Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|7981
Gene name
Location	Contig_496:16704..17845
Strand	+
Gene length (bp)	1141
Transcript length (bp)	1077
Coding sequence length (bp)	1077
Protein length (aa)	359

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04734	Ceramidase_alk	Neutral/alkaline non-lysosomal ceramidase, N-terminal	5.9E-131	35	355

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q304B9\|NCASE_ARATH	Neutral ceramidase OS=Arabidopsis thaliana GN=At2g38010 PE=3 SV=1	35	355	7.0E-62
sp\|Q5W7F1\|ASAH2_DANRE	Neutral ceramidase OS=Danio rerio GN=asah2 PE=1 SV=1	35	355	3.0E-58
sp\|Q91XT9\|ASAH2_RAT	Neutral ceramidase OS=Rattus norvegicus GN=Asah2 PE=1 SV=1	35	357	3.0E-58
sp\|Q9JHE3\|ASAH2_MOUSE	Neutral ceramidase OS=Mus musculus GN=Asah2 PE=1 SV=1	35	357	9.0E-58
sp\|Q9NR71\|ASAH2_HUMAN	Neutral ceramidase OS=Homo sapiens GN=ASAH2 PE=1 SV=2	35	357	4.0E-56

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q304B9\|NCASE_ARATH	Neutral ceramidase OS=Arabidopsis thaliana GN=At2g38010 PE=3 SV=1	35	355	7.0E-62
sp\|Q5W7F1\|ASAH2_DANRE	Neutral ceramidase OS=Danio rerio GN=asah2 PE=1 SV=1	35	355	3.0E-58
sp\|Q91XT9\|ASAH2_RAT	Neutral ceramidase OS=Rattus norvegicus GN=Asah2 PE=1 SV=1	35	357	3.0E-58
sp\|Q9JHE3\|ASAH2_MOUSE	Neutral ceramidase OS=Mus musculus GN=Asah2 PE=1 SV=1	35	357	9.0E-58
sp\|Q9NR71\|ASAH2_HUMAN	Neutral ceramidase OS=Homo sapiens GN=ASAH2 PE=1 SV=2	35	357	4.0E-56
sp\|Q9VA70\|NCASE_DROME	Neutral ceramidase OS=Drosophila melanogaster GN=CDase PE=1 SV=1	35	328	7.0E-56
sp\|Q29C43\|NCASE_DROPS	Neutral ceramidase OS=Drosophila pseudoobscura pseudoobscura GN=CDase PE=3 SV=1	35	328	1.0E-55
sp\|Q55G11\|NCSEB_DICDI	Neutral ceramidase B OS=Dictyostelium discoideum GN=dcd2B PE=3 SV=1	35	355	1.0E-52
sp\|Q0JL46\|NCASE_ORYSJ	Neutral ceramidase OS=Oryza sativa subsp. japonica GN=Os01g0624000 PE=1 SV=1	35	267	1.0E-50
sp\|Q54BK2\|NCSEA_DICDI	Neutral ceramidase A OS=Dictyostelium discoideum GN=dcd2A PE=1 SV=1	35	355	3.0E-48
sp\|Q9I596\|NCASE_PSEAE	Neutral ceramidase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA0845 PE=1 SV=1	35	354	3.0E-42
