© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|7985 |
| Gene name | |
| Location | Contig_497:6083..6611 |
| Strand | + |
| Gene length (bp) | 528 |
| Transcript length (bp) | 528 |
| Coding sequence length (bp) | 528 |
| Protein length (aa) | 176 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Endoplasmic reticulum | Signal peptide | 0.419 | 0.3127 | 0.3083 | 0.1852 | 0.2356 | 0.1211 | 0.6606 | 0.4155 | 0.281 | 0.0587 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 15 | 37 | 22 |
| 2 | 118 | 140 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 10509 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|7985 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|7985 MAQGPQQAPPAHFLAIPPLSSSLSSLFFLPSTLLLLLPSHARSSTSPAASTTAATQRPTFETEPPFGVDGGGPLS SRRFTLLADDEPRLSQSYETTDRPPWPPPPPAPLTATSHPDTVFLVLLVLLALFFCFFCILSLFALAYLFARDPP EHFSPFFFSPSPRLGSSAAYTYIRA* |
| Coding | >Hirsu2|7985 ATGGCCCAGGGCCCCCAACAGGCACCGCCCGCCCATTTTCTCGCCATTCCTCCTCTCTCCTCCTCTCTCTCTTCT CTTTTTTTTCTCCCCTCAACGCTTCTTCTTCTTCTTCCATCTCACGCTCGTTCCTCGACATCGCCCGCCGCTTCG ACGACCGCCGCCACCCAGCGCCCGACCTTCGAGACCGAGCCTCCCTTTGGCGTCGACGGCGGCGGACCCTTGTCT TCCCGTCGTTTCACGCTTCTTGCCGACGACGAACCACGGCTAAGTCAGTCGTATGAGACGACGGACCGCCCGCCT TGGCCTCCACCACCACCGGCACCGCTGACTGCCACCTCCCATCCCGACACCGTCTTCCTCGTCCTCCTCGTCCTC CTCGCCCTCTTCTTCTGCTTCTTCTGTATCTTGTCCTTGTTTGCACTTGCTTATTTGTTTGCCCGCGATCCGCCC GAACATTTTTCGCCTTTTTTTTTCTCACCTTCTCCCCGACTGGGCTCGTCTGCGGCATATACCTACATACGCGCA TAG |
| Transcript | >Hirsu2|7985 ATGGCCCAGGGCCCCCAACAGGCACCGCCCGCCCATTTTCTCGCCATTCCTCCTCTCTCCTCCTCTCTCTCTTCT CTTTTTTTTCTCCCCTCAACGCTTCTTCTTCTTCTTCCATCTCACGCTCGTTCCTCGACATCGCCCGCCGCTTCG ACGACCGCCGCCACCCAGCGCCCGACCTTCGAGACCGAGCCTCCCTTTGGCGTCGACGGCGGCGGACCCTTGTCT TCCCGTCGTTTCACGCTTCTTGCCGACGACGAACCACGGCTAAGTCAGTCGTATGAGACGACGGACCGCCCGCCT TGGCCTCCACCACCACCGGCACCGCTGACTGCCACCTCCCATCCCGACACCGTCTTCCTCGTCCTCCTCGTCCTC CTCGCCCTCTTCTTCTGCTTCTTCTGTATCTTGTCCTTGTTTGCACTTGCTTATTTGTTTGCCCGCGATCCGCCC GAACATTTTTCGCCTTTTTTTTTCTCACCTTCTCCCCGACTGGGCTCGTCTGCGGCATATACCTACATACGCGCA TAG |
| Gene | >Hirsu2|7985 ATGGCCCAGGGCCCCCAACAGGCACCGCCCGCCCATTTTCTCGCCATTCCTCCTCTCTCCTCCTCTCTCTCTTCT CTTTTTTTTCTCCCCTCAACGCTTCTTCTTCTTCTTCCATCTCACGCTCGTTCCTCGACATCGCCCGCCGCTTCG ACGACCGCCGCCACCCAGCGCCCGACCTTCGAGACCGAGCCTCCCTTTGGCGTCGACGGCGGCGGACCCTTGTCT TCCCGTCGTTTCACGCTTCTTGCCGACGACGAACCACGGCTAAGTCAGTCGTATGAGACGACGGACCGCCCGCCT TGGCCTCCACCACCACCGGCACCGCTGACTGCCACCTCCCATCCCGACACCGTCTTCCTCGTCCTCCTCGTCCTC CTCGCCCTCTTCTTCTGCTTCTTCTGTATCTTGTCCTTGTTTGCACTTGCTTATTTGTTTGCCCGCGATCCGCCC GAACATTTTTCGCCTTTTTTTTTCTCACCTTCTCCCCGACTGGGCTCGTCTGCGGCATATACCTACATACGCGCA TAG |