Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8003
Gene name
LocationContig_5:22280..23468
Strand-
Gene length (bp)1188
Transcript length (bp)1188
Coding sequence length (bp)1188
Protein length (aa) 396

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04616 Glyco_hydro_43 Glycosyl hydrolases family 43 7.5E-34 48 331

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P82594|IABF_STRCX Extracellular exo-alpha-(1->5)-L-arabinofuranosidase OS=Streptomyces chartreusis PE=1 SV=1 64 333 2.0E-22

GO

GO Term Description Terminal node
GO:0005975 carbohydrate metabolic process Yes
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds Yes
GO:0008152 metabolic process No
GO:0008150 biological_process No
GO:0003674 molecular_function No
GO:0044238 primary metabolic process No
GO:0016798 hydrolase activity, acting on glycosyl bonds No
GO:0071704 organic substance metabolic process No
GO:0003824 catalytic activity No
GO:0016787 hydrolase activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8003
MEVRNPLRLLLLTILFLITIRTAQIQAGGEERRPSSSSASTGSTMSNKPICDCDTPDPWILAANGKFYFTFTLGN
RVEIWASSQLENFHGCQKAVVWQPAPGSPWSEDVWAPELHQLNGKWYIYTCAAPPGVGNPGHRTLVLESDKKDPM
DPAGWKFLGPLKGMPDHWSIDATAFSTDGHDLYLCWSGWPPGDHSDKQQNLFVARMASPVEVVPDTAVCVCHADQ
PWERPDDGSRGVAEGPTWVNFPGFRGIVYSAYGSWTSEYKLGLLALVGKDPLRPESWSKRPAPLLVSDKDHGGPF
GPGHASFLPSPYNDGRLFCVYHGTANYGEGWGNRKARVLSMGPEMFAPNAAPTCCHCANGLPGAGGGGGPSRRRQ
VLDKAPPQVQGFIGKVKKYF*
Coding >Hirsu2|8003
ATGGAGGTTCGGAATCCCTTGCGCCTCCTCCTCCTCACCATCCTCTTCCTCATCACCATCCGGACAGCACAGATC
CAGGCAGGCGGCGAGGAAAGACGGCCATCATCCAGCTCGGCATCCACAGGCAGCACCATGTCGAACAAGCCCATC
TGCGATTGCGACACGCCGGACCCGTGGATCCTGGCCGCAAACGGCAAGTTCTACTTCACCTTCACGCTCGGCAAC
CGTGTCGAGATATGGGCCTCGTCGCAGCTCGAGAACTTCCACGGCTGCCAGAAGGCCGTCGTCTGGCAGCCGGCG
CCCGGCTCGCCCTGGTCCGAGGACGTCTGGGCGCCCGAGCTTCACCAGCTCAACGGCAAGTGGTACATCTACACC
TGCGCCGCGCCGCCGGGCGTCGGGAACCCCGGCCACCGGACCCTCGTGCTCGAGTCGGACAAGAAGGACCCGATG
GACCCGGCCGGGTGGAAGTTCCTGGGCCCGCTCAAGGGCATGCCCGACCACTGGTCCATCGATGCCACCGCCTTC
AGCACCGACGGTCACGACCTCTACCTCTGCTGGAGCGGCTGGCCGCCCGGTGACCACAGCGACAAGCAGCAGAAC
CTGTTCGTGGCCCGCATGGCCAGCCCTGTCGAGGTCGTCCCGGACACGGCCGTCTGCGTCTGCCACGCGGACCAG
CCGTGGGAGCGGCCGGATGACGGCTCGCGCGGCGTCGCCGAGGGGCCGACCTGGGTCAACTTCCCGGGCTTCCGC
GGCATCGTCTACTCGGCCTACGGCAGCTGGACCAGCGAGTACAAGCTGGGCTTGCTGGCCCTGGTCGGCAAGGAT
CCGCTGCGGCCCGAGTCCTGGTCCAAGAGGCCGGCGCCGCTGCTGGTCAGCGACAAGGACCACGGCGGCCCGTTC
GGGCCCGGCCACGCGAGCTTCCTCCCGAGTCCCTACAACGACGGCCGTCTCTTCTGCGTCTACCACGGCACCGCC
AACTACGGAGAGGGATGGGGCAACCGGAAGGCCAGAGTCCTGAGCATGGGGCCGGAAATGTTCGCGCCCAATGCC
GCGCCCACTTGCTGCCACTGCGCGAATGGCCTGCCCGGGGCCGGAGGAGGAGGAGGACCGTCGCGCCGGCGCCAG
