© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|8030 |
| Gene name | |
| Location | Contig_50:5451..5861 |
| Strand | - |
| Gene length (bp) | 410 |
| Transcript length (bp) | 321 |
| Coding sequence length (bp) | 321 |
| Protein length (aa) | 107 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Mitochondrion | 0.3222 | 0.3857 | 0.2434 | 0.1619 | 0.5241 | 0.1341 | 0.4197 | 0.339 | 0.2855 | 0.1006 |
| Orthofinder run ID | 4 |
| Orthogroup | 10522 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|8030 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|8030 MTTGGYKDHTWFLLAVGSLGLDFVAVHAHNKVKGALLETERAREHVRAAPWFTSPSQAPGPGSRDVQAGQGRKRG GGRNGEDDRGQGLGVVGRRWGLTSAGAINCP* |
| Coding | >Hirsu2|8030 ATGACCACCGGCGGCTACAAGGACCACACCTGGTTCCTGCTGGCCGTCGGCAGCCTCGGCCTCGACTTCGTCGCC GTCCACGCCCACAATAAGGTTAAGGGCGCGCTGTTGGAGACGGAACGCGCGCGCGAGCACGTCAGGGCCGCGCCA TGGTTCACGAGTCCTTCCCAGGCACCCGGGCCGGGGTCGCGAGATGTGCAGGCGGGCCAGGGAAGGAAGAGAGGC GGCGGTCGTAACGGAGAAGACGACCGCGGTCAGGGCCTCGGGGTCGTCGGACGACGCTGGGGCCTGACGAGCGCC GGAGCGATAAACTGTCCCTAG |
| Transcript | >Hirsu2|8030 ATGACCACCGGCGGCTACAAGGACCACACCTGGTTCCTGCTGGCCGTCGGCAGCCTCGGCCTCGACTTCGTCGCC GTCCACGCCCACAATAAGGTTAAGGGCGCGCTGTTGGAGACGGAACGCGCGCGCGAGCACGTCAGGGCCGCGCCA TGGTTCACGAGTCCTTCCCAGGCACCCGGGCCGGGGTCGCGAGATGTGCAGGCGGGCCAGGGAAGGAAGAGAGGC GGCGGTCGTAACGGAGAAGACGACCGCGGTCAGGGCCTCGGGGTCGTCGGACGACGCTGGGGCCTGACGAGCGCC GGAGCGATAAACTGTCCCTAG |
| Gene | >Hirsu2|8030 ATGACCACCGGCGGCTACAAGGACCACACCTGGTTCCTGCTGGCCGTCGGCAGCCTCGGCCTCGACTTCGTCGCC GTCCACGCCCACAATAAGGTTAAGGGCGCGCTGTTGGAGACGGAACGCGCGCGCGAGCACGTCAGGGCCGCGCCA TGGTTCACGAGTCCTTCCCAGGCACCCGGGCCGGGGTCGCGAGATGTGCAGGCGGGCCAGGGAAGGAAGAGAGGC GGCGGTCGTAACGGAGAAGACGACCGCGGTCAGGGCCTCGGGGTCGTCGGACGACGCTGGGGCCTGACGAGCGCC GGAGCGAGTATGATGTATGTAACTGTATCGGGAGGATAGAGGCAAGTAAACCGACGTGTGAGGGAGTACCAAAAT AGGGGCCGGCGGCGTGCCCAGTAAACTGTCCCTAG |