Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|8003
Gene name
Location	Contig_5:22280..23468
Strand	-
Gene length (bp)	1188
Transcript length (bp)	1188
Coding sequence length (bp)	1188
Protein length (aa)	396

Overview

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04616	Glyco_hydro_43	Glycosyl hydrolases family 43	8.2E-34	48	331

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P82594\|IABF_STRCX	Extracellular exo-alpha-(1->5)-L-arabinofuranosidase OS=Streptomyces chartreusis PE=1 SV=1	64	333	2.0E-22

GO

GO Term	Description	Terminal node
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	Yes
GO:0005975	carbohydrate metabolic process	Yes
GO:0016798	hydrolase activity, acting on glycosyl bonds	No
GO:0071704	organic substance metabolic process	No
GO:0008152	metabolic process	No
GO:0003824	catalytic activity	No
GO:0044238	primary metabolic process	No
GO:0008150	biological_process	No
GO:0016787	hydrolase activity	No
GO:0003674	molecular_function	No

Deeploc

[Help with interpreting the results of Deeploc 2.0]

Localizations	Signals	Cytoplasm	Nucleus	Extracellular	Cell membrane	Mitochondrion	Plastid	Endoplasmic reticulum	Lysosome vacuole	Golgi apparatus	Peroxisome
Extracellular	Signal peptide	0.2599	0.1236	0.7513	0.2212	0.0899	0.0818	0.4277	0.4336	0.3197	0.0202

SignalP

SignalP signal predicted	Location	Score
Yes	1 - 27	0.99977

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

CAZyme category	E-value	Start	End
GH43_26	5.7E-79	49	338

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	4
Orthogroup	6268
Change Orthofinder run