GTGCTGGACAAGGCGCCGCCCCAGGTCCAGGGATTTATTGGCAAAGTGAAGAAGTACTTTTGA
Transcript >Hirsu2|8003
ATGGAGGTTCGGAATCCCTTGCGCCTCCTCCTCCTCACCATCCTCTTCCTCATCACCATCCGGACAGCACAGATC
CAGGCAGGCGGCGAGGAAAGACGGCCATCATCCAGCTCGGCATCCACAGGCAGCACCATGTCGAACAAGCCCATC
TGCGATTGCGACACGCCGGACCCGTGGATCCTGGCCGCAAACGGCAAGTTCTACTTCACCTTCACGCTCGGCAAC
CGTGTCGAGATATGGGCCTCGTCGCAGCTCGAGAACTTCCACGGCTGCCAGAAGGCCGTCGTCTGGCAGCCGGCG
CCCGGCTCGCCCTGGTCCGAGGACGTCTGGGCGCCCGAGCTTCACCAGCTCAACGGCAAGTGGTACATCTACACC
TGCGCCGCGCCGCCGGGCGTCGGGAACCCCGGCCACCGGACCCTCGTGCTCGAGTCGGACAAGAAGGACCCGATG
GACCCGGCCGGGTGGAAGTTCCTGGGCCCGCTCAAGGGCATGCCCGACCACTGGTCCATCGATGCCACCGCCTTC
AGCACCGACGGTCACGACCTCTACCTCTGCTGGAGCGGCTGGCCGCCCGGTGACCACAGCGACAAGCAGCAGAAC
CTGTTCGTGGCCCGCATGGCCAGCCCTGTCGAGGTCGTCCCGGACACGGCCGTCTGCGTCTGCCACGCGGACCAG
CCGTGGGAGCGGCCGGATGACGGCTCGCGCGGCGTCGCCGAGGGGCCGACCTGGGTCAACTTCCCGGGCTTCCGC
GGCATCGTCTACTCGGCCTACGGCAGCTGGACCAGCGAGTACAAGCTGGGCTTGCTGGCCCTGGTCGGCAAGGAT
CCGCTGCGGCCCGAGTCCTGGTCCAAGAGGCCGGCGCCGCTGCTGGTCAGCGACAAGGACCACGGCGGCCCGTTC
GGGCCCGGCCACGCGAGCTTCCTCCCGAGTCCCTACAACGACGGCCGTCTCTTCTGCGTCTACCACGGCACCGCC
AACTACGGAGAGGGATGGGGCAACCGGAAGGCCAGAGTCCTGAGCATGGGGCCGGAAATGTTCGCGCCCAATGCC
GCGCCCACTTGCTGCCACTGCGCGAATGGCCTGCCCGGGGCCGGAGGAGGAGGAGGACCGTCGCGCCGGCGCCAG
GTGCTGGACAAGGCGCCGCCCCAGGTCCAGGGATTTATTGGCAAAGTGAAGAAGTACTTTTGA
Gene >Hirsu2|8003
ATGGAGGTTCGGAATCCCTTGCGCCTCCTCCTCCTCACCATCCTCTTCCTCATCACCATCCGGACAGCACAGATC
CAGGCAGGCGGCGAGGAAAGACGGCCATCATCCAGCTCGGCATCCACAGGCAGCACCATGTCGAACAAGCCCATC
TGCGATTGCGACACGCCGGACCCGTGGATCCTGGCCGCAAACGGCAAGTTCTACTTCACCTTCACGCTCGGCAAC
CGTGTCGAGATATGGGCCTCGTCGCAGCTCGAGAACTTCCACGGCTGCCAGAAGGCCGTCGTCTGGCAGCCGGCG
CCCGGCTCGCCCTGGTCCGAGGACGTCTGGGCGCCCGAGCTTCACCAGCTCAACGGCAAGTGGTACATCTACACC
TGCGCCGCGCCGCCGGGCGTCGGGAACCCCGGCCACCGGACCCTCGTGCTCGAGTCGGACAAGAAGGACCCGATG
GACCCGGCCGGGTGGAAGTTCCTGGGCCCGCTCAAGGGCATGCCCGACCACTGGTCCATCGATGCCACCGCCTTC
AGCACCGACGGTCACGACCTCTACCTCTGCTGGAGCGGCTGGCCGCCCGGTGACCACAGCGACAAGCAGCAGAAC
CTGTTCGTGGCCCGCATGGCCAGCCCTGTCGAGGTCGTCCCGGACACGGCCGTCTGCGTCTGCCACGCGGACCAG
CCGTGGGAGCGGCCGGATGACGGCTCGCGCGGCGTCGCCGAGGGGCCGACCTGGGTCAACTTCCCGGGCTTCCGC
GGCATCGTCTACTCGGCCTACGGCAGCTGGACCAGCGAGTACAAGCTGGGCTTGCTGGCCCTGGTCGGCAAGGAT
CCGCTGCGGCCCGAGTCCTGGTCCAAGAGGCCGGCGCCGCTGCTGGTCAGCGACAAGGACCACGGCGGCCCGTTC
GGGCCCGGCCACGCGAGCTTCCTCCCGAGTCCCTACAACGACGGCCGTCTCTTCTGCGTCTACCACGGCACCGCC
AACTACGGAGAGGGATGGGGCAACCGGAAGGCCAGAGTCCTGAGCATGGGGCCGGAAATGTTCGCGCCCAATGCC
GCGCCCACTTGCTGCCACTGCGCGAATGGCCTGCCCGGGGCCGGAGGAGGAGGAGGACCGTCGCGCCGGCGCCAG
GTGCTGGACAAGGCGCCGCCCCAGGTCCAGGGATTTATTGGCAAAGTGAAGAAGTACTTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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