAGTATACAGAAACTTGGCATGCTAAGTAGGCTTGATCACGTACACCGAAAGATGCTGTTCAAGTGC CTCCAAAACGAAACCTTTCGCCTCTCAAGTGTTGATAAACTTATTCAAGACGATGTCGAGGCTCGTCTACAGAAT GCGGACCAGGACGTAAATCAGTCAGAACCTTTCTTTAAGCCGGCCTACCCTTTCGCTCTCACTCGAAATGCAGGC TTCTCGTTCCTCGGCATTCTTCTGGGAGCGATTACATTCCTCACTTGGCTGCATATCAAAGAGATTACTTGCAAT GGGATACCTCGACCGAGCGAAAATTTCGAAACACGCCAAATTCTAGAACATTTCATTCCGTCAATCTTCGCAACT CTGATCGGAATTCTATGGGTTTGGCTCAACCGGCTACTGTGCTGTATCCTACCATTTCACGAGCTTGGTAAAGGC AAGGCTCGACCGGCTTGGAGCATCGATATCACATATACGGCCATGTTGCCGCAACTCAACGCGTGGAGGGCCTTC AAAGCTCGTCACTTCGTACTCAGTATTGTATGCCTCACTGCATTATTATCTAATCCTCTAGGCATCGGAATGGCT GCTCTATTTCACGAAGAGACAATCACTGTCCCCGGGCCCCAAGAGTTCCGGCCATTGCTCGTGCCTGAGTTGACG AATGGCTCAGACATGTACCAGAAGATATCAACTAAGTGTCACAGCATGGACGAGTTCTTCATCGCCGAATCCACC ATGTCCCACAAAACCCGTCTGCAACCCTGGGTTACTCCGGCTTACTTCTTCCTGCCACATGAAGTGATAGGCCAC GAGTTCCACCATGCGGACGATACATATATTGTGCAAACCCAAGGCCTCGGCGCCGACTTGAACTGCACACCCAAC GTCGCTTACTCTGAACCACTTCAAGATTCGGATCTGGACGAGGCGCTTCATTGGCCCGCACACCATGAGATAGAA AATCATTGCCTTCACGGAATATCCGACGTCACTCATCAGGCTCTCCTATCTCTGCGCTACTTATATCGCGAGGCG GCGCCTTCAGAACACGATATGTCTACAAGCCAAAATTGGATGTATTTGCTCGCCAACCACAAGGACAGTCAATTA AACTCCGACTGCGAAAGTGCTTTTTTTGTGGCTTGGGCCAGATTATCTGGACCCAAGCCGCGTGAGAGTAAAACT TTCAACATGAGTCTGGCTTTCTGCATACCCGTTTTTGAGGCAGCCTCATTCAATGTTTCCGTTGACATGAACGGA AACATTCTTTCCTATAGCAAAACAGGGGAGATGGGATCCCCTTCGGGCTTTACATACAACAAAACTGTGGTTAAT GATATGTTGGCCGTCATTACTCACCGCTTCTCAACCCGCGATCTTTCTGCCTTAGGAGTCAGCTGGCCAAGCCAT GGCGAGGCAACCAATTATCTCACTTATCTATCAACCCTTCCACCGAAGTATTCCAACTCCTCTCTCGACCCGAAT CAGCCAATCCCTGATGCGGCAAGGATGATTTCTGATATCAAGGACGTCTACCGTCGAGTGTTTGCCATTGTGCTC GGTCTCAGCCACGACGGCTTGTTTAACAGAGCCAACTCAACCGAACTCACCAAAGGAACCAGGCTGGTCAAAGAG ACACGGATATTTATGGACCCTTTCGCCCAAAAGCTGACACTCGTCCTGTTGTCAATCAACGTTCTCGTTGCGCTG ATTCTGTACATACGTGGCTTCGTTTGCGTCCTCCCGCGCTTGCCGAACAGCATAGGCTCGGTCCTGGCTTACATC GCCCCCAGCAACATGGTCGCCACTGGGTCCCTGCCGCTCGAGAGAGGCCAGACGGTTAGCTTTGGGCGGTATGTG GGAGCTGATGGTGTGGCACACGTCGGCATCGATGTCGACCCTTTCGTCGTGCCTATCGACCCATCGTCCTTGAAA GAGACGGGTCTCTTCCATCGCCTTACTAGTCTATGGATTCCAGGCAAGACTCGACAGACGAAAGCGCGGTTTCGT CCTTGGCTGTGA |
Gene | >Hirsu2|8077 ATGGTAACACATACCTCGCGTATCGGAACTGGCCTGGAAAGACCAAAGAGAGACAAGGTGACCTGCCCAGATCTT TCACGATTTAACGACAAGTACATCGCAATATGGGCGAAGGCTGAGAACCAAAGTCCCAAGGCTTTGCTTTGCCAA CCTTTCTTCTACAAACAGAGTGTCACAGCGAATATCGGCGTCGAAGACGCCAGACCCCTTGACGGCTCACTTTTA CCACTCTCAGGGAAACAACCGCTAAGCAGTTCTGAATTCAACCGACGTTCTTTCATACACGCGGCCTTGTTGTGG CCCCTACAAAATGATGGAGCTCGTCGATATTTGGACCTACCCGACGATCTATTAAAGTCTCGATATAACCTAACC