Protein ID | Hirsu2|8007 |
Gene name | |
Location | Contig_5:36626..39036 |
Strand | + |
Gene length (bp) | 2410 |
Transcript length (bp) | 1578 |
Coding sequence length (bp) | 1578 |
Protein length (aa) | 526 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF06824 | Glyco_hydro_125 | Metal-independent alpha-mannosidase (GH125) | 8.8E-148 | 91 | 500 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q10449|MU157_SCHPO | Meiotically up-regulated gene 157 protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug157 PE=1 SV=1 | 39 | 513 | 2.0E-129 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.0958 | 0.0627 | 0.8296 | 0.0718 | 0.0888 | 0.0233 | 0.4075 | 0.3648 | 0.2267 | 0.0132 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 19 | 0.998063 |
CAZyme category | E-value | Start | End |
---|---|---|---|
GH125 | 3.3E-127 | 91 | 500 |
Orthofinder run ID | 4 |
Orthogroup | 313 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|8007 MPAPVRRHVGLASLSLLLACFTPPTVQQGSSARSRTPAACPDYTNYAQSPHGPNSEGRLGLPFMRPSPECRTFNS PAVENVINDMKDRLKDPDLARLFENTFPSTLDTTVKYFDPEANLAFIVTGDITAQWLRDTGNQFAHLYRLLPQDE NLKALVKAVINTESRYISQYPYCGAFQPPKESGLPPSVNDYATKVVVNPPVDNQTVFECKYELDSLAGFLKICRS YYANTKDSSFINDNWKEAITQILRVLDEQSQSSWTDDWQFISYYNWTGTAGSLAPPVPNGGNGEPKRANGLVASS HRPSDDQCVFNFITSDNAMMSVELGHVADMLNRVGSLKDVSDRLSHYSRVIRDAVWAHTRTQDGIFAYETNGYGG QYIMDDANVPSLVSLPYLGFLGRDDRTYQKTKQAMFSGANPYYAVGKFSGIGGPHVRATYPWPMSQISGVFGTDD DAEIRERLSLILENTSGLGLIHESINIHNPNDFTRPWFAWANSYFAEMLLDLAERKPGLIFKDDKPYVIGKEGKQ * |
Coding | >Hirsu2|8007 ATGCCCGCGCCAGTCCGCCGGCACGTTGGCCTTGCCAGCCTCAGCCTGCTGCTCGCCTGCTTCACGCCGCCGACA GTCCAGCAGGGCTCGTCTGCCCGGAGCCGGACGCCGGCCGCGTGCCCGGACTACACCAACTATGCCCAAAGCCCG CACGGCCCCAACTCGGAGGGCCGGCTCGGGCTGCCGTTCATGAGGCCTAGCCCCGAGTGCCGGACGTTCAACAGC CCGGCTGTCGAGAACGTCATCAATGACATGAAAGACCGGCTCAAAGACCCCGATCTGGCCAGACTTTTCGAAAAC ACCTTTCCATCCACTCTGGACACCACTGTCAAGTACTTTGATCCCGAGGCTAACCTGGCATTCATCGTCACCGGG GATATCACCGCCCAATGGCTTCGCGACACCGGAAACCAGTTCGCGCATTTGTATAGGCTGCTGCCCCAGGACGAG AACCTCAAGGCGCTGGTCAAGGCCGTCATTAACACCGAGTCGCGCTACATCTCCCAGTATCCTTACTGCGGTGCA TTCCAGCCCCCAAAAGAGAGCGGATTGCCGCCCAGCGTCAATGATTACGCGACGAAAGTAGTTGTGAACCCGCCG GTCGACAATCAGACCGTATTTGAATGCAAGTACGAGCTTGACTCTCTTGCCGGGTTTCTGAAGATCTGTAGATCT TACTACGCCAACACCAAAGACAGTTCCTTCATCAACGACAACTGGAAGGAGGCCATAACGCAGATCTTAAGGGTC CTGGACGAACAATCGCAAAGCTCCTGGACGGATGACTGGCAGTTCATCAGCTACTACAACTGGACAGGTACGGCT GGATCTCTGGCTCCTCCGGTGCCCAACGGCGGCAACGGCGAGCCAAAGCGAGCCAACGGCCTCGTCGCCTCGAGC