Protein ID | Hirsu2|7985 |
Gene name | |
Location | Contig_497:6083..6611 |
Strand | + |
Gene length (bp) | 528 |
Transcript length (bp) | 528 |
Coding sequence length (bp) | 528 |
Protein length (aa) | 176 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Endoplasmic reticulum | Signal peptide | 0.419 | 0.3127 | 0.3083 | 0.1852 | 0.2356 | 0.1211 | 0.6606 | 0.4155 | 0.281 | 0.0587 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 15 | 37 | 22 |
2 | 118 | 140 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 10509 |
Change Orthofinder run |
Species | Protein ID |
---|---|
Ophiocordyceps subramaniannii | Hirsu2|7985 (this protein) |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|7985 MAQGPQQAPPAHFLAIPPLSSSLSSLFFLPSTLLLLLPSHARSSTSPAASTTAATQRPTFETEPPFGVDGGGPLS SRRFTLLADDEPRLSQSYETTDRPPWPPPPPAPLTATSHPDTVFLVLLVLLALFFCFFCILSLFALAYLFARDPP EHFSPFFFSPSPRLGSSAAYTYIRA* |
Coding | >Hirsu2|7985 ATGGCCCAGGGCCCCCAACAGGCACCGCCCGCCCATTTTCTCGCCATTCCTCCTCTCTCCTCCTCTCTCTCTTCT CTTTTTTTTCTCCCCTCAACGCTTCTTCTTCTTCTTCCATCTCACGCTCGTTCCTCGACATCGCCCGCCGCTTCG ACGACCGCCGCCACCCAGCGCCCGACCTTCGAGACCGAGCCTCCCTTTGGCGTCGACGGCGGCGGACCCTTGTCT TCCCGTCGTTTCACGCTTCTTGCCGACGACGAACCACGGCTAAGTCAGTCGTATGAGACGACGGACCGCCCGCCT TGGCCTCCACCACCACCGGCACCGCTGACTGCCACCTCCCATCCCGACACCGTCTTCCTCGTCCTCCTCGTCCTC CTCGCCCTCTTCTTCTGCTTCTTCTGTATCTTGTCCTTGTTTGCACTTGCTTATTTGTTTGCCCGCGATCCGCCC GAACATTTTTCGCCTTTTTTTTTCTCACCTTCTCCCCGACTGGGCTCGTCTGCGGCATATACCTACATACGCGCA TAG |
Transcript | >Hirsu2|7985 ATGGCCCAGGGCCCCCAACAGGCACCGCCCGCCCATTTTCTCGCCATTCCTCCTCTCTCCTCCTCTCTCTCTTCT CTTTTTTTTCTCCCCTCAACGCTTCTTCTTCTTCTTCCATCTCACGCTCGTTCCTCGACATCGCCCGCCGCTTCG ACGACCGCCGCCACCCAGCGCCCGACCTTCGAGACCGAGCCTCCCTTTGGCGTCGACGGCGGCGGACCCTTGTCT TCCCGTCGTTTCACGCTTCTTGCCGACGACGAACCACGGCTAAGTCAGTCGTATGAGACGACGGACCGCCCGCCT TGGCCTCCACCACCACCGGCACCGCTGACTGCCACCTCCCATCCCGACACCGTCTTCCTCGTCCTCCTCGTCCTC CTCGCCCTCTTCTTCTGCTTCTTCTGTATCTTGTCCTTGTTTGCACTTGCTTATTTGTTTGCCCGCGATCCGCCC GAACATTTTTCGCCTTTTTTTTTCTCACCTTCTCCCCGACTGGGCTCGTCTGCGGCATATACCTACATACGCGCA TAG |
Gene | >Hirsu2|7985 ATGGCCCAGGGCCCCCAACAGGCACCGCCCGCCCATTTTCTCGCCATTCCTCCTCTCTCCTCCTCTCTCTCTTCT CTTTTTTTTCTCCCCTCAACGCTTCTTCTTCTTCTTCCATCTCACGCTCGTTCCTCGACATCGCCCGCCGCTTCG ACGACCGCCGCCACCCAGCGCCCGACCTTCGAGACCGAGCCTCCCTTTGGCGTCGACGGCGGCGGACCCTTGTCT TCCCGTCGTTTCACGCTTCTTGCCGACGACGAACCACGGCTAAGTCAGTCGTATGAGACGACGGACCGCCCGCCT TGGCCTCCACCACCACCGGCACCGCTGACTGCCACCTCCCATCCCGACACCGTCTTCCTCGTCCTCCTCGTCCTC CTCGCCCTCTTCTTCTGCTTCTTCTGTATCTTGTCCTTGTTTGCACTTGCTTATTTGTTTGCCCGCGATCCGCCC GAACATTTTTCGCCTTTTTTTTTCTCACCTTCTCCCCGACTGGGCTCGTCTGCGGCATATACCTACATACGCGCA TAG |