Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7981
Gene name
LocationContig_496:16704..17845
Strand+
Gene length (bp)1141
Transcript length (bp)1077
Coding sequence length (bp)1077
Protein length (aa) 359

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04734 Ceramidase_alk Neutral/alkaline non-lysosomal ceramidase, N-terminal 5.4E-129 35 355

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q304B9|NCASE_ARATH Neutral ceramidase OS=Arabidopsis thaliana GN=At2g38010 PE=3 SV=1 35 355 7.0E-62
sp|Q5W7F1|ASAH2_DANRE Neutral ceramidase OS=Danio rerio GN=asah2 PE=1 SV=1 35 355 3.0E-58
sp|Q91XT9|ASAH2_RAT Neutral ceramidase OS=Rattus norvegicus GN=Asah2 PE=1 SV=1 35 357 3.0E-58
sp|Q9JHE3|ASAH2_MOUSE Neutral ceramidase OS=Mus musculus GN=Asah2 PE=1 SV=1 35 357 9.0E-58
sp|Q9NR71|ASAH2_HUMAN Neutral ceramidase OS=Homo sapiens GN=ASAH2 PE=1 SV=2 35 357 4.0E-56
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Swissprot ID Swissprot Description Start End E-value
sp|Q304B9|NCASE_ARATH Neutral ceramidase OS=Arabidopsis thaliana GN=At2g38010 PE=3 SV=1 35 355 7.0E-62
sp|Q5W7F1|ASAH2_DANRE Neutral ceramidase OS=Danio rerio GN=asah2 PE=1 SV=1 35 355 3.0E-58
sp|Q91XT9|ASAH2_RAT Neutral ceramidase OS=Rattus norvegicus GN=Asah2 PE=1 SV=1 35 357 3.0E-58
sp|Q9JHE3|ASAH2_MOUSE Neutral ceramidase OS=Mus musculus GN=Asah2 PE=1 SV=1 35 357 9.0E-58
sp|Q9NR71|ASAH2_HUMAN Neutral ceramidase OS=Homo sapiens GN=ASAH2 PE=1 SV=2 35 357 4.0E-56
sp|Q9VA70|NCASE_DROME Neutral ceramidase OS=Drosophila melanogaster GN=CDase PE=1 SV=1 35 328 7.0E-56
sp|Q29C43|NCASE_DROPS Neutral ceramidase OS=Drosophila pseudoobscura pseudoobscura GN=CDase PE=3 SV=1 35 328 1.0E-55
sp|Q55G11|NCSEB_DICDI Neutral ceramidase B OS=Dictyostelium discoideum GN=dcd2B PE=3 SV=1 35 355 1.0E-52
sp|Q0JL46|NCASE_ORYSJ Neutral ceramidase OS=Oryza sativa subsp. japonica GN=Os01g0624000 PE=1 SV=1 35 267 1.0E-50
sp|Q54BK2|NCSEA_DICDI Neutral ceramidase A OS=Dictyostelium discoideum GN=dcd2A PE=1 SV=1 35 355 3.0E-48
sp|Q9I596|NCASE_PSEAE Neutral ceramidase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA0845 PE=1 SV=1 35 354 3.0E-42
