Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8019
Gene name
LocationContig_5:69584..70794
Strand-
Gene length (bp)1210
Transcript length (bp)1098
Coding sequence length (bp)1098
Protein length (aa) 366

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13343 SBP_bac_6 Bacterial extracellular solute-binding protein 1.3E-10 115 299

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8019
MTRLLHVAAALLVGGVVASDRILGFEASPVAETRSLDEIYEAAKKEGGAVTLWHGGDEEHMVDFIKQEFETRFPD
LKLNLTVDLSKYHSSRIDEQLAKSSVYVDSVILQTLHDYPRWAQQGALLNYAPQGFDQIHSGFKDTTSASYYGLE
IFYWTNVWNPQRLPNADFDTFDEYLKPEYKDKLVFTYPNDDDAILFAFNLVMQRKGTAWFDALLAQNPRWVRGTN
TPLTLVQRDNETVSATFGVYTPLSGAKGVNNSFPTDADFVSWPQMGAILKDAPHPESAKLLHNFMLSPDFQKKLG
WSVRMDMDAPEGFRKIMDTNHTNPLAFASFMADRVTVERLRFWFESRLGTAQGESPLTDAIVPPQ*
Coding >Hirsu2|8019
ATGACTCGACTCCTTCACGTTGCCGCCGCCCTGCTCGTAGGGGGGGTAGTTGCGAGCGATCGCATTCTTGGATTC
GAGGCCAGCCCCGTCGCCGAAACCCGCTCGCTCGACGAGATTTACGAAGCGGCGAAGAAGGAGGGCGGTGCCGTG
ACCCTATGGCACGGCGGTGACGAAGAGCATATGGTGGATTTCATCAAGCAGGAATTCGAGACTCGATTTCCGGAC
CTGAAGCTCAACCTCACAGTCGATCTATCGAAGTACCACTCCAGCAGAATCGATGAGCAACTAGCCAAAAGCAGC
GTCTACGTCGACAGCGTCATCCTGCAAACACTCCACGACTATCCGCGGTGGGCGCAACAGGGCGCTCTCCTCAAC
TACGCGCCTCAGGGCTTCGACCAGATCCACAGCGGCTTCAAGGACACGACGTCGGCTTCGTATTATGGGCTCGAG
ATCTTTTACTGGACCAATGTCTGGAATCCGCAGCGGCTACCGAACGCCGACTTTGACACCTTTGACGAGTACCTC
AAGCCGGAGTATAAGGACAAGTTGGTCTTTACTTACCCTAACGACGACGACGCGATTCTCTTCGCCTTCAATCTC
GTAATGCAGCGCAAGGGCACGGCCTGGTTTGATGCTCTCCTGGCGCAGAACCCGCGATGGGTCCGTGGAACGAAC
ACGCCCCTGACGCTGGTTCAGCGGGACAACGAGACTGTCTCGGCGACGTTTGGCGTCTACACGCCTCTGAGCGGC
GCGAAAGGCGTCAACAACTCATTTCCTACCGATGCCGACTTCGTCAGCTGGCCTCAGATGGGCGCGATCCTCAAG
GACGCCCCACATCCCGAGAGCGCGAAGCTGCTGCACAACTTTATGCTGAGCCCCGACTTCCAGAAGAAGCTGGGC
TGGAGTGTGCGAATGGACATGGACGCGCCCGAGGGGTTCCGCAAGATCATGGATACGAATCACACGAATCCTCTT
GCGTTCGCGTCGTTCATGGCCGACCGCGTCACGGTGGAGAGGCTCAGGTTCTGGTTCGAGAGCCGGCTGGGCACG
GCGCAGGGGGAGTCTCCCTTGACCGACGCTATCGTGCCCCCGCAGTGA
Transcript >Hirsu2|8019
ATGACTCGACTCCTTCACGTTGCCGCCGCCCTGCTCGTAGGGGGGGTAGTTGCGAGCGATCGCATTCTTGGATTC
GAGGCCAGCCCCGTCGCCGAAACCCGCTCGCTCGACGAGATTTACGAAGCGGCGAAGAAGGAGGGCGGTGCCGTG
ACCCTATGGCACGGCGGTGACGAAGAGCATATGGTGGATTTCATCAAGCAGGAATTCGAGACTCGATTTCCGGAC
