Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7985
Gene name
LocationContig_497:6083..6611
Strand+
Gene length (bp)528
Transcript length (bp)528
Coding sequence length (bp)528
Protein length (aa) 176

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Endoplasmic reticulum Signal peptide 0.419 0.3127 0.3083 0.1852 0.2356 0.1211 0.6606 0.4155 0.281 0.0587

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 15 37 22
2 118 140 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup10509
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|7985 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7985
MAQGPQQAPPAHFLAIPPLSSSLSSLFFLPSTLLLLLPSHARSSTSPAASTTAATQRPTFETEPPFGVDGGGPLS
SRRFTLLADDEPRLSQSYETTDRPPWPPPPPAPLTATSHPDTVFLVLLVLLALFFCFFCILSLFALAYLFARDPP
EHFSPFFFSPSPRLGSSAAYTYIRA*
Coding >Hirsu2|7985
ATGGCCCAGGGCCCCCAACAGGCACCGCCCGCCCATTTTCTCGCCATTCCTCCTCTCTCCTCCTCTCTCTCTTCT
CTTTTTTTTCTCCCCTCAACGCTTCTTCTTCTTCTTCCATCTCACGCTCGTTCCTCGACATCGCCCGCCGCTTCG
ACGACCGCCGCCACCCAGCGCCCGACCTTCGAGACCGAGCCTCCCTTTGGCGTCGACGGCGGCGGACCCTTGTCT
TCCCGTCGTTTCACGCTTCTTGCCGACGACGAACCACGGCTAAGTCAGTCGTATGAGACGACGGACCGCCCGCCT
TGGCCTCCACCACCACCGGCACCGCTGACTGCCACCTCCCATCCCGACACCGTCTTCCTCGTCCTCCTCGTCCTC
CTCGCCCTCTTCTTCTGCTTCTTCTGTATCTTGTCCTTGTTTGCACTTGCTTATTTGTTTGCCCGCGATCCGCCC
GAACATTTTTCGCCTTTTTTTTTCTCACCTTCTCCCCGACTGGGCTCGTCTGCGGCATATACCTACATACGCGCA
TAG
Transcript >Hirsu2|7985
ATGGCCCAGGGCCCCCAACAGGCACCGCCCGCCCATTTTCTCGCCATTCCTCCTCTCTCCTCCTCTCTCTCTTCT
CTTTTTTTTCTCCCCTCAACGCTTCTTCTTCTTCTTCCATCTCACGCTCGTTCCTCGACATCGCCCGCCGCTTCG
ACGACCGCCGCCACCCAGCGCCCGACCTTCGAGACCGAGCCTCCCTTTGGCGTCGACGGCGGCGGACCCTTGTCT
TCCCGTCGTTTCACGCTTCTTGCCGACGACGAACCACGGCTAAGTCAGTCGTATGAGACGACGGACCGCCCGCCT
TGGCCTCCACCACCACCGGCACCGCTGACTGCCACCTCCCATCCCGACACCGTCTTCCTCGTCCTCCTCGTCCTC
CTCGCCCTCTTCTTCTGCTTCTTCTGTATCTTGTCCTTGTTTGCACTTGCTTATTTGTTTGCCCGCGATCCGCCC
GAACATTTTTCGCCTTTTTTTTTCTCACCTTCTCCCCGACTGGGCTCGTCTGCGGCATATACCTACATACGCGCA
TAG
Gene >Hirsu2|7985
ATGGCCCAGGGCCCCCAACAGGCACCGCCCGCCCATTTTCTCGCCATTCCTCCTCTCTCCTCCTCTCTCTCTTCT
CTTTTTTTTCTCCCCTCAACGCTTCTTCTTCTTCTTCCATCTCACGCTCGTTCCTCGACATCGCCCGCCGCTTCG
ACGACCGCCGCCACCCAGCGCCCGACCTTCGAGACCGAGCCTCCCTTTGGCGTCGACGGCGGCGGACCCTTGTCT
TCCCGTCGTTTCACGCTTCTTGCCGACGACGAACCACGGCTAAGTCAGTCGTATGAGACGACGGACCGCCCGCCT
TGGCCTCCACCACCACCGGCACCGCTGACTGCCACCTCCCATCCCGACACCGTCTTCCTCGTCCTCCTCGTCCTC
CTCGCCCTCTTCTTCTGCTTCTTCTGTATCTTGTCCTTGTTTGCACTTGCTTATTTGTTTGCCCGCGATCCGCCC
GAACATTTTTCGCCTTTTTTTTTCTCACCTTCTCCCCGACTGGGCTCGTCTGCGGCATATACCTACATACGCGCA
TAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail