© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|7989 |
| Gene name | |
| Location | Contig_497:15731..16821 |
| Strand | - |
| Gene length (bp) | 1090 |
| Transcript length (bp) | 1017 |
| Coding sequence length (bp) | 1017 |
| Protein length (aa) | 339 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05368 | NmrA | NmrA-like family | 1.5E-12 | 20 | 124 |
| PF13460 | NAD_binding_10 | NAD(P)H-binding | 2.5E-11 | 24 | 110 |
| PF01118 | Semialdhyde_dh | Semialdehyde dehydrogenase, NAD binding domain | 9.8E-06 | 19 | 112 |
| PF01370 | Epimerase | NAD dependent epimerase/dehydratase family | 5.8E-06 | 21 | 86 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0051287 | NAD binding | Yes |
| GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | Yes |
| GO:0036094 | small molecule binding | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0005488 | binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 48 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|7989 MQTKYAKDQPAGFTNRIERVAIVGASGQVGSHMVAALLSTGKHTVTAITRHGGGNTMPEGVKVATVDYDNEDTLV EALRGQQFLAISLSVRAAPDTQSKIIRAAAKAGVPWVMPNCYGTDVRNASLAAENLTGPGVLGGIEAIEKEGVSS WVAMCCSFWYEFSLAMGPGWYGFDFEKRQVTFNDDGKTRINTSTWEQCGRAIKGLLSLKELPDDEADTSPTLSRW RNQPLYISSFLVSQRDMLDSVNRVLGTSDADWKIEHEESQARYKRGMEMLKQGSMLGFGIALYTRTFYPNGDGNF EAKHGLANDALGLPKEDLDEATKRAVGMIKGGFKNPVA* |
| Coding | >Hirsu2|7989 ATGCAGACAAAGTACGCAAAGGACCAGCCTGCGGGCTTCACCAACCGCATCGAGCGCGTGGCCATCGTCGGTGCC AGCGGCCAGGTGGGCAGCCATATGGTGGCCGCGCTGCTGTCGACAGGCAAGCACACCGTCACGGCCATCACACGC CACGGCGGCGGCAACACGATGCCCGAGGGCGTCAAGGTCGCGACGGTCGATTACGACAACGAGGACACGCTGGTC GAAGCGCTCCGCGGCCAGCAGTTCCTCGCCATCTCCCTCTCGGTGCGAGCGGCCCCGGACACGCAGTCCAAGATC ATCAGGGCGGCAGCCAAAGCGGGCGTGCCGTGGGTCATGCCCAACTGCTACGGCACCGACGTCCGCAATGCGTCG CTCGCGGCGGAGAACCTGACGGGCCCCGGCGTGCTGGGCGGCATCGAGGCCATCGAAAAGGAGGGCGTCTCGTCG TGGGTGGCCATGTGCTGCTCGTTCTGGTACGAGTTCTCGCTCGCCATGGGCCCCGGCTGGTACGGCTTCGACTTT GAGAAGCGCCAGGTGACGTTCAACGACGACGGCAAGACGCGCATCAACACGTCGACGTGGGAGCAGTGCGGGCGT GCCATCAAGGGGCTGCTCAGCCTCAAGGAGCTGCCGGATGACGAGGCGGACACGTCGCCGACGCTCTCGCGCTGG CGCAACCAGCCGCTGTACATCTCGAGCTTTCTCGTTTCGCAGCGCGACATGCTCGACAGCGTCAACCGCGTCCTC GGCACCTCCGACGCCGACTGGAAGATCGAGCACGAGGAGAGCCAGGCGCGGTATAAGCGCGGCATGGAAATGCTG AAGCAAGGCTCGATGCTCGGCTTCGGCATCGCCCTCTACACCCGAACCTTTTACCCCAACGGCGACGGCAACTTT GAGGCCAAGCATGGGCTGGCCAACGACGCGTTGGGGTTGCCCAAGGAAGATCTTGACGAGGCAACCAAGAGAGCT GTCGGGATGATAAAGGGTGGATTCAAGAATCCCGTAGCTTAG |
