© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|8005 |
| Gene name | |
| Location | Contig_5:28965..30185 |
| Strand | + |
| Gene length (bp) | 1220 |
| Transcript length (bp) | 1098 |
| Coding sequence length (bp) | 1098 |
| Protein length (aa) | 366 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1811 | 0.0863 | 0.864 | 0.1695 | 0.1392 | 0.077 | 0.281 | 0.2622 | 0.2348 | 0.0013 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 20 | 0.999703 |
| Orthofinder run ID | 4 |
| Orthogroup | 6615 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps australis map64 (Brazil) | OphauB2|3447 |
| Ophiocordyceps subramaniannii | Hirsu2|3758 |
| Ophiocordyceps subramaniannii | Hirsu2|8005 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|8005 MMKTYLLLSAVAFCAATVRCAASACVICTKTPNLVNVEPRPTSPGGWHYMYGGLVGSDWCISVVGKKFKVPAWCE RYLGTERFCKETAKTAKKRKDCINARKSPPFWDENVLTDAECKVDSARETEKCMGTTKWCKRKAIQALYGPENAC VQHRNRTERPFMPWTYGSKSHCDMMDTLATTCQVTFNYWHYGSQVRNFCRDGDCGAWWGRMDMSYWLQKYRHPKN YDEEERWRKTNKNWDTLNKEADELTGAEWRVACARVVSEREACQLDPNRDLPLMRLPTWRREAAIQLYKDKMKKP LKLIGSPDPYKIHKSFRDEAEWERAGGKVVKQAWRLRLLKLEDDRPRWEDWFSSLMNMTGLAQGR* |
| Coding | >Hirsu2|8005 ATGATGAAAACATACCTTCTTCTCAGTGCAGTCGCCTTTTGCGCGGCCACAGTCCGCTGTGCCGCGTCCGCTTGT GTCATCTGCACAAAGACACCTAATTTGGTCAACGTTGAGCCCAGACCGACGTCTCCTGGAGGTTGGCATTACATG TATGGTGGCTTGGTCGGCAGCGACTGGTGCATATCAGTCGTTGGAAAGAAATTCAAGGTCCCGGCCTGGTGTGAG AGGTATCTTGGAACAGAAAGGTTTTGCAAAGAGACGGCGAAGACGGCGAAGAAAAGAAAAGATTGCATAAATGCC AGGAAAAGCCCCCCCTTCTGGGATGAGAATGTCCTGACAGACGCCGAGTGTAAAGTCGACTCGGCGCGTGAAACG GAAAAGTGCATGGGGACCACAAAGTGGTGCAAAAGAAAGGCTATCCAAGCACTCTACGGGCCAGAAAACGCATGT GTGCAACATCGAAATAGGACAGAGCGGCCTTTCATGCCCTGGACGTACGGAAGCAAGAGCCACTGCGACATGATG GATACGTTGGCGACGACATGTCAGGTTACCTTTAACTATTGGCACTACGGCTCACAGGTGCGGAACTTCTGCCGA GACGGAGACTGCGGCGCGTGGTGGGGGAGGATGGATATGAGCTACTGGCTTCAGAAGTATCGCCACCCAAAGAAT TACGACGAAGAGGAGCGGTGGAGAAAAACGAACAAGAATTGGGACACGCTAAATAAGGAAGCAGATGAACTGACA GGGGCAGAATGGCGAGTTGCGTGCGCGCGCGTAGTGTCAGAAAGGGAAGCCTGCCAACTCGACCCAAACAGAGAC CTCCCGCTGATGCGATTGCCAACCTGGAGACGTGAGGCGGCTATACAGTTGTACAAAGACAAGATGAAAAAACCA CTCAAACTAATAGGCTCGCCCGACCCTTATAAAATTCACAAAAGCTTCCGGGACGAGGCAGAGTGGGAGAGAGCC GGGGGCAAGGTAGTAAAGCAGGCCTGGAGGTTGAGGCTTTTGAAACTGGAAGATGACCGCCCGAGGTGGGAGGAC TGGTTCTCTAGTCTCATGAATATGACAGGGCTCGCGCAGGGCAGATGA |