sp\|O06769\|NCASE_MYCTU	Neutral ceramidase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv0669c PE=1 SV=1	37	297	9.0E-40
sp\|Q0JL46\|NCASE_ORYSJ	Neutral ceramidase OS=Oryza sativa subsp. japonica GN=Os01g0624000 PE=1 SV=1	251	355	5.0E-12

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 30	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	7	29	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|7981 MDRWRGPVVFGRLVGLVALWLWAAGAAGAGRGDRYLVGVGKADITGPVVEVGFAGYANTEQVGTGLRQRLHSRAF VVADPERPRDRFVYLVLDAQSGDTAVRNGVLDGLRALGGDYAELYGDANVALTGTHSHAGPGAWFNYLLPQITTL GFDRQSYQALVDGAVLSVKRAHDSLQEGHLDVGTTTIADGAINRSLFAYLANPAAERERYGAATTDTTMTLLRLR RASDGRSIGVLSWFPVHGTSLLGNHTHAAADNKGVAAWMLEEAMRGHASAAPGFVAGFSQANVGDTTPNVLGAYC DDGSGQPCSLERSTCADGKSQSCHGRGPEFRALDLGVRSCHEMGRRQFAGAKKIYVTR*
Coding	>Hirsu2\|7981 ATGGACCGGTGGCGCGGACCGGTCGTCTTCGGCCGCCTCGTCGGCCTCGTCGCCCTGTGGCTCTGGGCCGCCGGG GCCGCCGGGGCCGGGCGCGGAGACCGATACCTGGTCGGGGTCGGCAAGGCGGACATCACGGGCCCCGTGGTCGAG GTCGGCTTCGCCGGCTATGCCAACACGGAGCAGGTGGGCACGGGCCTGCGGCAGCGGCTGCACAGCCGGGCGTTC GTGGTGGCGGACCCGGAGCGGCCGCGCGACCGGTTCGTCTACCTGGTGCTGGACGCGCAGTCGGGCGACACGGCG GTGCGCAACGGCGTGCTGGACGGGCTGCGGGCGCTGGGCGGCGACTACGCCGAGCTGTACGGCGACGCCAACGTG GCCCTGACGGGCACGCACAGCCACGCCGGGCCGGGCGCCTGGTTCAACTACCTGCTGCCGCAGATCACGACGCTC GGCTTCGACCGGCAGAGCTACCAGGCGCTCGTCGACGGCGCCGTGCTGTCGGTCAAGCGCGCGCACGACAGCCTG CAGGAGGGCCACCTGGACGTGGGCACGACGACCATCGCCGACGGCGCCATCAACCGCTCCCTCTTCGCCTACCTG GCCAACCCGGCGGCGGAGCGGGAGCGGTACGGCGCGGCGACGACGGACACGACGATGACGCTGCTGCGCCTGCGC CGCGCCTCGGACGGCCGCAGCATCGGCGTCCTCAGCTGGTTCCCCGTCCACGGCACCTCGCTGCTCGGCAACCAC ACGCACGCGGCCGCCGACAACAAGGGCGTCGCCGCCTGGATGCTGGAGGAGGCGATGCGCGGCCACGCCTCGGCC GCGCCCGGCTTCGTCGCCGGCTTCAGCCAGGCCAACGTCGGCGACACGACGCCCAACGTCCTCGGCGCCTACTGC GACGACGGCTCCGGCCAGCCCTGCAGCCTCGAGCGCAGCACCTGCGCCGACGGCAAGTCGCAGAGCTGCCACGGC CGCGGGCCCGAGTTCCGCGCCCTCGACCTCGGCGTCCGCAGCTGCCACGAGATGGGCCGGCGCCAGTTTGCCGGC GCCAAGAAGATTTATGTGACCCGCTGA
