Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7965
Gene name
LocationContig_494:3068..4651
Strand-
Gene length (bp)1583
Transcript length (bp)1521
Coding sequence length (bp)1521
Protein length (aa) 507

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05236 TAF4 Transcription initiation factor TFIID component TAF4 family 2.9E-26 206 497

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005669 transcription factor TFIID complex Yes
GO:0006352 DNA-templated transcription, initiation Yes
GO:0044428 nuclear part No
GO:0006139 nucleobase-containing compound metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0044237 cellular metabolic process No
GO:0043170 macromolecule metabolic process No
GO:0016070 RNA metabolic process No
GO:0032774 RNA biosynthetic process No
GO:0071704 organic substance metabolic process No
GO:1901576 organic substance biosynthetic process No
GO:0006807 nitrogen compound metabolic process No
GO:0044238 primary metabolic process No
GO:0005667 transcription factor complex No
GO:0008152 metabolic process No
GO:0008150 biological_process No
GO:0046483 heterocycle metabolic process No
GO:0044422 organelle part No
GO:0005575 cellular_component No
GO:0044424 intracellular part No
GO:0019438 aromatic compound biosynthetic process No
GO:0009987 cellular process No
GO:0044451 nucleoplasm part No
GO:0018130 heterocycle biosynthetic process No
GO:0044798 nuclear transcription factor complex No
GO:0032991 protein-containing complex No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0090575 RNA polymerase II transcription factor complex No
GO:0044446 intracellular organelle part No
GO:0009059 macromolecule biosynthetic process No
GO:0044249 cellular biosynthetic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0090304 nucleic acid metabolic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0009058 biosynthetic process No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0044464 cell part No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7965
MALIAPSTVSPAPPPNIMGPPQRPAERPTKDYEYDVTDSLAGTGIDLRAEEQYMSELYSNVLDTNSDARTGFAHH
PAGSKSSFYGAGSANQPPGSATAPSQDQLAAKAAEQAWVESSARLASQRTQEINDPFLLVALVHKRAEKITREHN
LGLNLDMKNPSQPMGKMRPPEQFPVPKVTVRMQPGPDSTMVQTTGSFIPHDSYLVDQLALMSIATKHRLRELVEE
ADVVAVNRQRTSHGDIPEDWAAAAAPMNMELLEPMEITGSNPAESGGRPETEAGSPKRSADCAKLGEGATAPVKK
CPKVSSSMTVSMRDRARQEREWEEARLRKRQRRKDGAAEGGGTASRSGSVAPGTPGSVAPEPEKAMTKKEMKKNQ
ALKAAEANSHANQNITSSMFAGLGGKGGLFGKKKTGKTYDWMNVGRSGSGASTPSRATPGPKGANGTSSSMGAAS