| Transcript | >Hirsu2|8005 ATGATGAAAACATACCTTCTTCTCAGTGCAGTCGCCTTTTGCGCGGCCACAGTCCGCTGTGCCGCGTCCGCTTGT GTCATCTGCACAAAGACACCTAATTTGGTCAACGTTGAGCCCAGACCGACGTCTCCTGGAGGTTGGCATTACATG TATGGTGGCTTGGTCGGCAGCGACTGGTGCATATCAGTCGTTGGAAAGAAATTCAAGGTCCCGGCCTGGTGTGAG AGGTATCTTGGAACAGAAAGGTTTTGCAAAGAGACGGCGAAGACGGCGAAGAAAAGAAAAGATTGCATAAATGCC AGGAAAAGCCCCCCCTTCTGGGATGAGAATGTCCTGACAGACGCCGAGTGTAAAGTCGACTCGGCGCGTGAAACG GAAAAGTGCATGGGGACCACAAAGTGGTGCAAAAGAAAGGCTATCCAAGCACTCTACGGGCCAGAAAACGCATGT GTGCAACATCGAAATAGGACAGAGCGGCCTTTCATGCCCTGGACGTACGGAAGCAAGAGCCACTGCGACATGATG GATACGTTGGCGACGACATGTCAGGTTACCTTTAACTATTGGCACTACGGCTCACAGGTGCGGAACTTCTGCCGA GACGGAGACTGCGGCGCGTGGTGGGGGAGGATGGATATGAGCTACTGGCTTCAGAAGTATCGCCACCCAAAGAAT TACGACGAAGAGGAGCGGTGGAGAAAAACGAACAAGAATTGGGACACGCTAAATAAGGAAGCAGATGAACTGACA GGGGCAGAATGGCGAGTTGCGTGCGCGCGCGTAGTGTCAGAAAGGGAAGCCTGCCAACTCGACCCAAACAGAGAC CTCCCGCTGATGCGATTGCCAACCTGGAGACGTGAGGCGGCTATACAGTTGTACAAAGACAAGATGAAAAAACCA CTCAAACTAATAGGCTCGCCCGACCCTTATAAAATTCACAAAAGCTTCCGGGACGAGGCAGAGTGGGAGAGAGCC GGGGGCAAGGTAGTAAAGCAGGCCTGGAGGTTGAGGCTTTTGAAACTGGAAGATGACCGCCCGAGGTGGGAGGAC TGGTTCTCTAGTCTCATGAATATGACAGGGCTCGCGCAGGGCAGATGA |
| Gene | >Hirsu2|8005 ATGATGAAAACATACCTTCTTCTCAGTGCAGTCGCCTTTTGCGCGGCCACAGTCCGCTGTGCCGCGTCCGCTTGT GTCATCTGCACAAAGACACCTAATTTGGTCAACGTTGAGCCCAGACCGACGGTAAGACTTCGTAAACCTGCTTTC GCAATTTCCGGCGCACTCTTTAACGGCACATCCTCAGTCTCCTGGAGGTTGGCATTACATGTATGGTGGCTTGGT CGGCAGCGACTGGTGCATATCAGTCGTTGGAAAGAAATTCAAGGTCCCGGCCTGGTGTGAGAGGTATCTTGGAAC AGAAAGGTTTTGCAAAGAGACGGCGAAGACGGCGAAGAAAAGAAAAGATTGCATAAATGCCAGGAAAAGCCCCCC CTTCTGGGATGAGAATGTCCTGACAGACGCCGAGTGTAAAGTCGACTCGGCGCGTGAAACGGAAAAGTGCATGGG GACCACAAAGTGGTGCAAAAGAAAGGCTATCCAAGCACTCTACGGGCCAGAAAACGCATGTGTGCAACATCGAAA TAGGACAGAGCGGCCTTTCATGCCCTGGACGTACGGAAGCAAGAGCCACTGCGACATGATGGATACGTTGGCGAC GACATGTCAGGTTACCTTTAACTATTGGCACTACGGCTCACAGGTGCGGAACTTCTGCCGAGACGGAGACTGCGG CGCGTGGTGGGGGAGGATGGATATGAGCTACTGGCTTCAGAAGTATCGCCACCCAAAGAATTACGACGAAGAGGA GCGGTGGAGAAAAACGAACAAGAATTGGGACACGCTAAATAAGGAAGCAGATGAACTGACAGGGGCAGAATGGCG AGTTGCGTGCGCGCGCGTAGTGTCAGAAAGGGAAGCCTGCCAAGTGAGTACCGAGTCGCAAACGTGGACAGCTTG AAGCATTGAAGACTAACAGCGCGGCCCAGCTCGACCCAAACAGAGACCTCCCGCTGATGCGATTGCCAACCTGGA GACGTGAGGCGGCTATACAGTTGTACAAAGACAAGATGAAAAAACCACTCAAACTAATAGGCTCGCCCGACCCTT ATAAAATTCACAAAAGCTTCCGGGACGAGGCAGAGTGGGAGAGAGCCGGGGGCAAGGTAGTAAAGCAGGCCTGGA GGTTGAGGCTTTTGAAACTGGAAGATGACCGCCCGAGGTGGGAGGACTGGTTCTCTAGTCTCATGAATATGACAG GGCTCGCGCAGGGCAGATGA |