CACCGACCATCCGACGACCAATGTGTCTTCAATTTCATCACCTCGGATAATGCCATGATGTCGGTCGAGCTCGGC CACGTTGCCGATATGCTGAATCGGGTCGGCTCTCTCAAAGACGTGTCGGACAGGTTGAGCCATTACTCGCGTGTT ATCAGGGACGCCGTCTGGGCCCATACGCGCACCCAAGACGGCATCTTCGCCTACGAGACCAACGGCTACGGCGGA CAGTACATCATGGACGATGCCAACGTGCCCAGCCTCGTCTCCCTCCCCTACCTGGGCTTCCTAGGGCGAGATGAC CGGACGTACCAGAAGACAAAACAGGCCATGTTTTCAGGTGCAAACCCGTATTACGCAGTCGGGAAATTCAGTGGC ATCGGGGGACCACACGTGCGAGCCACCTACCCCTGGCCCATGTCTCAGATTTCGGGGGTGTTCGGGACCGACGAC GACGCGGAAATTCGGGAACGGCTGTCACTCATTCTCGAGAACACCTCCGGGCTGGGCTTGATCCACGAGAGCATT AACATTCACAACCCCAACGACTTCACGCGTCCATGGTTCGCCTGGGCGAACAGCTACTTTGCGGAGATGCTGCTA GATCTGGCTGAGCGGAAGCCAGGACTCATCTTCAAAGACGACAAGCCCTATGTGATCGGGAAGGAAGGCAAGCAG TGA |
Transcript | >Hirsu2|8007 ATGCCCGCGCCAGTCCGCCGGCACGTTGGCCTTGCCAGCCTCAGCCTGCTGCTCGCCTGCTTCACGCCGCCGACA GTCCAGCAGGGCTCGTCTGCCCGGAGCCGGACGCCGGCCGCGTGCCCGGACTACACCAACTATGCCCAAAGCCCG CACGGCCCCAACTCGGAGGGCCGGCTCGGGCTGCCGTTCATGAGGCCTAGCCCCGAGTGCCGGACGTTCAACAGC CCGGCTGTCGAGAACGTCATCAATGACATGAAAGACCGGCTCAAAGACCCCGATCTGGCCAGACTTTTCGAAAAC ACCTTTCCATCCACTCTGGACACCACTGTCAAGTACTTTGATCCCGAGGCTAACCTGGCATTCATCGTCACCGGG GATATCACCGCCCAATGGCTTCGCGACACCGGAAACCAGTTCGCGCATTTGTATAGGCTGCTGCCCCAGGACGAG AACCTCAAGGCGCTGGTCAAGGCCGTCATTAACACCGAGTCGCGCTACATCTCCCAGTATCCTTACTGCGGTGCA TTCCAGCCCCCAAAAGAGAGCGGATTGCCGCCCAGCGTCAATGATTACGCGACGAAAGTAGTTGTGAACCCGCCG GTCGACAATCAGACCGTATTTGAATGCAAGTACGAGCTTGACTCTCTTGCCGGGTTTCTGAAGATCTGTAGATCT TACTACGCCAACACCAAAGACAGTTCCTTCATCAACGACAACTGGAAGGAGGCCATAACGCAGATCTTAAGGGTC CTGGACGAACAATCGCAAAGCTCCTGGACGGATGACTGGCAGTTCATCAGCTACTACAACTGGACAGGTACGGCT GGATCTCTGGCTCCTCCGGTGCCCAACGGCGGCAACGGCGAGCCAAAGCGAGCCAACGGCCTCGTCGCCTCGAGC CACCGACCATCCGACGACCAATGTGTCTTCAATTTCATCACCTCGGATAATGCCATGATGTCGGTCGAGCTCGGC CACGTTGCCGATATGCTGAATCGGGTCGGCTCTCTCAAAGACGTGTCGGACAGGTTGAGCCATTACTCGCGTGTT ATCAGGGACGCCGTCTGGGCCCATACGCGCACCCAAGACGGCATCTTCGCCTACGAGACCAACGGCTACGGCGGA CAGTACATCATGGACGATGCCAACGTGCCCAGCCTCGTCTCCCTCCCCTACCTGGGCTTCCTAGGGCGAGATGAC CGGACGTACCAGAAGACAAAACAGGCCATGTTTTCAGGTGCAAACCCGTATTACGCAGTCGGGAAATTCAGTGGC ATCGGGGGACCACACGTGCGAGCCACCTACCCCTGGCCCATGTCTCAGATTTCGGGGGTGTTCGGGACCGACGAC GACGCGGAAATTCGGGAACGGCTGTCACTCATTCTCGAGAACACCTCCGGGCTGGGCTTGATCCACGAGAGCATT AACATTCACAACCCCAACGACTTCACGCGTCCATGGTTCGCCTGGGCGAACAGCTACTTTGCGGAGATGCTGCTA GATCTGGCTGAGCGGAAGCCAGGACTCATCTTCAAAGACGACAAGCCCTATGTGATCGGGAAGGAAGGCAAGCAG TGA |
