Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8003
Gene name
LocationContig_5:22280..23468
Strand-
Gene length (bp)1188
Transcript length (bp)1188
Coding sequence length (bp)1188
Protein length (aa) 396

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04616 Glyco_hydro_43 Glycosyl hydrolases family 43 8.2E-34 48 331

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P82594|IABF_STRCX Extracellular exo-alpha-(1->5)-L-arabinofuranosidase OS=Streptomyces chartreusis PE=1 SV=1 64 333 2.0E-22

GO

GO Term Description Terminal node
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds Yes
GO:0005975 carbohydrate metabolic process Yes
GO:0016798 hydrolase activity, acting on glycosyl bonds No
GO:0071704 organic substance metabolic process No
GO:0008152 metabolic process No
GO:0003824 catalytic activity No
GO:0044238 primary metabolic process No
GO:0008150 biological_process No
GO:0016787 hydrolase activity No
GO:0003674 molecular_function No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.2599 0.1236 0.7513 0.2212 0.0899 0.0818 0.4277 0.4336 0.3197 0.0202

SignalP

SignalP signal predicted Location Score
Yes 1 - 27 0.99977

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

CAZyme category E-value Start End
GH43_26 5.7E-79 49 338

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6268
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-floridani Ophcf2|01116
Ophiocordyceps camponoti-rufipedis Ophun1|7191
Ophiocordyceps kimflemingae Ophio5|3622
Ophiocordyceps subramaniannii Hirsu2|8003 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8003
MEVRNPLRLLLLTILFLITIRTAQIQAGGEERRPSSSSASTGSTMSNKPICDCDTPDPWILAANGKFYFTFTLGN
RVEIWASSQLENFHGCQKAVVWQPAPGSPWSEDVWAPELHQLNGKWYIYTCAAPPGVGNPGHRTLVLESDKKDPM
DPAGWKFLGPLKGMPDHWSIDATAFSTDGHDLYLCWSGWPPGDHSDKQQNLFVARMASPVEVVPDTAVCVCHADQ
PWERPDDGSRGVAEGPTWVNFPGFRGIVYSAYGSWTSEYKLGLLALVGKDPLRPESWSKRPAPLLVSDKDHGGPF
GPGHASFLPSPYNDGRLFCVYHGTANYGEGWGNRKARVLSMGPEMFAPNAAPTCCHCANGLPGAGGGGGPSRRRQ
VLDKAPPQVQGFIGKVKKYF*
Coding >Hirsu2|8003
ATGGAGGTTCGGAATCCCTTGCGCCTCCTCCTCCTCACCATCCTCTTCCTCATCACCATCCGGACAGCACAGATC
CAGGCAGGCGGCGAGGAAAGACGGCCATCATCCAGCTCGGCATCCACAGGCAGCACCATGTCGAACAAGCCCATC
TGCGATTGCGACACGCCGGACCCGTGGATCCTGGCCGCAAACGGCAAGTTCTACTTCACCTTCACGCTCGGCAAC
CGTGTCGAGATATGGGCCTCGTCGCAGCTCGAGAACTTCCACGGCTGCCAGAAGGCCGTCGTCTGGCAGCCGGCG
CCCGGCTCGCCCTGGTCCGAGGACGTCTGGGCGCCCGAGCTTCACCAGCTCAACGGCAAGTGGTACATCTACACC
TGCGCCGCGCCGCCGGGCGTCGGGAACCCCGGCCACCGGACCCTCGTGCTCGAGTCGGACAAGAAGGACCCGATG
GACCCGGCCGGGTGGAAGTTCCTGGGCCCGCTCAAGGGCATGCCCGACCACTGGTCCATCGATGCCACCGCCTTC
AGCACCGACGGTCACGACCTCTACCTCTGCTGGAGCGGCTGGCCGCCCGGTGACCACAGCGACAAGCAGCAGAAC
CTGTTCGTGGCCCGCATGGCCAGCCCTGTCGAGGTCGTCCCGGACACGGCCGTCTGCGTCTGCCACGCGGACCAG
CCGTGGGAGCGGCCGGATGACGGCTCGCGCGGCGTCGCCGAGGGGCCGACCTGGGTCAACTTCCCGGGCTTCCGC
GGCATCGTCTACTCGGCCTACGGCAGCTGGACCAGCGAGTACAAGCTGGGCTTGCTGGCCCTGGTCGGCAAGGAT