CTGAAGCTCAACCTCACAGTCGATCTATCGAAGTACCACTCCAGCAGAATCGATGAGCAACTAGCCAAAAGCAGC
GTCTACGTCGACAGCGTCATCCTGCAAACACTCCACGACTATCCGCGGTGGGCGCAACAGGGCGCTCTCCTCAAC
TACGCGCCTCAGGGCTTCGACCAGATCCACAGCGGCTTCAAGGACACGACGTCGGCTTCGTATTATGGGCTCGAG
ATCTTTTACTGGACCAATGTCTGGAATCCGCAGCGGCTACCGAACGCCGACTTTGACACCTTTGACGAGTACCTC
AAGCCGGAGTATAAGGACAAGTTGGTCTTTACTTACCCTAACGACGACGACGCGATTCTCTTCGCCTTCAATCTC
GTAATGCAGCGCAAGGGCACGGCCTGGTTTGATGCTCTCCTGGCGCAGAACCCGCGATGGGTCCGTGGAACGAAC
ACGCCCCTGACGCTGGTTCAGCGGGACAACGAGACTGTCTCGGCGACGTTTGGCGTCTACACGCCTCTGAGCGGC
GCGAAAGGCGTCAACAACTCATTTCCTACCGATGCCGACTTCGTCAGCTGGCCTCAGATGGGCGCGATCCTCAAG
GACGCCCCACATCCCGAGAGCGCGAAGCTGCTGCACAACTTTATGCTGAGCCCCGACTTCCAGAAGAAGCTGGGC
TGGAGTGTGCGAATGGACATGGACGCGCCCGAGGGGTTCCGCAAGATCATGGATACGAATCACACGAATCCTCTT
GCGTTCGCGTCGTTCATGGCCGACCGCGTCACGGTGGAGAGGCTCAGGTTCTGGTTCGAGAGCCGGCTGGGCACG
GCGCAGGGGGAGTCTCCCTTGACCGACGCTATCGTGCCCCCGCAGTGA
Gene >Hirsu2|8019
ATGACTCGACTCCTTCACGTTGCCGCCGCCCTGCTCGTAGGGGGGGTAGTTGCGAGCGATCGCATTCTTGGATTC
GAGGCCAGCCCCGTCGCCGAAACCCGCTCGCTCGACGAGATTTACGAAGCGGCGAAGAAGGAGGGCGGTGCCGTG
ACCCTATGGCACGGCGGTGACGAAGAGCATATGGTGGATTTCATCAAGCAGGAATTCGAGACTCGATTTCCGGAC
CTGAAGCTCAACCTCACAGTCGATCTATCGAAGTACCACTCCAGCAGAATCGATGAGCAACTAGCCAAAAGCAGC
GTCTACGTCGACAGCGTCATCCTGCAAACACTCCACGACTATCCGCGGTGGGCGCAACAGGGCGCTCTCCTCAAC
TACGCGCCTCAGGGCTTCGACCAGATCCACAGCGGCTTCAAGGACACGACGTCGGCTTCGTATTATGGGCTCGAG
ATCTTTTACTGGACCAATGTCTGGAATCCGCAGCGGCTACCGAACGCCGACTTTGACACCTTTGACGAGTACCTC
AAGCCGGAGTATAAGGACAAGTTGGTCTTTACTTACCCTAACGACGACGACGCGATTCTCTTCGCCTTCAATCTC
GTGTAGGTCATGTACCCGTACACACACACTCTTTCTCCTTTCAGTGCAATTCGTAATGCCCGGGCGGGTGCGCGG
CGGCTCGACAGACGCTGACTTGGCGCGTCACCTCCACAGAATGCAGCGCAAGGGCACGGCCTGGTTTGATGCTCT
CCTGGCGCAGAACCCGCGATGGGTCCGTGGAACGAACACGCCCCTGACGCTGGTTCAGCGGGACAACGAGACTGT
CTCGGCGACGTTTGGCGTCTACACGCCTCTGAGCGGCGCGAAAGGCGTCAACAACTCATTTCCTACCGATGCCGA
CTTCGTCAGCTGGCCTCAGATGGGCGCGATCCTCAAGGACGCCCCACATCCCGAGAGCGCGAAGCTGCTGCACAA
CTTTATGCTGAGCCCCGACTTCCAGAAGAAGCTGGGCTGGAGTGTGCGAATGGACATGGACGCGCCCGAGGGGTT
CCGCAAGATCATGGATACGAATCACACGAATCCTCTTGCGTTCGCGTCGTTCATGGCCGACCGCGTCACGGTGGA
GAGGCTCAGGTTCTGGTTCGAGAGCCGGCTGGGCACGGCGCAGGGGGAGTCTCCCTTGACCGACGCTATCGTGCC
CCCGCAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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