Gene | >Hirsu2|8007 ATGCCCGCGCCAGTCCGCCGGCACGTTGGCCTTGCCAGCCTCAGCCTGCTGCTCGCCTGCTTCACGCCGCCGACA GTCCAGCAGGGCTCGTCTGCCCGGAGCCGGACGCCGGCCGCGTGCCCGGACTACACCAACTATGCCCAAAGCCCG CACGGCCCCAACTCGGAGGGCCGGCTCGGGCTGCCGTTCATGAGGCCTAGCCCCGAGTGCCGGACGTTCAACAGC CCGGCTGTCGAGGTAAGTCATGCCTTCGATTCTCGTCCGGGACACGGCATGAGAGGATGGTATCAATGGCATGCT AACAAAATGCTTACCGAGTGGAACCGGTCCTCGCGTCTGGTTTGTACATGTAGAACGTCATCAATGACATGAAAG ACCGGCTCAAAGACCCCGATCTGGCCAGACTTTTCGAAAACACCTTTCCATCCACTCTGGACACCACTGTCAAGT ACTTTGATCCCGAGGCTAACCTGGCATTCATCGTCACCGGGGTAAGCGCTCTCCTCGTTGCGTCATTGCACCTCG GCCGGTGCCAAGAAACGAGATCTAAACTAAACTTCCCAATCAACGCAGGATATCACGTCGGTTTGCCACCGTGCC ATCGCGTGCAGGATGCGATAGCTGACTTGGAGGCCCGAGAAAGCGCCCAATGGCTTCGCGACACCGGAAACCAGT TCGCGCATTTGTATAGGCTGCTGCCCCAGGACGAGAACCTCAAGGCGCTGGTCAAGGCCGTCATTAACACCGAGT CGCGCTACATCTCCCAGTATCCTTACTGCGGTGAGTACCTCGCGACAGATCCTCGGACGAACAAAGTCCAAGGTG AAGGCTGACACCTCCCGCAAAGGTGCATTCCAGCCCCCAAAAGAGAGCGGATTGCCGCCCAGCGTCAATGTCAGC ATCCGGGCGGCGTCATGCTGCGGTCCGCCCTTTCATCTTCTGGACGAGATCCTCTGACAGTGTTGTCTTCAATAG GATTACGCGACGAAAGTAGTTGTGAACCCGTACGTCAGACCCTGCAAGATGATGATGACTTTCTCAGCTACTTAC TGAAACCTATTGGCAGGCCGGTCGACAATCAGACCGTATTTGAATGCAAGGTACTTCCGTCCTTCGACCGAACCG GAGGCAAAGAGGAAGAATCCTAACCACACTTGTTTCAATGTTTTTCAGTACGAGCTTGACTCTCTTGCCGGGTTT CTGAAGATCTGTAGATCTTACTACGCCAACACCAAAGACAGTTCCTTCATCAACGACAACTGTGAGCGTCGCGAG CCCTGCGCAAACGCAGTGCAAGTTCTTGTAGTGCTCATATCATCCCAGGGAAGGAGGCCATAACGCAGATCTTAA GGGTCCTGGACGAACAATCGCAAAGCTCCTGGACGGATGACTGGCAGTTCATCAGCTACTACAACTGGACAGGTA CGGCTGGATCTCTGGCTCCTCCGGTGCCCAACGGCGGCAACGGCGAGCCAAAGCGAGCCAACGGCCTCGTCGCCT CGAGCCACCGACCATCCGACGACCAATGTGTCTTCAGTACGTCGTCGTCCCTCCTCCGGCAGACGGATGAGATGT TTCTAACGGCCCGTTGCCAGATTTCATCACCTCGGATAATGCCATGATGTCGGTCGAGCTCGGCCACGTTGCCGA TATGCTGAATCGGGTCGGCTCTCTCAAAGACGTGTCGGACAGGTTGAGCCATTACTCGCGTGTTATCAGGGACGC CGTCTGGGCCCATACGCGCACCCAAGACGGCATCTTCGCCTACGAGACCAACGGCTACGGCGGACAGTACATCAT GGACGATGCCAACGTGCCCAGCCTCGTCTCCCTCCCCTACCTGGGCTTCCTAGGGCGAGATGACCGGACGTACCA GAAGACAAAACAGGCCATGTTTTCAGGTGCAAACCCGTATTACGCAGTCGGGAAATTCAGTGGCATCGGGTGAGT TTCCACATGCACCAGACCTCAACCCGATTCCGCGGCCGCTCAAGGAAGAATCCACGTGGTTCGAATGAGGCGGCA AGAGAAGAATCCGATGAAACCCATGCCCATGGGTATCCATAGAGAGGCGAGCTCGAGGCTGACGGACATTCCACT CGTTCTTTCTAGGGGACCACACGTGCGAGCCACCTACCCCTGGCCCATGTCTCAGATTTCGGGGGTGTTCGGGAC CGACGACGACGCGGAAATTCGGGAACGGCTGTCACTCATTCTCGAGAACACCTCCGGGCTGGGCTTGATCCACGA GAGCATTAACATTCACAACCCCAACGACTTCACGCGTCCATGGTTCGCCTGGGCGAACAGCTACTTTGCGGAGAT GCTGCTAGATCTGGCTGAGCGGAAGCCAGGACTCATCTTCAAAGACGACAAGCCCTATGTGATCGGGAAGGAAGG CAAGCAGTGA |