Protein ID | Hirsu2|8000 |
Gene name | |
Location | Contig_5:2456..5117 |
Strand | + |
Gene length (bp) | 2661 |
Transcript length (bp) | 2337 |
Coding sequence length (bp) | 2337 |
Protein length (aa) | 779 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 30 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 682 | 704 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|8000 MPDISVSYAAGFIAVAIFVARQVSPNALAYICSKRLGFSNSAATWCGANDGQQCDKLGLTSRSRTASSRVLEQSL WPYLLRTDDAYDKAVRPSVLWISRLIPAMGILLSVASVVTPLGLYSEWALGSPVEASFVYVPDPSLFGLRGTMIR PEKTSARDCDQHVLSGGSGHAQGWIDVQPLCPGKTPYLRQSHFELFSSGSDDHATISSIFDIGWRQYIVREPRAN SSDKQSIIGIYRHIDNLILRDGIQLVEGLIVDMSRGMVGFRNHSVPAGFDGPVTWQEDILFVEPETVCVDTNFTW SLDYSDSQTVKASLFRGGDVAEFNLTKMPEPLQSLEDRSPNLRARALAAAGRLNLMITGAYVGQWERGFTNWTIG PDVDSLGFASPSMNDMELTSRFWPDVIFSVGQTDESRIEDGSKINGACRTIDPNARPPKQNTALIQCGVLIGLPL PSGGVNYSGPMWAGEEKMVRGIYSCASATKASIKTVSLWANGTTSLESVKATEIRDKIYPDEESMPLWGAEEYNS DEEPDHYINLLWGLVTPEPRNRGDINLTTYRQPSFYLPGHMVKSSNQTELVFMGDNDNLAGANFASNMLRATYHT GEANPYWFYSQTGSHYLLSESTVARFQELSRTAETASLIPNLIFTDLTASAIVGSKGAGKANRKATVRPLTMALR YKTPFALPAIAAGIILLAMLSISLVVSLVGPGGLAGVRSHIQILAPGRIYTTLLPSAVQNRSDLVLCGKDWSQRF GAAVIDLSEARPVFKSMIAGEYNGEEEV* |
Coding | >Hirsu2|8000 ATGCCCGATATCTCCGTCTCTTACGCCGCTGGCTTCATTGCCGTGGCAATATTTGTCGCTCGTCAAGTGTCGCCA AATGCTCTCGCCTACATCTGCTCGAAACGGCTGGGATTCTCAAACTCTGCAGCTACGTGGTGCGGTGCGAACGAT GGCCAGCAGTGCGACAAGTTAGGTCTGACCAGCCGTTCCAGGACGGCGAGCTCTCGAGTACTGGAGCAGTCACTC TGGCCATATCTCCTCCGCACCGACGACGCCTACGATAAGGCGGTCCGCCCGAGCGTATTATGGATTTCCCGCCTC ATTCCGGCCATGGGAATCCTGCTCTCGGTAGCCTCTGTTGTCACACCGCTAGGACTCTATAGCGAATGGGCATTG GGTAGTCCTGTAGAGGCAAGTTTTGTCTACGTGCCCGATCCTTCTCTCTTTGGTCTTCGTGGAACCATGATCCGG CCCGAAAAAACTTCTGCCCGTGATTGTGATCAACATGTCCTGAGTGGAGGATCTGGTCATGCGCAGGGCTGGATA GACGTTCAGCCACTGTGCCCCGGCAAGACCCCTTATCTTCGCCAGAGTCATTTTGAGTTGTTCTCCAGCGGCAGC GACGACCATGCAACGATTTCCAGTATCTTTGACATAGGATGGAGACAGTACATAGTTCGAGAGCCAAGAGCCAAT TCGAGCGACAAACAGAGCATAATCGGGATTTACCGACATATTGATAACTTGATATTAAGAGATGGAATCCAGCTT GTTGAGGGGCTCATTGTGGATATGAGCCGGGGTATGGTCGGTTTTCGGAATCATTCGGTGCCCGCAGGCTTCGAC GGTCCCGTCACATGGCAGGAAGATATCCTTTTCGTCGAGCCCGAAACCGTTTGCGTGGACACAAATTTTACCTGG AGCCTCGATTATTCAGATTCCCAGACGGTCAAGGCCTCCCTCTTCCGTGGTGGCGACGTCGCCGAGTTCAATTTG