Protein ID | Hirsu2|7981 |
Gene name | |
Location | Contig_496:16704..17845 |
Strand | + |
Gene length (bp) | 1141 |
Transcript length (bp) | 1077 |
Coding sequence length (bp) | 1077 |
Protein length (aa) | 359 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04734 | Ceramidase_alk | Neutral/alkaline non-lysosomal ceramidase, N-terminal | 5.9E-131 | 35 | 355 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q304B9|NCASE_ARATH | Neutral ceramidase OS=Arabidopsis thaliana GN=At2g38010 PE=3 SV=1 | 35 | 355 | 7.0E-62 |
sp|Q5W7F1|ASAH2_DANRE | Neutral ceramidase OS=Danio rerio GN=asah2 PE=1 SV=1 | 35 | 355 | 3.0E-58 |
sp|Q91XT9|ASAH2_RAT | Neutral ceramidase OS=Rattus norvegicus GN=Asah2 PE=1 SV=1 | 35 | 357 | 3.0E-58 |
sp|Q9JHE3|ASAH2_MOUSE | Neutral ceramidase OS=Mus musculus GN=Asah2 PE=1 SV=1 | 35 | 357 | 9.0E-58 |
sp|Q9NR71|ASAH2_HUMAN | Neutral ceramidase OS=Homo sapiens GN=ASAH2 PE=1 SV=2 | 35 | 357 | 4.0E-56 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q304B9|NCASE_ARATH | Neutral ceramidase OS=Arabidopsis thaliana GN=At2g38010 PE=3 SV=1 | 35 | 355 | 7.0E-62 |
sp|Q5W7F1|ASAH2_DANRE | Neutral ceramidase OS=Danio rerio GN=asah2 PE=1 SV=1 | 35 | 355 | 3.0E-58 |
sp|Q91XT9|ASAH2_RAT | Neutral ceramidase OS=Rattus norvegicus GN=Asah2 PE=1 SV=1 | 35 | 357 | 3.0E-58 |
sp|Q9JHE3|ASAH2_MOUSE | Neutral ceramidase OS=Mus musculus GN=Asah2 PE=1 SV=1 | 35 | 357 | 9.0E-58 |
sp|Q9NR71|ASAH2_HUMAN | Neutral ceramidase OS=Homo sapiens GN=ASAH2 PE=1 SV=2 | 35 | 357 | 4.0E-56 |
sp|Q9VA70|NCASE_DROME | Neutral ceramidase OS=Drosophila melanogaster GN=CDase PE=1 SV=1 | 35 | 328 | 7.0E-56 |
sp|Q29C43|NCASE_DROPS | Neutral ceramidase OS=Drosophila pseudoobscura pseudoobscura GN=CDase PE=3 SV=1 | 35 | 328 | 1.0E-55 |
sp|Q55G11|NCSEB_DICDI | Neutral ceramidase B OS=Dictyostelium discoideum GN=dcd2B PE=3 SV=1 | 35 | 355 | 1.0E-52 |
sp|Q0JL46|NCASE_ORYSJ | Neutral ceramidase OS=Oryza sativa subsp. japonica GN=Os01g0624000 PE=1 SV=1 | 35 | 267 | 1.0E-50 |
sp|Q54BK2|NCSEA_DICDI | Neutral ceramidase A OS=Dictyostelium discoideum GN=dcd2A PE=1 SV=1 | 35 | 355 | 3.0E-48 |
sp|Q9I596|NCASE_PSEAE | Neutral ceramidase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA0845 PE=1 SV=1 | 35 | 354 | 3.0E-42 |
