Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8001
Gene name
LocationContig_5:18696..19343
Strand+
Gene length (bp)647
Transcript length (bp)564
Coding sequence length (bp)564
Protein length (aa) 188

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1285 0.0628 0.9513 0.0741 0.0852 0.0202 0.183 0.2159 0.1183 0.0037

SignalP

SignalP signal predicted Location Score
Yes 1 - 21 0.999716

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup569
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2676
Ophiocordyceps australis 1348a (Ghana) OphauG2|6197
Ophiocordyceps australis map64 (Brazil) OphauB2|4006
Ophiocordyceps camponoti-floridani Ophcf2|03295
Ophiocordyceps camponoti-rufipedis Ophun1|7314
Ophiocordyceps kimflemingae Ophio5|3542
Ophiocordyceps subramaniannii Hirsu2|5316
Ophiocordyceps subramaniannii Hirsu2|8001 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8001
MHLSAQFLVGSLLFLANKALSETPWIPCNRPETTDRLCYSASIGAVPQNLDVADVRAVAQNLREYGRSVTRFWTM
NSNDAANCAEWTAFCSGSVMVFARLNGRQRASVSYEDIARTIDGTDDGVNSTEESNIGLLKCGSDGGQMPVLVNQ
TSELYQRDDYKKLGLTNEGIIIKLVKSNKEMDACQYN*
Coding >Hirsu2|8001
ATGCATCTCTCGGCCCAGTTCCTCGTTGGCAGCTTGCTCTTCCTTGCCAACAAGGCCCTCTCCGAAACACCCTGG
ATTCCCTGCAACAGGCCAGAGACAACGGACCGTCTCTGCTATTCCGCATCAATCGGTGCCGTGCCGCAGAACCTG
GACGTTGCGGACGTGCGCGCAGTCGCCCAGAACCTTCGCGAGTACGGGCGCAGTGTGACACGCTTCTGGACGATG
AACTCCAATGATGCCGCCAACTGCGCTGAGTGGACCGCCTTCTGCTCCGGCAGTGTCATGGTGTTTGCCAGGCTG
AACGGCCGCCAGCGCGCGTCGGTCTCTTATGAAGATATCGCCCGGACCATTGACGGAACAGACGACGGAGTAAAC
AGCACCGAGGAATCCAACATTGGGCTTCTCAAGTGCGGGAGCGATGGTGGTCAAATGCCTGTTCTCGTCAACCAG
ACTTCCGAACTGTACCAAAGAGATGATTACAAGAAGTTGGGGCTCACGAATGAAGGCATTATTATCAAGCTCGTC
AAGTCGAACAAAGAGATGGACGCTTGTCAGTACAATTAA
Transcript >Hirsu2|8001
ATGCATCTCTCGGCCCAGTTCCTCGTTGGCAGCTTGCTCTTCCTTGCCAACAAGGCCCTCTCCGAAACACCCTGG
ATTCCCTGCAACAGGCCAGAGACAACGGACCGTCTCTGCTATTCCGCATCAATCGGTGCCGTGCCGCAGAACCTG
GACGTTGCGGACGTGCGCGCAGTCGCCCAGAACCTTCGCGAGTACGGGCGCAGTGTGACACGCTTCTGGACGATG
AACTCCAATGATGCCGCCAACTGCGCTGAGTGGACCGCCTTCTGCTCCGGCAGTGTCATGGTGTTTGCCAGGCTG
AACGGCCGCCAGCGCGCGTCGGTCTCTTATGAAGATATCGCCCGGACCATTGACGGAACAGACGACGGAGTAAAC
AGCACCGAGGAATCCAACATTGGGCTTCTCAAGTGCGGGAGCGATGGTGGTCAAATGCCTGTTCTCGTCAACCAG
ACTTCCGAACTGTACCAAAGAGATGATTACAAGAAGTTGGGGCTCACGAATGAAGGCATTATTATCAAGCTCGTC
AAGTCGAACAAAGAGATGGACGCTTGTCAGTACAATTAA
Gene >Hirsu2|8001
ATGCATCTCTCGGCCCAGTTCCTCGTTGGCAGCTTGCTCTTCCTTGCCAACAAGGCCCTCTCCGAAACACCCTGG
ATTCCCTGCAACAGGCCAGAGACAACGGACCGTCTCTGCTATTCCGCATCAATCGGTGCCGTGCCGCAGAACCTG
GACGTTGCGGACGTGCGCGCAGTCGCCCAGAACCTTCGCGAGTACGGGCGCAGTGTGACACGCTTCTGGACGATG
AACTCCAATGATGCCGCCAACTGCGCTGAGTGGACCGCCTTCTGCTCCGGCAGTGTCATGGTGTTTGCCAGGCTG
AACGGCCGCCAGCGCGCGTCGGTCTCTTATGAAGATATCGCCCGGACCATTGACGGAACAGACGACGGAGTAAAC
AGCACCGAGGAATCCAACATTGGGCTTCTCAAGTGCGGGAGCGATGGTGGTATGACCTGCCTTTTCTTCGTCTCC
TCTCAGCACGTCAACCCGCTCTGTGTGGGCACCGTATCAAGCTTACTCCTTTTGCAGGTCAAATGCCTGTTCTCG
TCAACCAGACTTCCGAACTGTACCAAAGAGATGATTACAAGAAGTTGGGGCTCACGAATGAAGGCATTATTATCA
AGCTCGTCAAGTCGAACAAAGAGATGGACGCTTGTCAGTACAATTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail