Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8070
Gene name
LocationContig_504:6116..7308
Strand+
Gene length (bp)1192
Transcript length (bp)1095
Coding sequence length (bp)1095
Protein length (aa) 365

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 25 0.5

Transmembrane Domains

Domain # Start End Length
1 27 49 22
2 140 162 22
3 252 274 22
4 334 356 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8070
MDVSLIKRAVLATSGHDPSDYKLPQWTWIVLALDLIILLPVCVIFNYTLKNVYPVFAIIEDETPPAYEPVALHEG
DDAGRPASSIIKSDSAAGAGARYGGGGDTGSLRGINRLLMAHGGVTANLRGLSCYLAQSAMTTALVAVFDSALGG
LFTPVATLLAALALVQFSAAWVHVVVTPPSPRRFWQRLPPFRRAFDATWRPVTLHWFACEAARWLPLALAGLSGL
TLPELQITGDRQASVHSPDNVFVAKTLALALATLLAALFLVVPTGVVLVRVQASLLPAGDDAVVPFDRSFAGRVE
SALVGGRGFASMADAWHTFGRPAWRRLLVLYAKIFLASVAGFVLVTALILPEAILIASNSARLD*
Coding >Hirsu2|8070
ATGGACGTCTCGCTCATCAAGAGGGCCGTTCTGGCCACCAGCGGCCACGACCCGTCCGACTACAAGCTGCCGCAG
TGGACCTGGATCGTGCTCGCTCTCGACCTCATCATCCTGCTCCCCGTCTGCGTCATTTTCAACTATACGCTCAAG
AACGTCTATCCCGTCTTCGCCATCATCGAAGACGAGACGCCCCCCGCCTACGAGCCCGTGGCCCTGCACGAAGGC
GACGACGCCGGCCGCCCAGCCAGCAGCATCATCAAGTCGGACAGCGCCGCCGGCGCCGGGGCCCGCTACGGCGGC
GGCGGCGACACGGGGTCGCTGCGCGGCATCAACCGGCTGCTCATGGCGCACGGCGGCGTGACGGCCAACCTGCGC
GGCCTGAGCTGCTACCTGGCGCAGTCGGCCATGACGACGGCGCTGGTGGCCGTCTTCGACTCGGCGCTGGGCGGC
CTGTTCACGCCGGTGGCGACGCTGCTGGCGGCGCTGGCGCTGGTGCAGTTCAGCGCGGCCTGGGTCCACGTGGTC
GTGACGCCGCCGTCGCCGCGGCGCTTCTGGCAGCGGCTGCCGCCCTTCCGGCGCGCCTTCGACGCCACCTGGCGG
CCCGTGACGCTGCACTGGTTCGCGTGCGAGGCGGCACGCTGGCTGCCGCTGGCGCTCGCCGGCCTCAGCGGCCTG
ACGCTGCCGGAGCTGCAGATCACGGGCGACCGCCAGGCCAGCGTGCACAGCCCGGACAACGTCTTCGTCGCCAAG
ACGCTGGCCCTCGCCCTCGCCACCCTGCTGGCCGCCCTCTTCCTCGTCGTGCCCACCGGCGTCGTCCTCGTCCGC
GTCCAGGCCTCGCTGCTGCCCGCCGGCGACGACGCCGTCGTCCCCTTCGACCGCTCCTTCGCCGGCCGCGTCGAG
TCGGCCCTCGTCGGCGGCCGCGGCTTCGCCTCCATGGCCGACGCCTGGCACACCTTTGGCCGCCCCGCCTGGCGC
CGCCTCCTCGTCCTCTACGCCAAGATCTTCCTCGCCTCCGTCGCCGGCTTCGTCCTCGTCACCGCCCTGATCCTG
CCCGAGGCCATCCTCATCGCCAGCAACTCGGCCCGCCTCGACTGA
Transcript >Hirsu2|8070
ATGGACGTCTCGCTCATCAAGAGGGCCGTTCTGGCCACCAGCGGCCACGACCCGTCCGACTACAAGCTGCCGCAG
TGGACCTGGATCGTGCTCGCTCTCGACCTCATCATCCTGCTCCCCGTCTGCGTCATTTTCAACTATACGCTCAAG
AACGTCTATCCCGTCTTCGCCATCATCGAAGACGAGACGCCCCCCGCCTACGAGCCCGTGGCCCTGCACGAAGGC