sp|O06769|NCASE_MYCTU | Neutral ceramidase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv0669c PE=1 SV=1 | 37 | 297 | 9.0E-40 |
sp|Q0JL46|NCASE_ORYSJ | Neutral ceramidase OS=Oryza sativa subsp. japonica GN=Os01g0624000 PE=1 SV=1 | 251 | 355 | 5.0E-12 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1501 | 0.0928 | 0.7325 | 0.1863 | 0.1115 | 0.0329 | 0.5 | 0.5492 | 0.2614 | 0.0055 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 28 | 0.866206 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 29 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 74 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|7981 MDRWRGPVVFGRLVGLVALWLWAAGAAGAGRGDRYLVGVGKADITGPVVEVGFAGYANTEQVGTGLRQRLHSRAF VVADPERPRDRFVYLVLDAQSGDTAVRNGVLDGLRALGGDYAELYGDANVALTGTHSHAGPGAWFNYLLPQITTL GFDRQSYQALVDGAVLSVKRAHDSLQEGHLDVGTTTIADGAINRSLFAYLANPAAERERYGAATTDTTMTLLRLR RASDGRSIGVLSWFPVHGTSLLGNHTHAAADNKGVAAWMLEEAMRGHASAAPGFVAGFSQANVGDTTPNVLGAYC DDGSGQPCSLERSTCADGKSQSCHGRGPEFRALDLGVRSCHEMGRRQFAGAKKIYVTR* |
Coding | >Hirsu2|7981 ATGGACCGGTGGCGCGGACCGGTCGTCTTCGGCCGCCTCGTCGGCCTCGTCGCCCTGTGGCTCTGGGCCGCCGGG GCCGCCGGGGCCGGGCGCGGAGACCGATACCTGGTCGGGGTCGGCAAGGCGGACATCACGGGCCCCGTGGTCGAG GTCGGCTTCGCCGGCTATGCCAACACGGAGCAGGTGGGCACGGGCCTGCGGCAGCGGCTGCACAGCCGGGCGTTC GTGGTGGCGGACCCGGAGCGGCCGCGCGACCGGTTCGTCTACCTGGTGCTGGACGCGCAGTCGGGCGACACGGCG GTGCGCAACGGCGTGCTGGACGGGCTGCGGGCGCTGGGCGGCGACTACGCCGAGCTGTACGGCGACGCCAACGTG GCCCTGACGGGCACGCACAGCCACGCCGGGCCGGGCGCCTGGTTCAACTACCTGCTGCCGCAGATCACGACGCTC GGCTTCGACCGGCAGAGCTACCAGGCGCTCGTCGACGGCGCCGTGCTGTCGGTCAAGCGCGCGCACGACAGCCTG CAGGAGGGCCACCTGGACGTGGGCACGACGACCATCGCCGACGGCGCCATCAACCGCTCCCTCTTCGCCTACCTG GCCAACCCGGCGGCGGAGCGGGAGCGGTACGGCGCGGCGACGACGGACACGACGATGACGCTGCTGCGCCTGCGC CGCGCCTCGGACGGCCGCAGCATCGGCGTCCTCAGCTGGTTCCCCGTCCACGGCACCTCGCTGCTCGGCAACCAC ACGCACGCGGCCGCCGACAACAAGGGCGTCGCCGCCTGGATGCTGGAGGAGGCGATGCGCGGCCACGCCTCGGCC GCGCCCGGCTTCGTCGCCGGCTTCAGCCAGGCCAACGTCGGCGACACGACGCCCAACGTCCTCGGCGCCTACTGC GACGACGGCTCCGGCCAGCCCTGCAGCCTCGAGCGCAGCACCTGCGCCGACGGCAAGTCGCAGAGCTGCCACGGC CGCGGGCCCGAGTTCCGCGCCCTCGACCTCGGCGTCCGCAGCTGCCACGAGATGGGCCGGCGCCAGTTTGCCGGC GCCAAGAAGATTTATGTGACCCGCTGA |