CCGCTGCGGCCCGAGTCCTGGTCCAAGAGGCCGGCGCCGCTGCTGGTCAGCGACAAGGACCACGGCGGCCCGTTC
GGGCCCGGCCACGCGAGCTTCCTCCCGAGTCCCTACAACGACGGCCGTCTCTTCTGCGTCTACCACGGCACCGCC
AACTACGGAGAGGGATGGGGCAACCGGAAGGCCAGAGTCCTGAGCATGGGGCCGGAAATGTTCGCGCCCAATGCC
GCGCCCACTTGCTGCCACTGCGCGAATGGCCTGCCCGGGGCCGGAGGAGGAGGAGGACCGTCGCGCCGGCGCCAG
GTGCTGGACAAGGCGCCGCCCCAGGTCCAGGGATTTATTGGCAAAGTGAAGAAGTACTTTTGA
Transcript >Hirsu2|8003
ATGGAGGTTCGGAATCCCTTGCGCCTCCTCCTCCTCACCATCCTCTTCCTCATCACCATCCGGACAGCACAGATC
CAGGCAGGCGGCGAGGAAAGACGGCCATCATCCAGCTCGGCATCCACAGGCAGCACCATGTCGAACAAGCCCATC
TGCGATTGCGACACGCCGGACCCGTGGATCCTGGCCGCAAACGGCAAGTTCTACTTCACCTTCACGCTCGGCAAC
CGTGTCGAGATATGGGCCTCGTCGCAGCTCGAGAACTTCCACGGCTGCCAGAAGGCCGTCGTCTGGCAGCCGGCG
CCCGGCTCGCCCTGGTCCGAGGACGTCTGGGCGCCCGAGCTTCACCAGCTCAACGGCAAGTGGTACATCTACACC
TGCGCCGCGCCGCCGGGCGTCGGGAACCCCGGCCACCGGACCCTCGTGCTCGAGTCGGACAAGAAGGACCCGATG
GACCCGGCCGGGTGGAAGTTCCTGGGCCCGCTCAAGGGCATGCCCGACCACTGGTCCATCGATGCCACCGCCTTC
AGCACCGACGGTCACGACCTCTACCTCTGCTGGAGCGGCTGGCCGCCCGGTGACCACAGCGACAAGCAGCAGAAC
CTGTTCGTGGCCCGCATGGCCAGCCCTGTCGAGGTCGTCCCGGACACGGCCGTCTGCGTCTGCCACGCGGACCAG
CCGTGGGAGCGGCCGGATGACGGCTCGCGCGGCGTCGCCGAGGGGCCGACCTGGGTCAACTTCCCGGGCTTCCGC
GGCATCGTCTACTCGGCCTACGGCAGCTGGACCAGCGAGTACAAGCTGGGCTTGCTGGCCCTGGTCGGCAAGGAT
CCGCTGCGGCCCGAGTCCTGGTCCAAGAGGCCGGCGCCGCTGCTGGTCAGCGACAAGGACCACGGCGGCCCGTTC
GGGCCCGGCCACGCGAGCTTCCTCCCGAGTCCCTACAACGACGGCCGTCTCTTCTGCGTCTACCACGGCACCGCC
AACTACGGAGAGGGATGGGGCAACCGGAAGGCCAGAGTCCTGAGCATGGGGCCGGAAATGTTCGCGCCCAATGCC
GCGCCCACTTGCTGCCACTGCGCGAATGGCCTGCCCGGGGCCGGAGGAGGAGGAGGACCGTCGCGCCGGCGCCAG
GTGCTGGACAAGGCGCCGCCCCAGGTCCAGGGATTTATTGGCAAAGTGAAGAAGTACTTTTGA
Gene >Hirsu2|8003
ATGGAGGTTCGGAATCCCTTGCGCCTCCTCCTCCTCACCATCCTCTTCCTCATCACCATCCGGACAGCACAGATC
CAGGCAGGCGGCGAGGAAAGACGGCCATCATCCAGCTCGGCATCCACAGGCAGCACCATGTCGAACAAGCCCATC
TGCGATTGCGACACGCCGGACCCGTGGATCCTGGCCGCAAACGGCAAGTTCTACTTCACCTTCACGCTCGGCAAC
CGTGTCGAGATATGGGCCTCGTCGCAGCTCGAGAACTTCCACGGCTGCCAGAAGGCCGTCGTCTGGCAGCCGGCG
CCCGGCTCGCCCTGGTCCGAGGACGTCTGGGCGCCCGAGCTTCACCAGCTCAACGGCAAGTGGTACATCTACACC
TGCGCCGCGCCGCCGGGCGTCGGGAACCCCGGCCACCGGACCCTCGTGCTCGAGTCGGACAAGAAGGACCCGATG
GACCCGGCCGGGTGGAAGTTCCTGGGCCCGCTCAAGGGCATGCCCGACCACTGGTCCATCGATGCCACCGCCTTC
AGCACCGACGGTCACGACCTCTACCTCTGCTGGAGCGGCTGGCCGCCCGGTGACCACAGCGACAAGCAGCAGAAC
CTGTTCGTGGCCCGCATGGCCAGCCCTGTCGAGGTCGTCCCGGACACGGCCGTCTGCGTCTGCCACGCGGACCAG
CCGTGGGAGCGGCCGGATGACGGCTCGCGCGGCGTCGCCGAGGGGCCGACCTGGGTCAACTTCCCGGGCTTCCGC
GGCATCGTCTACTCGGCCTACGGCAGCTGGACCAGCGAGTACAAGCTGGGCTTGCTGGCCCTGGTCGGCAAGGAT
CCGCTGCGGCCCGAGTCCTGGTCCAAGAGGCCGGCGCCGCTGCTGGTCAGCGACAAGGACCACGGCGGCCCGTTC
GGGCCCGGCCACGCGAGCTTCCTCCCGAGTCCCTACAACGACGGCCGTCTCTTCTGCGTCTACCACGGCACCGCC
AACTACGGAGAGGGATGGGGCAACCGGAAGGCCAGAGTCCTGAGCATGGGGCCGGAAATGTTCGCGCCCAATGCC
GCGCCCACTTGCTGCCACTGCGCGAATGGCCTGCCCGGGGCCGGAGGAGGAGGAGGACCGTCGCGCCGGCGCCAG
GTGCTGGACAAGGCGCCGCCCCAGGTCCAGGGATTTATTGGCAAAGTGAAGAAGTACTTTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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