GGACTTCCCAAATCGTCCAAGCTCGAATTAAACCACATGGTTGCACTCGCCCTTTCCACGACTGGGGGAACGGTA TCCCTTGATGCCTTTTCTGATCCACGAGCCCTCGAAACTGTTTTTACTCGCGCGTACCAGCAACTTTTCTCTCTC TGCGTCAGTCACTTTCTCGCAAACGGGACGATAGTTACCGGTGATCAGGCTGTGTACACATACCCAATGAATGCG ATTGTCGTCAGCAGGTTATTTTCAGCACTTCTCGAATCTCTACCACTTCTTATGGCGGGAAGCTCGGCAACGATC CTCTATCTCTGTCACAACGTTCAATCAAATCTTCGGTCGAATCCTAATTCCATGTCTAGGCTTATCGAAAAGTGT CCAGCCAATAGTATACAGAAACTTGGCATGCTAAGTAGGCTTGATCACGTACACCGAAAGATGCTGTTCAAGTGC CTCCAAAACGAAACCTTTCGCCTCTCAAGTGTTGATAAACTTATTCAAGACGATGTCGAGGCTCGTCTACAGAAT GCGGACCAGGACGTAAATCAGTCAGAACCTTTCTTTAAGCCGGCCTACCCTTTCGCTCTCACTCGAAATGCAGGC TTCTCGTTCCTCGGCATTCTTCTGGGAGCGATTACATTCCTCACTTGGCTGCATATCAAAGAGATTACTTGCAAT GGTACGGAAGTTCCTTCCACCTAGCCACAAGCAATACTAAGTCATGACACGTAATGATCAGGGATACCTCGACCG AGCGAAAATTTCGAAACACGCCAAATTCTAGAACATTTCATTCCGTCAATCTTCGCAACTCTGATCGGAATTCTA TGGGTTTGGCTCAACCGGCTACTGTGCTGTATCCTACCATTTCACGAGCTTGGTAAAGGCAAGGCTCGACCGGCT TGGAGCATCGATATCACATATACGGCCATGTTGCCGCAACTCAACGCGTGGAGGGCCTTCAAAGCTCGTCACTTC GTACTCAGTATTGTATGCCTCACTGCATTATTATCTAATCCTCTAGGCATCGGAATGGCTGCTCTATTTCACGAA GAGACAATCACTGTCCCCGGGCCCCAAGAGTTCCGGCCATTGCTCGTGCCTGAGTTGACGAATGGCTCAGACATG TACCAGAAGATATCAACTAAGTGTCACAGCATGGACGAGTTCTTCATCGCCGAATCCACCATGTCCCACAAAACC CGTCTGCAACCCTGGGTTACTCCGGCTTACTTCTTCCTGCCACATGAAGTGATAGGCCACGAGTTCCACCATGCG GACGATACATATATTGTGCAAACCCAAGGCCTCGGCGCCGACTTGAACTGCACACCCAACGTCGCTTACTCTGAA CCACTTCAAGATTCGGATCTGGACGAGGCGCTTCATTGGCCCGCACACCATGAGATAGAAAATCATTGCCTTCAC GGAATATCCGACGTCACTCATCAGGCTCTCCTATCTCTGCGCTACTTATATCGCGAGGCGGCGCCTTCAGAACAC GATATGTCTACAAGCCAAAATTGGATGTATTTGCTCGCCAACCACAAGGACAGTCAATTAAACTCCGACTGCGAA AGTGCTTTTTTTGTGGCTTGGGCCAGATTATCTGGACCCAAGCCGCGTGAGAGTAAAACTTTCAACATGAGTCTG GCTTTCTGCATACCCGTTTTTGAGGCAGCCTCATTCAATGTTTCCGTTGACATGAACGGAAACATTCTTTCCTAT AGCAAAACAGGGGAGATGGGATCCCCTTCGGGCTTTACATACAACAAAACTGTGGTTAATGATATGTTGGCCGTC ATTACTCACCGCTTCTCAACCCGCGATCTTTCTGCCTTAGGAGTCAGCTGGCCAAGCCATGGCGAGGCAACCAAT TATCTCACTTATCTATCAACCCTTCCACCGAAGTATTCCAACTCCTCTCTCGACCCGAATCAGCCAATCCCTGAT GCGGCAAGGATGATTTCTGATATCAAGGACGTCTACCGTCGAGTGTTTGCCATTGTGCTCGGTCTCAGCCACGAC GGCTTGTTTAACAGAGCCAACTCAACCGAACTCACCAAAGGAACCAGGCTGGTCAAAGAGACACGGATATTTATG GACCCTTTCGCCCAAAAGCTGACACTCGTCCTGTTGTCAATCAACGTTCTCGTTGCGCTGATTCTGTACATACGT GGCTTCGTTTGCGTCCTCCCGCGCTTGCCGAACAGCATAGGCTCGGTCCTGGCTTACATCGCCCCCAGCAACATG GTCGCCACTGGGTCCCTGCCGCTCGAGAGAGGCCAGACGGTTAGCTTTGGGCGGTATGTGGGAGCTGATGGTGTG GCACACGTCGGCATCGATGTCGACCCTTTCGTCGTGCCTATCGACCCATCGTCCTTGAAAGAGACGGGTCTCTTC CATCGCCTTACTAGTCTATGGATTCCAGGCAAGACTCGACAGACGAAAGCGCGGTTTCGTCCTTGGCTGTGA |