Transcript	>Hirsu2\|7981 ATGGACCGGTGGCGCGGACCGGTCGTCTTCGGCCGCCTCGTCGGCCTCGTCGCCCTGTGGCTCTGGGCCGCCGGG GCCGCCGGGGCCGGGCGCGGAGACCGATACCTGGTCGGGGTCGGCAAGGCGGACATCACGGGCCCCGTGGTCGAG GTCGGCTTCGCCGGCTATGCCAACACGGAGCAGGTGGGCACGGGCCTGCGGCAGCGGCTGCACAGCCGGGCGTTC GTGGTGGCGGACCCGGAGCGGCCGCGCGACCGGTTCGTCTACCTGGTGCTGGACGCGCAGTCGGGCGACACGGCG GTGCGCAACGGCGTGCTGGACGGGCTGCGGGCGCTGGGCGGCGACTACGCCGAGCTGTACGGCGACGCCAACGTG GCCCTGACGGGCACGCACAGCCACGCCGGGCCGGGCGCCTGGTTCAACTACCTGCTGCCGCAGATCACGACGCTC GGCTTCGACCGGCAGAGCTACCAGGCGCTCGTCGACGGCGCCGTGCTGTCGGTCAAGCGCGCGCACGACAGCCTG CAGGAGGGCCACCTGGACGTGGGCACGACGACCATCGCCGACGGCGCCATCAACCGCTCCCTCTTCGCCTACCTG GCCAACCCGGCGGCGGAGCGGGAGCGGTACGGCGCGGCGACGACGGACACGACGATGACGCTGCTGCGCCTGCGC CGCGCCTCGGACGGCCGCAGCATCGGCGTCCTCAGCTGGTTCCCCGTCCACGGCACCTCGCTGCTCGGCAACCAC ACGCACGCGGCCGCCGACAACAAGGGCGTCGCCGCCTGGATGCTGGAGGAGGCGATGCGCGGCCACGCCTCGGCC GCGCCCGGCTTCGTCGCCGGCTTCAGCCAGGCCAACGTCGGCGACACGACGCCCAACGTCCTCGGCGCCTACTGC GACGACGGCTCCGGCCAGCCCTGCAGCCTCGAGCGCAGCACCTGCGCCGACGGCAAGTCGCAGAGCTGCCACGGC CGCGGGCCCGAGTTCCGCGCCCTCGACCTCGGCGTCCGCAGCTGCCACGAGATGGGCCGGCGCCAGTTTGCCGGC GCCAAGAAGATTTATGTGACCCGCTGA
Gene	>Hirsu2\|7981 ATGGACCGGTGGCGCGGACCGGTCGTCTTCGGCCGCCTCGTCGGCCTCGTCGCCCTGTGGCTCTGGGCCGCCGGG GCCGCCGGGGCCGGGCGCGGAGACCGATACCTGGTCGGGGTCGGCAAGGCGGACATCACGGGCCCCGTGGTCGAG GTCGGCTTCGCCGGCTATGCCAACACGGAGCAGGTGGGCACGGGCCTGCGGCAGCGGCTGCACAGCCGGGCGTTC GTGGTGGCGGACCCGGAGCGGCCGCGCGACCGGTTCGTCTACCTGGTGCTGGACGCGCAGTCGGGCGACACGGCG GTGCGCAACGGCGTGCTGGACGGGCTGCGGGCGCTGGGCGGCGACTACGCCGAGCTGTACGGCGACGCCAACGTG GCCCTGACGGGCACGCACAGCCACGCCGGGCCGGGCGCCTGGTTCAACTACCTGCTGCCGCAGATCACGACGCTC GGCTTCGACCGGCAGAGCTACCAGGCGCTCGTCGACGGCGCCGTGCTGTCGGTCAAGCGCGCGCACGACAGCCTG CAGGAGGGCCACCTGGACGTGGGCACGACGACCATCGCCGACGGCGCCATCAACCGCTCCCTCTTCGCCTACCTG GCCAACCCGGCGGCGGAGCGGGAGCGGTACGGCGCGGCGACGACGGACACGACGATGACGCTGCTGCGCCTGCGC CGCGCCTCGGACGGCCGCAGCATCGGCGTCCTCAGCTGGTTCCCCGTCCACGGCACCTCGCTGCTCGGCAACCAC ACGCACGCGGCCGCCGACAACAAGGGCGTCGCCGCCTGGATGCTGGAGGAGGCGATGCGCGGCCACGCCTCGGCC GCGCCCGGCTTCGTCGCCGGCTTCAGCCAGGCCAACGTCGGCGACACGACGCCCAACGTCCTCGGCGCCTACTGC GACGACGGCTCCGGCCAGCCCTGCAGCCTCGAGCGCAGCACCTGCGCCGACGGCAAGTCGCAGAGCTGCCACGGC CGCGGGCCCGAGTTCCGCGCCCTCGACCTCGGCGTCCGCAGCTGCCACGAGATGGGCCGGCGCCAGTTTGCCGGC GCCAAGAAGATTTATGTGAGTTTCCCCCCCCCCCGCCGTCGTCGACGCGTATATATACATACACCCCAATACATC AAATCAAGCCCGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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