HALTTEGRNRLGTWREDKEKGKMIQLRDWVSVLERDGRESKALSRAYVRLDASHPK*
Coding >Hirsu2|7965
ATGGCTCTCATCGCACCGTCCACCGTCTCGCCGGCGCCCCCCCCAAACATCATGGGCCCGCCGCAGCGTCCGGCA
GAGAGGCCCACGAAGGACTACGAGTATGACGTGACGGATTCTTTGGCCGGCACAGGAATCGACCTACGCGCAGAG
GAGCAATATATGTCGGAGTTGTACTCGAATGTGCTCGATACGAACTCAGATGCCAGAACAGGCTTCGCCCACCAC
CCGGCTGGAAGCAAGTCCTCCTTCTACGGTGCTGGATCAGCCAACCAGCCTCCCGGCTCGGCCACGGCGCCTAGC
CAAGATCAGCTGGCCGCCAAGGCGGCCGAGCAGGCTTGGGTCGAGTCCTCGGCCCGTCTGGCCTCCCAGAGAACG
CAGGAGATCAACGACCCGTTCCTTCTGGTTGCGTTGGTCCACAAGCGCGCAGAGAAAATCACACGGGAACATAAC
CTGGGTCTCAACCTGGACATGAAGAACCCCAGCCAGCCCATGGGCAAAATGCGGCCGCCCGAGCAGTTTCCTGTC
CCTAAGGTCACAGTCCGTATGCAGCCGGGGCCCGATTCGACCATGGTTCAAACGACGGGGTCATTTATTCCTCAT
GATTCCTACCTTGTCGACCAGCTTGCCCTCATGTCTATCGCCACAAAGCACCGACTTCGCGAGCTCGTCGAGGAG
GCAGACGTCGTCGCGGTCAACAGACAGAGAACATCCCACGGGGATATACCCGAGGACTGGGCGGCAGCTGCGGCT
CCGATGAACATGGAGCTCTTGGAGCCTATGGAAATCACCGGTAGTAACCCGGCGGAGTCGGGCGGGAGGCCTGAG
ACCGAGGCGGGATCGCCGAAGCGTTCCGCCGATTGTGCCAAGCTTGGTGAAGGCGCCACGGCGCCGGTCAAGAAG
TGTCCCAAAGTCTCGTCGAGCATGACAGTGTCGATGAGAGACAGAGCTCGCCAGGAGCGGGAGTGGGAAGAGGCC
CGCCTGCGGAAACGCCAACGGCGCAAGGACGGGGCCGCTGAAGGAGGCGGCACAGCGTCGCGGTCGGGGAGCGTC
GCACCCGGGACACCAGGATCCGTGGCACCCGAGCCAGAAAAGGCGATGACGAAGAAGGAAATGAAGAAGAACCAG
GCTCTCAAAGCCGCCGAGGCGAACAGCCACGCTAACCAGAACATAACAAGCAGCATGTTCGCGGGTCTGGGGGGC
AAGGGTGGCCTGTTCGGCAAGAAGAAGACGGGCAAGACGTACGATTGGATGAACGTCGGACGGAGCGGAAGCGGA
GCCAGCACGCCGTCCAGGGCGACGCCGGGGCCCAAGGGTGCGAACGGAACGTCGAGCTCTATGGGCGCGGCCAGC
CATGCGCTCACGACCGAGGGACGAAATCGGCTGGGCACATGGCGGGAGGACAAGGAAAAGGGAAAGATGATCCAG
TTGCGAGACTGGGTCAGCGTTCTGGAAAGGGATGGCAGGGAGTCCAAAGCGCTTTCGAGAGCGTACGTTCGGCTG
GACGCCTCGCATCCCAAGTGA
Transcript >Hirsu2|7965
ATGGCTCTCATCGCACCGTCCACCGTCTCGCCGGCGCCCCCCCCAAACATCATGGGCCCGCCGCAGCGTCCGGCA
GAGAGGCCCACGAAGGACTACGAGTATGACGTGACGGATTCTTTGGCCGGCACAGGAATCGACCTACGCGCAGAG
GAGCAATATATGTCGGAGTTGTACTCGAATGTGCTCGATACGAACTCAGATGCCAGAACAGGCTTCGCCCACCAC
CCGGCTGGAAGCAAGTCCTCCTTCTACGGTGCTGGATCAGCCAACCAGCCTCCCGGCTCGGCCACGGCGCCTAGC
CAAGATCAGCTGGCCGCCAAGGCGGCCGAGCAGGCTTGGGTCGAGTCCTCGGCCCGTCTGGCCTCCCAGAGAACG
CAGGAGATCAACGACCCGTTCCTTCTGGTTGCGTTGGTCCACAAGCGCGCAGAGAAAATCACACGGGAACATAAC
CTGGGTCTCAACCTGGACATGAAGAACCCCAGCCAGCCCATGGGCAAAATGCGGCCGCCCGAGCAGTTTCCTGTC
CCTAAGGTCACAGTCCGTATGCAGCCGGGGCCCGATTCGACCATGGTTCAAACGACGGGGTCATTTATTCCTCAT
GATTCCTACCTTGTCGACCAGCTTGCCCTCATGTCTATCGCCACAAAGCACCGACTTCGCGAGCTCGTCGAGGAG
GCAGACGTCGTCGCGGTCAACAGACAGAGAACATCCCACGGGGATATACCCGAGGACTGGGCGGCAGCTGCGGCT
CCGATGAACATGGAGCTCTTGGAGCCTATGGAAATCACCGGTAGTAACCCGGCGGAGTCGGGCGGGAGGCCTGAG