| Transcript | >Hirsu2|7989 ATGCAGACAAAGTACGCAAAGGACCAGCCTGCGGGCTTCACCAACCGCATCGAGCGCGTGGCCATCGTCGGTGCC AGCGGCCAGGTGGGCAGCCATATGGTGGCCGCGCTGCTGTCGACAGGCAAGCACACCGTCACGGCCATCACACGC CACGGCGGCGGCAACACGATGCCCGAGGGCGTCAAGGTCGCGACGGTCGATTACGACAACGAGGACACGCTGGTC GAAGCGCTCCGCGGCCAGCAGTTCCTCGCCATCTCCCTCTCGGTGCGAGCGGCCCCGGACACGCAGTCCAAGATC ATCAGGGCGGCAGCCAAAGCGGGCGTGCCGTGGGTCATGCCCAACTGCTACGGCACCGACGTCCGCAATGCGTCG CTCGCGGCGGAGAACCTGACGGGCCCCGGCGTGCTGGGCGGCATCGAGGCCATCGAAAAGGAGGGCGTCTCGTCG TGGGTGGCCATGTGCTGCTCGTTCTGGTACGAGTTCTCGCTCGCCATGGGCCCCGGCTGGTACGGCTTCGACTTT GAGAAGCGCCAGGTGACGTTCAACGACGACGGCAAGACGCGCATCAACACGTCGACGTGGGAGCAGTGCGGGCGT GCCATCAAGGGGCTGCTCAGCCTCAAGGAGCTGCCGGATGACGAGGCGGACACGTCGCCGACGCTCTCGCGCTGG CGCAACCAGCCGCTGTACATCTCGAGCTTTCTCGTTTCGCAGCGCGACATGCTCGACAGCGTCAACCGCGTCCTC GGCACCTCCGACGCCGACTGGAAGATCGAGCACGAGGAGAGCCAGGCGCGGTATAAGCGCGGCATGGAAATGCTG AAGCAAGGCTCGATGCTCGGCTTCGGCATCGCCCTCTACACCCGAACCTTTTACCCCAACGGCGACGGCAACTTT GAGGCCAAGCATGGGCTGGCCAACGACGCGTTGGGGTTGCCCAAGGAAGATCTTGACGAGGCAACCAAGAGAGCT GTCGGGATGATAAAGGGTGGATTCAAGAATCCCGTAGCTTAG |
| Gene | >Hirsu2|7989 ATGCAGACAAAGTACGCAAAGGACCAGCCTGCGGGCTTCACCAACCGCATCGAGCGCGTGGCCATCGTCGGTGTA AGCAGAGCGCCCGCCGAGGCGACCGGCCACGGCAGATTGGACTGACAGGGCGTCTTCGCCGAATATGCAGGCCAG CGGCCAGGTGGGCAGCCATATGGTGGCCGCGCTGCTGTCGACAGGCAAGCACACCGTCACGGCCATCACACGCCA CGGCGGCGGCAACACGATGCCCGAGGGCGTCAAGGTCGCGACGGTCGATTACGACAACGAGGACACGCTGGTCGA AGCGCTCCGCGGCCAGCAGTTCCTCGCCATCTCCCTCTCGGTGCGAGCGGCCCCGGACACGCAGTCCAAGATCAT CAGGGCGGCAGCCAAAGCGGGCGTGCCGTGGGTCATGCCCAACTGCTACGGCACCGACGTCCGCAATGCGTCGCT CGCGGCGGAGAACCTGACGGGCCCCGGCGTGCTGGGCGGCATCGAGGCCATCGAAAAGGAGGGCGTCTCGTCGTG GGTGGCCATGTGCTGCTCGTTCTGGTACGAGTTCTCGCTCGCCATGGGCCCCGGCTGGTACGGCTTCGACTTTGA GAAGCGCCAGGTGACGTTCAACGACGACGGCAAGACGCGCATCAACACGTCGACGTGGGAGCAGTGCGGGCGTGC CATCAAGGGGCTGCTCAGCCTCAAGGAGCTGCCGGATGACGAGGCGGACACGTCGCCGACGCTCTCGCGCTGGCG CAACCAGCCGCTGTACATCTCGAGCTTTCTCGTTTCGCAGCGCGACATGCTCGACAGCGTCAACCGCGTCCTCGG CACCTCCGACGCCGACTGGAAGATCGAGCACGAGGAGAGCCAGGCGCGGTATAAGCGCGGCATGGAAATGCTGAA GCAAGGCTCGATGCTCGGCTTCGGCATCGCCCTCTACACCCGAACCTTTTACCCCAACGGCGACGGCAACTTTGA GGCCAAGCATGGGCTGGCCAACGACGCGTTGGGGTTGCCCAAGGAAGATCTTGACGAGGCAACCAAGAGAGCTGT CGGGATGATAAAGGGTGGATTCAAGAATCCCGTAGCTTAG |