GACGACGCCGGCCGCCCAGCCAGCAGCATCATCAAGTCGGACAGCGCCGCCGGCGCCGGGGCCCGCTACGGCGGC
GGCGGCGACACGGGGTCGCTGCGCGGCATCAACCGGCTGCTCATGGCGCACGGCGGCGTGACGGCCAACCTGCGC
GGCCTGAGCTGCTACCTGGCGCAGTCGGCCATGACGACGGCGCTGGTGGCCGTCTTCGACTCGGCGCTGGGCGGC
CTGTTCACGCCGGTGGCGACGCTGCTGGCGGCGCTGGCGCTGGTGCAGTTCAGCGCGGCCTGGGTCCACGTGGTC
GTGACGCCGCCGTCGCCGCGGCGCTTCTGGCAGCGGCTGCCGCCCTTCCGGCGCGCCTTCGACGCCACCTGGCGG
CCCGTGACGCTGCACTGGTTCGCGTGCGAGGCGGCACGCTGGCTGCCGCTGGCGCTCGCCGGCCTCAGCGGCCTG
ACGCTGCCGGAGCTGCAGATCACGGGCGACCGCCAGGCCAGCGTGCACAGCCCGGACAACGTCTTCGTCGCCAAG
ACGCTGGCCCTCGCCCTCGCCACCCTGCTGGCCGCCCTCTTCCTCGTCGTGCCCACCGGCGTCGTCCTCGTCCGC
GTCCAGGCCTCGCTGCTGCCCGCCGGCGACGACGCCGTCGTCCCCTTCGACCGCTCCTTCGCCGGCCGCGTCGAG
TCGGCCCTCGTCGGCGGCCGCGGCTTCGCCTCCATGGCCGACGCCTGGCACACCTTTGGCCGCCCCGCCTGGCGC
CGCCTCCTCGTCCTCTACGCCAAGATCTTCCTCGCCTCCGTCGCCGGCTTCGTCCTCGTCACCGCCCTGATCCTG
CCCGAGGCCATCCTCATCGCCAGCAACTCGGCCCGCCTCGACTGA
Gene >Hirsu2|8070
ATGGACGTCTCGCTCATCAAGAGGGCCGTTCTGGCCACCAGCGGCCACGACCCGTCCGACTACAAGCTGCCGCAG
TGGACCTGGATCGTGCTCGCTCTCGACCTCATCATCCTGCTCCCCGTCTGCGTCATTGTAAGAGCCGTACCCCCT
ATCCTCCGTTCACGGAGACACAGCGCGAGAGGGGAAAAGAGAGGGGGGAGCAGCGTGACTGACCGACCCGTGCGT
CCAGTTCAACTATACGCTCAAGAACGTCTATCCCGTCTTCGCCATCATCGAAGACGAGACGCCCCCCGCCTACGA
GCCCGTGGCCCTGCACGAAGGCGACGACGCCGGCCGCCCAGCCAGCAGCATCATCAAGTCGGACAGCGCCGCCGG
CGCCGGGGCCCGCTACGGCGGCGGCGGCGACACGGGGTCGCTGCGCGGCATCAACCGGCTGCTCATGGCGCACGG
CGGCGTGACGGCCAACCTGCGCGGCCTGAGCTGCTACCTGGCGCAGTCGGCCATGACGACGGCGCTGGTGGCCGT
CTTCGACTCGGCGCTGGGCGGCCTGTTCACGCCGGTGGCGACGCTGCTGGCGGCGCTGGCGCTGGTGCAGTTCAG
CGCGGCCTGGGTCCACGTGGTCGTGACGCCGCCGTCGCCGCGGCGCTTCTGGCAGCGGCTGCCGCCCTTCCGGCG
CGCCTTCGACGCCACCTGGCGGCCCGTGACGCTGCACTGGTTCGCGTGCGAGGCGGCACGCTGGCTGCCGCTGGC
GCTCGCCGGCCTCAGCGGCCTGACGCTGCCGGAGCTGCAGATCACGGGCGACCGCCAGGCCAGCGTGCACAGCCC
GGACAACGTCTTCGTCGCCAAGACGCTGGCCCTCGCCCTCGCCACCCTGCTGGCCGCCCTCTTCCTCGTCGTGCC
CACCGGCGTCGTCCTCGTCCGCGTCCAGGCCTCGCTGCTGCCCGCCGGCGACGACGCCGTCGTCCCCTTCGACCG
CTCCTTCGCCGGCCGCGTCGAGTCGGCCCTCGTCGGCGGCCGCGGCTTCGCCTCCATGGCCGACGCCTGGCACAC
CTTTGGCCGCCCCGCCTGGCGCCGCCTCCTCGTCCTCTACGCCAAGATCTTCCTCGCCTCCGTCGCCGGCTTCGT
CCTCGTCACCGCCCTGATCCTGCCCGAGGCCATCCTCATCGCCAGCAACTCGGCCCGCCTCGACTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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