sp|O06769|NCASE_MYCTU Neutral ceramidase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv0669c PE=1 SV=1 37 297 9.0E-40
sp|Q0JL46|NCASE_ORYSJ Neutral ceramidase OS=Oryza sativa subsp. japonica GN=Os01g0624000 PE=1 SV=1 251 355 5.0E-12
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 30 0.45

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7981
MDRWRGPVVFGRLVGLVALWLWAAGAAGAGRGDRYLVGVGKADITGPVVEVGFAGYANTEQVGTGLRQRLHSRAF
VVADPERPRDRFVYLVLDAQSGDTAVRNGVLDGLRALGGDYAELYGDANVALTGTHSHAGPGAWFNYLLPQITTL
GFDRQSYQALVDGAVLSVKRAHDSLQEGHLDVGTTTIADGAINRSLFAYLANPAAERERYGAATTDTTMTLLRLR
RASDGRSIGVLSWFPVHGTSLLGNHTHAAADNKGVAAWMLEEAMRGHASAAPGFVAGFSQANVGDTTPNVLGAYC
DDGSGQPCSLERSTCADGKSQSCHGRGPEFRALDLGVRSCHEMGRRQFAGAKKIYVTR*
Coding >Hirsu2|7981
ATGGACCGGTGGCGCGGACCGGTCGTCTTCGGCCGCCTCGTCGGCCTCGTCGCCCTGTGGCTCTGGGCCGCCGGG
GCCGCCGGGGCCGGGCGCGGAGACCGATACCTGGTCGGGGTCGGCAAGGCGGACATCACGGGCCCCGTGGTCGAG
GTCGGCTTCGCCGGCTATGCCAACACGGAGCAGGTGGGCACGGGCCTGCGGCAGCGGCTGCACAGCCGGGCGTTC
GTGGTGGCGGACCCGGAGCGGCCGCGCGACCGGTTCGTCTACCTGGTGCTGGACGCGCAGTCGGGCGACACGGCG
GTGCGCAACGGCGTGCTGGACGGGCTGCGGGCGCTGGGCGGCGACTACGCCGAGCTGTACGGCGACGCCAACGTG
GCCCTGACGGGCACGCACAGCCACGCCGGGCCGGGCGCCTGGTTCAACTACCTGCTGCCGCAGATCACGACGCTC
GGCTTCGACCGGCAGAGCTACCAGGCGCTCGTCGACGGCGCCGTGCTGTCGGTCAAGCGCGCGCACGACAGCCTG
CAGGAGGGCCACCTGGACGTGGGCACGACGACCATCGCCGACGGCGCCATCAACCGCTCCCTCTTCGCCTACCTG
GCCAACCCGGCGGCGGAGCGGGAGCGGTACGGCGCGGCGACGACGGACACGACGATGACGCTGCTGCGCCTGCGC
CGCGCCTCGGACGGCCGCAGCATCGGCGTCCTCAGCTGGTTCCCCGTCCACGGCACCTCGCTGCTCGGCAACCAC
ACGCACGCGGCCGCCGACAACAAGGGCGTCGCCGCCTGGATGCTGGAGGAGGCGATGCGCGGCCACGCCTCGGCC
GCGCCCGGCTTCGTCGCCGGCTTCAGCCAGGCCAACGTCGGCGACACGACGCCCAACGTCCTCGGCGCCTACTGC
GACGACGGCTCCGGCCAGCCCTGCAGCCTCGAGCGCAGCACCTGCGCCGACGGCAAGTCGCAGAGCTGCCACGGC
CGCGGGCCCGAGTTCCGCGCCCTCGACCTCGGCGTCCGCAGCTGCCACGAGATGGGCCGGCGCCAGTTTGCCGGC
GCCAAGAAGATTTATGTGACCCGCTGA
Transcript >Hirsu2|7981
ATGGACCGGTGGCGCGGACCGGTCGTCTTCGGCCGCCTCGTCGGCCTCGTCGCCCTGTGGCTCTGGGCCGCCGGG
GCCGCCGGGGCCGGGCGCGGAGACCGATACCTGGTCGGGGTCGGCAAGGCGGACATCACGGGCCCCGTGGTCGAG
GTCGGCTTCGCCGGCTATGCCAACACGGAGCAGGTGGGCACGGGCCTGCGGCAGCGGCTGCACAGCCGGGCGTTC