Transcript | >Hirsu2|7981 ATGGACCGGTGGCGCGGACCGGTCGTCTTCGGCCGCCTCGTCGGCCTCGTCGCCCTGTGGCTCTGGGCCGCCGGG GCCGCCGGGGCCGGGCGCGGAGACCGATACCTGGTCGGGGTCGGCAAGGCGGACATCACGGGCCCCGTGGTCGAG GTCGGCTTCGCCGGCTATGCCAACACGGAGCAGGTGGGCACGGGCCTGCGGCAGCGGCTGCACAGCCGGGCGTTC GTGGTGGCGGACCCGGAGCGGCCGCGCGACCGGTTCGTCTACCTGGTGCTGGACGCGCAGTCGGGCGACACGGCG GTGCGCAACGGCGTGCTGGACGGGCTGCGGGCGCTGGGCGGCGACTACGCCGAGCTGTACGGCGACGCCAACGTG GCCCTGACGGGCACGCACAGCCACGCCGGGCCGGGCGCCTGGTTCAACTACCTGCTGCCGCAGATCACGACGCTC GGCTTCGACCGGCAGAGCTACCAGGCGCTCGTCGACGGCGCCGTGCTGTCGGTCAAGCGCGCGCACGACAGCCTG CAGGAGGGCCACCTGGACGTGGGCACGACGACCATCGCCGACGGCGCCATCAACCGCTCCCTCTTCGCCTACCTG GCCAACCCGGCGGCGGAGCGGGAGCGGTACGGCGCGGCGACGACGGACACGACGATGACGCTGCTGCGCCTGCGC CGCGCCTCGGACGGCCGCAGCATCGGCGTCCTCAGCTGGTTCCCCGTCCACGGCACCTCGCTGCTCGGCAACCAC ACGCACGCGGCCGCCGACAACAAGGGCGTCGCCGCCTGGATGCTGGAGGAGGCGATGCGCGGCCACGCCTCGGCC GCGCCCGGCTTCGTCGCCGGCTTCAGCCAGGCCAACGTCGGCGACACGACGCCCAACGTCCTCGGCGCCTACTGC GACGACGGCTCCGGCCAGCCCTGCAGCCTCGAGCGCAGCACCTGCGCCGACGGCAAGTCGCAGAGCTGCCACGGC CGCGGGCCCGAGTTCCGCGCCCTCGACCTCGGCGTCCGCAGCTGCCACGAGATGGGCCGGCGCCAGTTTGCCGGC GCCAAGAAGATTTATGTGACCCGCTGA |
Gene | >Hirsu2|7981 ATGGACCGGTGGCGCGGACCGGTCGTCTTCGGCCGCCTCGTCGGCCTCGTCGCCCTGTGGCTCTGGGCCGCCGGG GCCGCCGGGGCCGGGCGCGGAGACCGATACCTGGTCGGGGTCGGCAAGGCGGACATCACGGGCCCCGTGGTCGAG GTCGGCTTCGCCGGCTATGCCAACACGGAGCAGGTGGGCACGGGCCTGCGGCAGCGGCTGCACAGCCGGGCGTTC GTGGTGGCGGACCCGGAGCGGCCGCGCGACCGGTTCGTCTACCTGGTGCTGGACGCGCAGTCGGGCGACACGGCG GTGCGCAACGGCGTGCTGGACGGGCTGCGGGCGCTGGGCGGCGACTACGCCGAGCTGTACGGCGACGCCAACGTG GCCCTGACGGGCACGCACAGCCACGCCGGGCCGGGCGCCTGGTTCAACTACCTGCTGCCGCAGATCACGACGCTC GGCTTCGACCGGCAGAGCTACCAGGCGCTCGTCGACGGCGCCGTGCTGTCGGTCAAGCGCGCGCACGACAGCCTG CAGGAGGGCCACCTGGACGTGGGCACGACGACCATCGCCGACGGCGCCATCAACCGCTCCCTCTTCGCCTACCTG GCCAACCCGGCGGCGGAGCGGGAGCGGTACGGCGCGGCGACGACGGACACGACGATGACGCTGCTGCGCCTGCGC CGCGCCTCGGACGGCCGCAGCATCGGCGTCCTCAGCTGGTTCCCCGTCCACGGCACCTCGCTGCTCGGCAACCAC ACGCACGCGGCCGCCGACAACAAGGGCGTCGCCGCCTGGATGCTGGAGGAGGCGATGCGCGGCCACGCCTCGGCC GCGCCCGGCTTCGTCGCCGGCTTCAGCCAGGCCAACGTCGGCGACACGACGCCCAACGTCCTCGGCGCCTACTGC GACGACGGCTCCGGCCAGCCCTGCAGCCTCGAGCGCAGCACCTGCGCCGACGGCAAGTCGCAGAGCTGCCACGGC CGCGGGCCCGAGTTCCGCGCCCTCGACCTCGGCGTCCGCAGCTGCCACGAGATGGGCCGGCGCCAGTTTGCCGGC GCCAAGAAGATTTATGTGAGTTTCCCCCCCCCCCGCCGTCGTCGACGCGTATATATACATACACCCCAATACATC AAATCAAGCCCGCTGA |