Species	Protein ID
Ophiocordyceps camponoti-floridani	Ophcf2\|01116
Ophiocordyceps camponoti-rufipedis	Ophun1\|7191
Ophiocordyceps kimflemingae	Ophio5\|3622
Ophiocordyceps subramaniannii	Hirsu2\|8003 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|8003 MEVRNPLRLLLLTILFLITIRTAQIQAGGEERRPSSSSASTGSTMSNKPICDCDTPDPWILAANGKFYFTFTLGN RVEIWASSQLENFHGCQKAVVWQPAPGSPWSEDVWAPELHQLNGKWYIYTCAAPPGVGNPGHRTLVLESDKKDPM DPAGWKFLGPLKGMPDHWSIDATAFSTDGHDLYLCWSGWPPGDHSDKQQNLFVARMASPVEVVPDTAVCVCHADQ PWERPDDGSRGVAEGPTWVNFPGFRGIVYSAYGSWTSEYKLGLLALVGKDPLRPESWSKRPAPLLVSDKDHGGPF GPGHASFLPSPYNDGRLFCVYHGTANYGEGWGNRKARVLSMGPEMFAPNAAPTCCHCANGLPGAGGGGGPSRRRQ VLDKAPPQVQGFIGKVKKYF*
Coding	>Hirsu2\|8003 ATGGAGGTTCGGAATCCCTTGCGCCTCCTCCTCCTCACCATCCTCTTCCTCATCACCATCCGGACAGCACAGATC CAGGCAGGCGGCGAGGAAAGACGGCCATCATCCAGCTCGGCATCCACAGGCAGCACCATGTCGAACAAGCCCATC TGCGATTGCGACACGCCGGACCCGTGGATCCTGGCCGCAAACGGCAAGTTCTACTTCACCTTCACGCTCGGCAAC CGTGTCGAGATATGGGCCTCGTCGCAGCTCGAGAACTTCCACGGCTGCCAGAAGGCCGTCGTCTGGCAGCCGGCG CCCGGCTCGCCCTGGTCCGAGGACGTCTGGGCGCCCGAGCTTCACCAGCTCAACGGCAAGTGGTACATCTACACC TGCGCCGCGCCGCCGGGCGTCGGGAACCCCGGCCACCGGACCCTCGTGCTCGAGTCGGACAAGAAGGACCCGATG GACCCGGCCGGGTGGAAGTTCCTGGGCCCGCTCAAGGGCATGCCCGACCACTGGTCCATCGATGCCACCGCCTTC AGCACCGACGGTCACGACCTCTACCTCTGCTGGAGCGGCTGGCCGCCCGGTGACCACAGCGACAAGCAGCAGAAC CTGTTCGTGGCCCGCATGGCCAGCCCTGTCGAGGTCGTCCCGGACACGGCCGTCTGCGTCTGCCACGCGGACCAG CCGTGGGAGCGGCCGGATGACGGCTCGCGCGGCGTCGCCGAGGGGCCGACCTGGGTCAACTTCCCGGGCTTCCGC GGCATCGTCTACTCGGCCTACGGCAGCTGGACCAGCGAGTACAAGCTGGGCTTGCTGGCCCTGGTCGGCAAGGAT CCGCTGCGGCCCGAGTCCTGGTCCAAGAGGCCGGCGCCGCTGCTGGTCAGCGACAAGGACCACGGCGGCCCGTTC GGGCCCGGCCACGCGAGCTTCCTCCCGAGTCCCTACAACGACGGCCGTCTCTTCTGCGTCTACCACGGCACCGCC AACTACGGAGAGGGATGGGGCAACCGGAAGGCCAGAGTCCTGAGCATGGGGCCGGAAATGTTCGCGCCCAATGCC GCGCCCACTTGCTGCCACTGCGCGAATGGCCTGCCCGGGGCCGGAGGAGGAGGAGGACCGTCGCGCCGGCGCCAG GTGCTGGACAAGGCGCCGCCCCAGGTCCAGGGATTTATTGGCAAAGTGAAGAAGTACTTTTGA
Transcript	>Hirsu2\|8003 ATGGAGGTTCGGAATCCCTTGCGCCTCCTCCTCCTCACCATCCTCTTCCTCATCACCATCCGGACAGCACAGATC CAGGCAGGCGGCGAGGAAAGACGGCCATCATCCAGCTCGGCATCCACAGGCAGCACCATGTCGAACAAGCCCATC TGCGATTGCGACACGCCGGACCCGTGGATCCTGGCCGCAAACGGCAAGTTCTACTTCACCTTCACGCTCGGCAAC CGTGTCGAGATATGGGCCTCGTCGCAGCTCGAGAACTTCCACGGCTGCCAGAAGGCCGTCGTCTGGCAGCCGGCG CCCGGCTCGCCCTGGTCCGAGGACGTCTGGGCGCCCGAGCTTCACCAGCTCAACGGCAAGTGGTACATCTACACC TGCGCCGCGCCGCCGGGCGTCGGGAACCCCGGCCACCGGACCCTCGTGCTCGAGTCGGACAAGAAGGACCCGATG GACCCGGCCGGGTGGAAGTTCCTGGGCCCGCTCAAGGGCATGCCCGACCACTGGTCCATCGATGCCACCGCCTTC AGCACCGACGGTCACGACCTCTACCTCTGCTGGAGCGGCTGGCCGCCCGGTGACCACAGCGACAAGCAGCAGAAC CTGTTCGTGGCCCGCATGGCCAGCCCTGTCGAGGTCGTCCCGGACACGGCCGTCTGCGTCTGCCACGCGGACCAG CCGTGGGAGCGGCCGGATGACGGCTCGCGCGGCGTCGCCGAGGGGCCGACCTGGGTCAACTTCCCGGGCTTCCGC GGCATCGTCTACTCGGCCTACGGCAGCTGGACCAGCGAGTACAAGCTGGGCTTGCTGGCCCTGGTCGGCAAGGAT CCGCTGCGGCCCGAGTCCTGGTCCAAGAGGCCGGCGCCGCTGCTGGTCAGCGACAAGGACCACGGCGGCCCGTTC GGGCCCGGCCACGCGAGCTTCCTCCCGAGTCCCTACAACGACGGCCGTCTCTTCTGCGTCTACCACGGCACCGCC AACTACGGAGAGGGATGGGGCAACCGGAAGGCCAGAGTCCTGAGCATGGGGCCGGAAATGTTCGCGCCCAATGCC GCGCCCACTTGCTGCCACTGCGCGAATGGCCTGCCCGGGGCCGGAGGAGGAGGAGGACCGTCGCGCCGGCGCCAG GTGCTGGACAAGGCGCCGCCCCAGGTCCAGGGATTTATTGGCAAAGTGAAGAAGTACTTTTGA
Gene	>Hirsu2\|8003 ATGGAGGTTCGGAATCCCTTGCGCCTCCTCCTCCTCACCATCCTCTTCCTCATCACCATCCGGACAGCACAGATC CAGGCAGGCGGCGAGGAAAGACGGCCATCATCCAGCTCGGCATCCACAGGCAGCACCATGTCGAACAAGCCCATC TGCGATTGCGACACGCCGGACCCGTGGATCCTGGCCGCAAACGGCAAGTTCTACTTCACCTTCACGCTCGGCAAC CGTGTCGAGATATGGGCCTCGTCGCAGCTCGAGAACTTCCACGGCTGCCAGAAGGCCGTCGTCTGGCAGCCGGCG CCCGGCTCGCCCTGGTCCGAGGACGTCTGGGCGCCCGAGCTTCACCAGCTCAACGGCAAGTGGTACATCTACACC TGCGCCGCGCCGCCGGGCGTCGGGAACCCCGGCCACCGGACCCTCGTGCTCGAGTCGGACAAGAAGGACCCGATG GACCCGGCCGGGTGGAAGTTCCTGGGCCCGCTCAAGGGCATGCCCGACCACTGGTCCATCGATGCCACCGCCTTC AGCACCGACGGTCACGACCTCTACCTCTGCTGGAGCGGCTGGCCGCCCGGTGACCACAGCGACAAGCAGCAGAAC CTGTTCGTGGCCCGCATGGCCAGCCCTGTCGAGGTCGTCCCGGACACGGCCGTCTGCGTCTGCCACGCGGACCAG CCGTGGGAGCGGCCGGATGACGGCTCGCGCGGCGTCGCCGAGGGGCCGACCTGGGTCAACTTCCCGGGCTTCCGC GGCATCGTCTACTCGGCCTACGGCAGCTGGACCAGCGAGTACAAGCTGGGCTTGCTGGCCCTGGTCGGCAAGGAT CCGCTGCGGCCCGAGTCCTGGTCCAAGAGGCCGGCGCCGCTGCTGGTCAGCGACAAGGACCACGGCGGCCCGTTC GGGCCCGGCCACGCGAGCTTCCTCCCGAGTCCCTACAACGACGGCCGTCTCTTCTGCGTCTACCACGGCACCGCC AACTACGGAGAGGGATGGGGCAACCGGAAGGCCAGAGTCCTGAGCATGGGGCCGGAAATGTTCGCGCCCAATGCC GCGCCCACTTGCTGCCACTGCGCGAATGGCCTGCCCGGGGCCGGAGGAGGAGGAGGACCGTCGCGCCGGCGCCAG GTGCTGGACAAGGCGCCGCCCCAGGTCCAGGGATTTATTGGCAAAGTGAAGAAGTACTTTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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