ACCGAGGCGGGATCGCCGAAGCGTTCCGCCGATTGTGCCAAGCTTGGTGAAGGCGCCACGGCGCCGGTCAAGAAG
TGTCCCAAAGTCTCGTCGAGCATGACAGTGTCGATGAGAGACAGAGCTCGCCAGGAGCGGGAGTGGGAAGAGGCC
CGCCTGCGGAAACGCCAACGGCGCAAGGACGGGGCCGCTGAAGGAGGCGGCACAGCGTCGCGGTCGGGGAGCGTC
GCACCCGGGACACCAGGATCCGTGGCACCCGAGCCAGAAAAGGCGATGACGAAGAAGGAAATGAAGAAGAACCAG
GCTCTCAAAGCCGCCGAGGCGAACAGCCACGCTAACCAGAACATAACAAGCAGCATGTTCGCGGGTCTGGGGGGC
AAGGGTGGCCTGTTCGGCAAGAAGAAGACGGGCAAGACGTACGATTGGATGAACGTCGGACGGAGCGGAAGCGGA
GCCAGCACGCCGTCCAGGGCGACGCCGGGGCCCAAGGGTGCGAACGGAACGTCGAGCTCTATGGGCGCGGCCAGC
CATGCGCTCACGACCGAGGGACGAAATCGGCTGGGCACATGGCGGGAGGACAAGGAAAAGGGAAAGATGATCCAG
TTGCGAGACTGGGTCAGCGTTCTGGAAAGGGATGGCAGGGAGTCCAAAGCGCTTTCGAGAGCGTACGTTCGGCTG
GACGCCTCGCATCCCAAGTGA
Gene >Hirsu2|7965
ATGGCTCTCATCGCACCGTCCACCGTCTCGCCGGCGCCCCCCCCAAACATCATGGGCCCGCCGCAGCGTCCGGCA
GAGAGGCCCACGAAGGACTACGAGTATGACGTGACGGATTCTTTGGCCGGCACAGGAATCGACCTACGCGCAGAG
GAGCAATATATGTCGGAGTTGTACTCGAATGTGCTCGATACGAACTCAGATGCCAGAACAGGCTTCGCCCACCAC
CCGGCTGGAAGCAAGTCCTCCTTCTACGGTGCTGGATCAGCCAACCAGCCTCCCGGCTCGGCCACGGCGCCTAGC
CAAGATCAGCTGGCCGCCAAGGCGGCCGAGCAGGCTTGGGTCGAGTCCTCGGCCCGTCTGGCCTCCCAGAGAACG
CAGGAGATCAACGACCCGTTCCTTCTGGTTGCGTTGGTCCACAAGCGCGCAGAGAAAATCACACGGGAACATAAC
CTGGGTCTCAACCTGGACATGAAGAACCCCAGCCAGCCCATGGGCAAAATGCGGCCGCCCGAGCAGTTTCCTGTC
CCTAAGGTCACAGTCCGTATGCAGCCGGGGCCCGATTCGACCATGGTTCAAACGACGGGGTCATTTATTCCTCAT
GATTCCTACCTTGTCGACCAGCTTGCCCTCATGTCTATCGCCACAAAGCACCGACTTCGCGAGCTCGTCGAGGAG
GCAGACGTCGTCGCGGTCAACAGACAGAGAACATCCCACGGGGATATACCCGAGGACTGGGCGGCAGCTGCGGCT
CCGATGAACATGGAGCTCTTGGAGCCTATGGAAATCACCGGTAGTAACCCGGCGGAGTCGGGCGGGAGGCCTGAG
ACCGAGGCGGGATCGCCGAAGCGTGAGCTACCAGTGACACCCCCCAAACGTCCCGTGCTGTTTATCTAACCACCT
GACTTTTAGGTTCCGCCGATTGTGCCAAGCTTGGTGAAGGCGCCACGGCGCCGGTCAAGAAGTGTCCCAAAGTCT
CGTCGAGCATGACAGTGTCGATGAGAGACAGAGCTCGCCAGGAGCGGGAGTGGGAAGAGGCCCGCCTGCGGAAAC
GCCAACGGCGCAAGGACGGGGCCGCTGAAGGAGGCGGCACAGCGTCGCGGTCGGGGAGCGTCGCACCCGGGACAC
CAGGATCCGTGGCACCCGAGCCAGAAAAGGCGATGACGAAGAAGGAAATGAAGAAGAACCAGGCTCTCAAAGCCG
CCGAGGCGAACAGCCACGCTAACCAGAACATAACAAGCAGCATGTTCGCGGGTCTGGGGGGCAAGGGTGGCCTGT
TCGGCAAGAAGAAGACGGGCAAGACGTACGATTGGATGAACGTCGGACGGAGCGGAAGCGGAGCCAGCACGCCGT
CCAGGGCGACGCCGGGGCCCAAGGGTGCGAACGGAACGTCGAGCTCTATGGGCGCGGCCAGCCATGCGCTCACGA
CCGAGGGACGAAATCGGCTGGGCACATGGCGGGAGGACAAGGAAAAGGGAAAGATGATCCAGTTGCGAGACTGGG
TCAGCGTTCTGGAAAGGGATGGCAGGGAGTCCAAAGCGCTTTCGAGAGCGTACGTTCGGCTGGACGCCTCGCATC
CCAAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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