ACGAAGATGCCTGAGCCATTGCAAAGCCTCGAGGATCGAAGTCCAAACCTCCGGGCGCGGGCTCTTGCGGCGGCT GGAAGGCTCAACCTCATGATAACGGGCGCTTACGTTGGCCAGTGGGAGCGAGGCTTTACAAATTGGACCATCGGC CCAGACGTCGACTCTCTGGGTTTCGCCTCGCCATCAATGAATGACATGGAGCTCACCTCCCGTTTTTGGCCGGAT GTCATATTCAGCGTTGGACAGACAGACGAGTCAAGGATTGAAGACGGCTCAAAAATAAACGGTGCATGCCGTACC ATAGATCCCAACGCTCGACCACCGAAGCAAAATACTGCTCTTATTCAGTGTGGAGTGCTCATAGGTCTGCCTCTG CCGTCAGGCGGCGTGAATTATTCCGGCCCAATGTGGGCAGGAGAGGAAAAAATGGTCCGTGGGATCTACTCCTGC GCTTCTGCCACCAAAGCATCCATCAAGACCGTCTCGCTATGGGCTAATGGAACTACCAGTCTAGAATCGGTCAAA GCGACGGAAATTAGGGATAAGATATACCCTGACGAAGAGAGCATGCCATTGTGGGGAGCAGAGGAGTACAATTCA GATGAGGAACCAGACCACTACATCAACCTACTCTGGGGTCTCGTGACACCGGAACCCAGAAACAGAGGCGACATC AATCTAACAACATACCGCCAACCATCTTTTTACCTTCCAGGCCATATGGTAAAATCCTCCAACCAAACTGAACTA GTATTCATGGGGGACAACGACAATCTGGCAGGAGCCAACTTTGCCTCAAATATGCTGCGTGCTACTTATCACACC GGAGAGGCAAACCCGTACTGGTTTTACAGTCAAACTGGGTCCCACTATCTACTGTCAGAAAGTACAGTAGCAAGG TTTCAGGAACTTAGTCGAACCGCAGAAACTGCCTCTCTTATTCCCAACCTCATCTTCACGGATCTAACGGCCTCT GCTATCGTGGGCAGCAAAGGCGCCGGCAAAGCTAACCGGAAGGCCACCGTCAGGCCGCTTACAATGGCGCTCAGA TATAAGACCCCCTTCGCTTTACCGGCTATAGCAGCGGGGATCATCTTGCTTGCTATGTTGTCTATATCGCTCGTC GTCAGCTTGGTTGGACCGGGCGGCCTGGCCGGCGTCCGAAGCCACATTCAGATTCTCGCGCCAGGACGAATCTAC ACGACGCTTCTGCCATCGGCTGTCCAGAATAGAAGCGACTTGGTCCTCTGTGGCAAGGACTGGAGCCAAAGGTTC GGCGCTGCGGTCATTGACCTCTCTGAGGCGCGCCCAGTCTTCAAGAGCATGATTGCAGGGGAATATAACGGAGAG GAGGAGGTGTGA |
Transcript | >Hirsu2|8000 ATGCCCGATATCTCCGTCTCTTACGCCGCTGGCTTCATTGCCGTGGCAATATTTGTCGCTCGTCAAGTGTCGCCA AATGCTCTCGCCTACATCTGCTCGAAACGGCTGGGATTCTCAAACTCTGCAGCTACGTGGTGCGGTGCGAACGAT GGCCAGCAGTGCGACAAGTTAGGTCTGACCAGCCGTTCCAGGACGGCGAGCTCTCGAGTACTGGAGCAGTCACTC TGGCCATATCTCCTCCGCACCGACGACGCCTACGATAAGGCGGTCCGCCCGAGCGTATTATGGATTTCCCGCCTC ATTCCGGCCATGGGAATCCTGCTCTCGGTAGCCTCTGTTGTCACACCGCTAGGACTCTATAGCGAATGGGCATTG GGTAGTCCTGTAGAGGCAAGTTTTGTCTACGTGCCCGATCCTTCTCTCTTTGGTCTTCGTGGAACCATGATCCGG CCCGAAAAAACTTCTGCCCGTGATTGTGATCAACATGTCCTGAGTGGAGGATCTGGTCATGCGCAGGGCTGGATA GACGTTCAGCCACTGTGCCCCGGCAAGACCCCTTATCTTCGCCAGAGTCATTTTGAGTTGTTCTCCAGCGGCAGC GACGACCATGCAACGATTTCCAGTATCTTTGACATAGGATGGAGACAGTACATAGTTCGAGAGCCAAGAGCCAAT TCGAGCGACAAACAGAGCATAATCGGGATTTACCGACATATTGATAACTTGATATTAAGAGATGGAATCCAGCTT