© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|8021 |
| Gene name | |
| Location | Contig_5:81437..82160 |
| Strand | - |
| Gene length (bp) | 723 |
| Transcript length (bp) | 723 |
| Coding sequence length (bp) | 723 |
| Protein length (aa) | 241 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF20493 | WD-like_fungi | Fungal WD-like | 3.9E-07 | 131 | 239 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.0827 | 0.0533 | 0.9518 | 0.0721 | 0.075 | 0.0179 | 0.1208 | 0.1436 | 0.1468 | 0.0029 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 22 | 0.997823 |
| Orthofinder run ID | 4 |
| Orthogroup | 10519 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|8021 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|8021 MMLLSAAPKLMALVALAASASAAAVAVTDSQEHEFNQQGFIVTHNAVDYFPHAKGDLSHWDVSVRYTGYNSSMES WLTGLDPGSGASDEDRARLLLAASYAKPFDHADADMDADHRALLDAVAGRQSDALEKRNSHYIVSKAHVVVWHAC SAFFSCVSGTTCSFNIDVGKAPRSRCQSQGGQNCCISWSTYKVQVGFFTRTWTNCNSEINNEHLSSASCEGKGDH TGGDVCLSNRASGCT* |
| Coding | >Hirsu2|8021 ATGATGCTTCTCTCCGCTGCGCCCAAGCTCATGGCCCTCGTGGCCTTGGCCGCTTCCGCCTCCGCCGCTGCCGTC GCGGTAACAGACAGCCAGGAACACGAATTTAACCAGCAAGGCTTCATCGTCACGCACAACGCCGTCGACTACTTC CCGCACGCCAAGGGCGACCTCAGCCACTGGGATGTGTCGGTCCGCTACACCGGCTACAACTCGTCCATGGAGTCG TGGCTCACGGGCCTCGACCCGGGCTCCGGCGCCTCGGACGAGGACCGGGCCCGGCTGCTGCTCGCCGCCTCCTAC GCGAAGCCCTTCGACCACGCCGACGCCGACATGGACGCCGACCACCGCGCCTTGCTCGACGCCGTCGCCGGCCGC CAGTCGGACGCGCTCGAGAAGCGCAACAGCCACTACATCGTGTCCAAGGCACACGTCGTTGTCTGGCACGCCTGC TCCGCCTTCTTCTCCTGCGTCTCCGGCACCACCTGCAGCTTCAACATCGACGTCGGCAAGGCCCCGCGCAGCCGG TGCCAGAGCCAGGGCGGCCAGAACTGCTGCATCTCCTGGTCCACCTACAAGGTCCAGGTTGGCTTCTTCACCCGC ACCTGGACCAACTGCAACTCCGAGATCAATAACGAGCACCTCAGCAGCGCTTCGTGCGAGGGCAAGGGAGACCAC ACGGGTGGCGATGTCTGCCTCAGCAATCGAGCTTCTGGCTGCACTTAA |
| Transcript | >Hirsu2|8021 ATGATGCTTCTCTCCGCTGCGCCCAAGCTCATGGCCCTCGTGGCCTTGGCCGCTTCCGCCTCCGCCGCTGCCGTC GCGGTAACAGACAGCCAGGAACACGAATTTAACCAGCAAGGCTTCATCGTCACGCACAACGCCGTCGACTACTTC CCGCACGCCAAGGGCGACCTCAGCCACTGGGATGTGTCGGTCCGCTACACCGGCTACAACTCGTCCATGGAGTCG TGGCTCACGGGCCTCGACCCGGGCTCCGGCGCCTCGGACGAGGACCGGGCCCGGCTGCTGCTCGCCGCCTCCTAC GCGAAGCCCTTCGACCACGCCGACGCCGACATGGACGCCGACCACCGCGCCTTGCTCGACGCCGTCGCCGGCCGC CAGTCGGACGCGCTCGAGAAGCGCAACAGCCACTACATCGTGTCCAAGGCACACGTCGTTGTCTGGCACGCCTGC TCCGCCTTCTTCTCCTGCGTCTCCGGCACCACCTGCAGCTTCAACATCGACGTCGGCAAGGCCCCGCGCAGCCGG TGCCAGAGCCAGGGCGGCCAGAACTGCTGCATCTCCTGGTCCACCTACAAGGTCCAGGTTGGCTTCTTCACCCGC ACCTGGACCAACTGCAACTCCGAGATCAATAACGAGCACCTCAGCAGCGCTTCGTGCGAGGGCAAGGGAGACCAC ACGGGTGGCGATGTCTGCCTCAGCAATCGAGCTTCTGGCTGCACTTAA |
| Gene | >Hirsu2|8021 ATGATGCTTCTCTCCGCTGCGCCCAAGCTCATGGCCCTCGTGGCCTTGGCCGCTTCCGCCTCCGCCGCTGCCGTC GCGGTAACAGACAGCCAGGAACACGAATTTAACCAGCAAGGCTTCATCGTCACGCACAACGCCGTCGACTACTTC CCGCACGCCAAGGGCGACCTCAGCCACTGGGATGTGTCGGTCCGCTACACCGGCTACAACTCGTCCATGGAGTCG TGGCTCACGGGCCTCGACCCGGGCTCCGGCGCCTCGGACGAGGACCGGGCCCGGCTGCTGCTCGCCGCCTCCTAC GCGAAGCCCTTCGACCACGCCGACGCCGACATGGACGCCGACCACCGCGCCTTGCTCGACGCCGTCGCCGGCCGC CAGTCGGACGCGCTCGAGAAGCGCAACAGCCACTACATCGTGTCCAAGGCACACGTCGTTGTCTGGCACGCCTGC TCCGCCTTCTTCTCCTGCGTCTCCGGCACCACCTGCAGCTTCAACATCGACGTCGGCAAGGCCCCGCGCAGCCGG TGCCAGAGCCAGGGCGGCCAGAACTGCTGCATCTCCTGGTCCACCTACAAGGTCCAGGTTGGCTTCTTCACCCGC ACCTGGACCAACTGCAACTCCGAGATCAATAACGAGCACCTCAGCAGCGCTTCGTGCGAGGGCAAGGGAGACCAC ACGGGTGGCGATGTCTGCCTCAGCAATCGAGCTTCTGGCTGCACTTAA |