GTGGTGGCGGACCCGGAGCGGCCGCGCGACCGGTTCGTCTACCTGGTGCTGGACGCGCAGTCGGGCGACACGGCG
GTGCGCAACGGCGTGCTGGACGGGCTGCGGGCGCTGGGCGGCGACTACGCCGAGCTGTACGGCGACGCCAACGTG
GCCCTGACGGGCACGCACAGCCACGCCGGGCCGGGCGCCTGGTTCAACTACCTGCTGCCGCAGATCACGACGCTC
GGCTTCGACCGGCAGAGCTACCAGGCGCTCGTCGACGGCGCCGTGCTGTCGGTCAAGCGCGCGCACGACAGCCTG
CAGGAGGGCCACCTGGACGTGGGCACGACGACCATCGCCGACGGCGCCATCAACCGCTCCCTCTTCGCCTACCTG
GCCAACCCGGCGGCGGAGCGGGAGCGGTACGGCGCGGCGACGACGGACACGACGATGACGCTGCTGCGCCTGCGC
CGCGCCTCGGACGGCCGCAGCATCGGCGTCCTCAGCTGGTTCCCCGTCCACGGCACCTCGCTGCTCGGCAACCAC
ACGCACGCGGCCGCCGACAACAAGGGCGTCGCCGCCTGGATGCTGGAGGAGGCGATGCGCGGCCACGCCTCGGCC
GCGCCCGGCTTCGTCGCCGGCTTCAGCCAGGCCAACGTCGGCGACACGACGCCCAACGTCCTCGGCGCCTACTGC
GACGACGGCTCCGGCCAGCCCTGCAGCCTCGAGCGCAGCACCTGCGCCGACGGCAAGTCGCAGAGCTGCCACGGC
CGCGGGCCCGAGTTCCGCGCCCTCGACCTCGGCGTCCGCAGCTGCCACGAGATGGGCCGGCGCCAGTTTGCCGGC
GCCAAGAAGATTTATGTGACCCGCTGA
Gene >Hirsu2|7981
ATGGACCGGTGGCGCGGACCGGTCGTCTTCGGCCGCCTCGTCGGCCTCGTCGCCCTGTGGCTCTGGGCCGCCGGG
GCCGCCGGGGCCGGGCGCGGAGACCGATACCTGGTCGGGGTCGGCAAGGCGGACATCACGGGCCCCGTGGTCGAG
GTCGGCTTCGCCGGCTATGCCAACACGGAGCAGGTGGGCACGGGCCTGCGGCAGCGGCTGCACAGCCGGGCGTTC
GTGGTGGCGGACCCGGAGCGGCCGCGCGACCGGTTCGTCTACCTGGTGCTGGACGCGCAGTCGGGCGACACGGCG
GTGCGCAACGGCGTGCTGGACGGGCTGCGGGCGCTGGGCGGCGACTACGCCGAGCTGTACGGCGACGCCAACGTG
GCCCTGACGGGCACGCACAGCCACGCCGGGCCGGGCGCCTGGTTCAACTACCTGCTGCCGCAGATCACGACGCTC
GGCTTCGACCGGCAGAGCTACCAGGCGCTCGTCGACGGCGCCGTGCTGTCGGTCAAGCGCGCGCACGACAGCCTG
CAGGAGGGCCACCTGGACGTGGGCACGACGACCATCGCCGACGGCGCCATCAACCGCTCCCTCTTCGCCTACCTG
GCCAACCCGGCGGCGGAGCGGGAGCGGTACGGCGCGGCGACGACGGACACGACGATGACGCTGCTGCGCCTGCGC
CGCGCCTCGGACGGCCGCAGCATCGGCGTCCTCAGCTGGTTCCCCGTCCACGGCACCTCGCTGCTCGGCAACCAC
ACGCACGCGGCCGCCGACAACAAGGGCGTCGCCGCCTGGATGCTGGAGGAGGCGATGCGCGGCCACGCCTCGGCC
GCGCCCGGCTTCGTCGCCGGCTTCAGCCAGGCCAACGTCGGCGACACGACGCCCAACGTCCTCGGCGCCTACTGC
GACGACGGCTCCGGCCAGCCCTGCAGCCTCGAGCGCAGCACCTGCGCCGACGGCAAGTCGCAGAGCTGCCACGGC
CGCGGGCCCGAGTTCCGCGCCCTCGACCTCGGCGTCCGCAGCTGCCACGAGATGGGCCGGCGCCAGTTTGCCGGC
GCCAAGAAGATTTATGTGAGTTTCCCCCCCCCCCGCCGTCGTCGACGCGTATATATACATACACCCCAATACATC
AAATCAAGCCCGCTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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