GTTGAGGGGCTCATTGTGGATATGAGCCGGGGTATGGTCGGTTTTCGGAATCATTCGGTGCCCGCAGGCTTCGAC GGTCCCGTCACATGGCAGGAAGATATCCTTTTCGTCGAGCCCGAAACCGTTTGCGTGGACACAAATTTTACCTGG AGCCTCGATTATTCAGATTCCCAGACGGTCAAGGCCTCCCTCTTCCGTGGTGGCGACGTCGCCGAGTTCAATTTG ACGAAGATGCCTGAGCCATTGCAAAGCCTCGAGGATCGAAGTCCAAACCTCCGGGCGCGGGCTCTTGCGGCGGCT GGAAGGCTCAACCTCATGATAACGGGCGCTTACGTTGGCCAGTGGGAGCGAGGCTTTACAAATTGGACCATCGGC CCAGACGTCGACTCTCTGGGTTTCGCCTCGCCATCAATGAATGACATGGAGCTCACCTCCCGTTTTTGGCCGGAT GTCATATTCAGCGTTGGACAGACAGACGAGTCAAGGATTGAAGACGGCTCAAAAATAAACGGTGCATGCCGTACC ATAGATCCCAACGCTCGACCACCGAAGCAAAATACTGCTCTTATTCAGTGTGGAGTGCTCATAGGTCTGCCTCTG CCGTCAGGCGGCGTGAATTATTCCGGCCCAATGTGGGCAGGAGAGGAAAAAATGGTCCGTGGGATCTACTCCTGC GCTTCTGCCACCAAAGCATCCATCAAGACCGTCTCGCTATGGGCTAATGGAACTACCAGTCTAGAATCGGTCAAA GCGACGGAAATTAGGGATAAGATATACCCTGACGAAGAGAGCATGCCATTGTGGGGAGCAGAGGAGTACAATTCA GATGAGGAACCAGACCACTACATCAACCTACTCTGGGGTCTCGTGACACCGGAACCCAGAAACAGAGGCGACATC AATCTAACAACATACCGCCAACCATCTTTTTACCTTCCAGGCCATATGGTAAAATCCTCCAACCAAACTGAACTA GTATTCATGGGGGACAACGACAATCTGGCAGGAGCCAACTTTGCCTCAAATATGCTGCGTGCTACTTATCACACC GGAGAGGCAAACCCGTACTGGTTTTACAGTCAAACTGGGTCCCACTATCTACTGTCAGAAAGTACAGTAGCAAGG TTTCAGGAACTTAGTCGAACCGCAGAAACTGCCTCTCTTATTCCCAACCTCATCTTCACGGATCTAACGGCCTCT GCTATCGTGGGCAGCAAAGGCGCCGGCAAAGCTAACCGGAAGGCCACCGTCAGGCCGCTTACAATGGCGCTCAGA TATAAGACCCCCTTCGCTTTACCGGCTATAGCAGCGGGGATCATCTTGCTTGCTATGTTGTCTATATCGCTCGTC GTCAGCTTGGTTGGACCGGGCGGCCTGGCCGGCGTCCGAAGCCACATTCAGATTCTCGCGCCAGGACGAATCTAC ACGACGCTTCTGCCATCGGCTGTCCAGAATAGAAGCGACTTGGTCCTCTGTGGCAAGGACTGGAGCCAAAGGTTC GGCGCTGCGGTCATTGACCTCTCTGAGGCGCGCCCAGTCTTCAAGAGCATGATTGCAGGGGAATATAACGGAGAG GAGGAGGTGTGA |
Gene | >Hirsu2|8000 ATGCCCGATATCTCCGTCTCTTACGCCGCTGGCTTCATTGCCGTGGCAATATTTGTCGGTGAGCAAGGTCTTTTA TTGCGCGCGCTTTGGCCCGACAACTGACAGCAACGTACATGATACATGTAGCTCGTCAAGTGTCGCCAAATGCTC TCGCCTACATCTGCTCGAAACGGCTGGGATTCTCAAACTCTGCAGCTACGTGGTGCGGTGCGAACGATGGCCAGC AGTGCGACAAGTTAGGTCTGACCAGCCGTTCCAGGACGGCGAGCTCTCGAGTACTGGAGCAGTCACTCTGGCCAT ATCTCCTCCGCACCGACGACGCCTACGATAAGGCGGTCCGCCCGAGCGTATTATGGATTTCCCGCCTCATTCCGG CCATGGGAATCCTGCTCTCGGTAGCCTCTGTTGTCACACCGCTAGGACTCTATAGCGAATGGGCATTGGGTAGTC CTGTAGAGGCAAGTTTTGGTATGTGAGACCGCGAGCGGGCCCAGTCTGACGCCCAAGGCTCAGTGATTCTCTGGG CGGCGAGAACTGACTTTCATGTCTTCTGTCTCCTCCAGTCTACGTGCCCGATCCTTCTCTCTTTGGTCTTCGTGG AACCATGATCCGGCCCGAAAAAACTTCTGCCCGTGATTGTGATCAACATGTCCTGAGTGGAGGATCTGGTCATGC GCAGGGCTGGATAGACGTTCAGCCACTGTGCCCCGGCAAGACCCCTTATCTTCGCCAGAGTCATTTTGAGTTGTT CTCCAGCGGCAGCGACGACCATGCAACGATTTCCAGTATCTTTGACATAGGATGGAGACAGTACATAGTTCGAGA GCCAAGAGCCAATTCGAGCGACAAACAGAGCATAATCGGGATTTACCGACATATTGATAACTTGATATTAAGAGA TGGAATCCAGCTTGTTGAGGGGCTCATTGTGGATATGAGCCGGGGTATGGTCGGTTTTCGGAATCATTCGGTGCC CGCAGGCTTCGACGGTCCCGTCACATGGCAGGAAGATATCCTTTTCGTCGAGCCCGAAACCGTTTGCGTGGACAC AAATTTTACCTGGAGCCTCGATTATTCAGATTCCCAGACGGTCAAGGCCTCCCTCTTCCGTGGTGGCGACGTCGC CGAGTTCAATTTGACGAAGATGCCTGAGCCATTGCAAAGCCTCGAGGATCGAAGTCCAAACCTCCGGGCGCGGGC TCTTGCGGCGGCTGGAAGGCTCAACCTCATGATAACGGGCGCTTACGTTGGCCAGTGGGAGCGAGGCTTTACAAA TTGGACCATCGGCCCAGACGTCGACTCTCTGGGTTTCGCCTCGCCATCAATGAATGACATGGAGCTCACCTCCCG TTTTTGGCCGGATGTCATATTCAGCGTTGGACAGACAGACGAGTCAAGGATTGAAGACGGCTCAAAAATAAGTAT GTGTCGCAATTCCATGTCCCTCGAAATCTCGACTTCAACCTGATATGTCACCTATACACGTACCATTCCAGCCCG ATATCTCAACCCTTCAATTGGAACCATGACAAGCTATGTGTATGCCAGTCGTGTTGCTGACGTTACCTGTAACCT GTATCAGACGGTGCATGCCGTACCATAGATCCCAACGCTCGACCACCGAAGCAAAATACTGCTCTTATTCAGTGT GGAGTGCTCATAGGTCTGCCTCTGCCGTCAGGCGGCGTGAATTATTCCGGCCCAATGTGGGCAGGAGAGGAAAAA ATGGTCCGTGGGATCTACTCCTGCGCTTCTGCCACCAAAGCATCCATCAAGACCGTCTCGCTATGGGCTAATGGA ACTACCAGTCTAGAATCGGTCAAAGCGACGGAAATTAGGGATAAGATATACCCTGACGAAGAGAGCATGCCATTG TGGGGAGCAGAGGAGTACAATTCAGATGAGGAACCAGACCACTACATCAACCTACTCTGGGGTCTCGTGACACCG GAACCCAGAAACAGAGGCGACATCAATCTAACAACATACCGCCAACCATCTTTTTACCTTCCAGGCCATATGGTA AAATCCTCCAACCAAACTGAACTAGTATTCATGGGGGACAACGACAATCTGGCAGGAGCCAACTTTGCCTCAAAT ATGCTGCGTGCTACTTATCACACCGGAGAGGCAAACCCGTACTGGTTTTACAGTCAAACTGGGTCCCACTATCTA CTGTCAGAAAGTACAGTAGCAAGGTTTCAGGAACTTAGTCGAACCGCAGAAACTGCCTCTCTTATTCCCAACCTC ATCTTCACGGATCTAACGGCCTCTGCTATCGTGGGCAGCAAAGGCGCCGGCAAAGCTAACCGGAAGGCCACCGTC AGGCCGCTTACAATGGCGCTCAGATATAAGACCCCCTTCGCTTTACCGGCTATAGCAGCGGGGATCATCTTGCTT GCTATGTTGTCTATATCGCTCGTCGTCAGCTTGGTTGGACCGGGCGGCCTGGCCGGCGTCCGAAGCCACATTCAG ATTCTCGCGCCAGGACGAATCTACACGACGCTTCTGCCATCGGCTGTCCAGAATAGAAGCGACTTGGTCCTCTGT GGCAAGGACTGGAGCCAAAGGTTCGGCGCTGCGGTCATTGACCTCTCTGAGGCGCGCCCAGTCTTCAAGAGCATG ATTGCAGGGGAATATAACGGAGAGGAGGAGGTGTGA |