Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7962
Gene name
LocationContig_493:12603..14966
Strand+
Gene length (bp)2363
Transcript length (bp)1953
Coding sequence length (bp)1953
Protein length (aa) 651

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 5.8E-10 16 47
PF04082 Fungal_trans Fungal specific transcription factor domain 2.8E-09 295 377

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P39529|YJU6_YEAST Putative transcriptional regulatory protein YJL206C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YJL206C PE=2 SV=1 10 440 9.0E-11
sp|Q10086|YAO7_SCHPO Uncharacterized transcriptional regulatory protein C11D3.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.07c PE=3 SV=3 326 584 5.0E-09
sp|Q9C0Z1|YKM1_SCHPO Uncharacterized transcriptional regulatory protein PB24D3.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB24D3.01 PE=3 SV=2 326 551 1.0E-07

GO

GO Term Description Terminal node
GO:0005634 nucleus Yes
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0008270 zinc ion binding Yes
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0006351 transcription, DNA-templated Yes
GO:0003677 DNA binding Yes
GO:0031326 regulation of cellular biosynthetic process No
GO:0019438 aromatic compound biosynthetic process No
GO:0043227 membrane-bounded organelle No
GO:0009987 cellular process No
GO:1901363 heterocyclic compound binding No
GO:2001141 regulation of RNA biosynthetic process No
GO:0043167 ion binding No
GO:0018130 heterocycle biosynthetic process No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0044424 intracellular part No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0034645 cellular macromolecule biosynthetic process No
GO:0009059 macromolecule biosynthetic process No
GO:0044249 cellular biosynthetic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0090304 nucleic acid metabolic process No
GO:0050789 regulation of biological process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0009058 biosynthetic process No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:0044464 cell part No
GO:1901576 organic substance biosynthetic process No
GO:0043231 intracellular membrane-bounded organelle No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0080090 regulation of primary metabolic process No
GO:2000112 regulation of cellular macromolecule biosynthetic process No
GO:0140110 transcription regulator activity No
GO:0003700 DNA-binding transcription factor activity No
GO:0006139 nucleobase-containing compound metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0046914 transition metal ion binding No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0043229 intracellular organelle No
GO:0097659 nucleic acid-templated transcription No
GO:0031323 regulation of cellular metabolic process No
GO:0065007 biological regulation No
GO:0044237 cellular metabolic process No
GO:0043170 macromolecule metabolic process No
GO:0097159 organic cyclic compound binding No
GO:0010468 regulation of gene expression No
GO:0016070 RNA metabolic process No
GO:0003676 nucleic acid binding No
GO:0032774 RNA biosynthetic process No
GO:0071704 organic substance metabolic process No
GO:0019222 regulation of metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0050794 regulation of cellular process No
GO:0005488 binding No
GO:0044238 primary metabolic process No
GO:0046872 metal ion binding No
GO:0008152 metabolic process No
GO:0043169 cation binding No
GO:0008150 biological_process No
GO:0051252 regulation of RNA metabolic process No
GO:0044260 cellular macromolecule metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0009889 regulation of biosynthetic process No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0043226 organelle No
GO:0003674 molecular_function No
GO:0005575 cellular_component No
GO:0060255 regulation of macromolecule metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 519 541 22

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7962
MSGPRSGTGTSGVIPRACQNCRLRKIRCNRETPCSNCLTSNIACQSIGEPGAKRMVAASKASDNSSSEIAALHRR
LASLEQKLEKALAQDAASQTPSDEKPRGSQRIEPTRHVPRANRSIPVQGDSSFDRQAYLASQIPELVSPEAAASP
SVADELEALRDAIRKPMPPDGPVSERQGQARLQLELVPSEFVLRLLRELRGSPSLLFLSQPVQDPSQLESLCQRI
YFPINPLSIGELTVFHGMLYFAMQDMESSMQSAIKPGEVDRYRSICWANFQAGMDSHELAAIPTYENTLALTLAA
LDSQLKGNKILQWNLISAAAKHCLALGYHRDDTSCQLSSPEQEARKRLFWHIFMSDSSLSLSMGRAPIIQGFDVD
APPLTVSEDPRRKPWDAAFVTFVRFAVIQASIYRKLYSPRSRRAGAAERQRIVAALAANLGQWYADWQQIDCSDA
HHGHIFQAIFSGADVTYYSVLTLLHRGATPSNAPADISAECFKAAKQGLEAHLESYPRAMIMGPCAVSMYAVWIL
LFTSLTPYIVTFLHCIASSDSADLALLGKVLESIEEMVSTAEGCKRQYELCKALHRIAEAFIESLSTQADRDAPQ
LDRALNLSLLNPLVDDCEWNYFQSSLEEWNGQPLNPDSFTLGSRLDSHTN*
Coding >Hirsu2|7962
ATGTCGGGCCCGCGTTCCGGCACCGGGACAAGCGGCGTCATCCCGAGAGCATGCCAAAACTGCCGCTTGCGCAAG
ATACGATGCAATCGAGAGACGCCCTGCTCGAACTGCCTCACGTCGAACATTGCCTGCCAATCGATTGGAGAGCCA
GGAGCGAAGCGTATGGTCGCCGCGAGCAAGGCATCCGACAACAGCAGCAGCGAAATAGCAGCGCTCCATCGGCGC
CTCGCCAGCCTAGAGCAGAAGCTCGAGAAGGCCTTGGCACAGGATGCGGCCAGCCAGACGCCGTCGGACGAGAAG
CCCCGAGGCTCCCAGCGCATCGAGCCAACGCGCCACGTGCCGCGCGCCAATCGCTCCATACCCGTCCAGGGGGAT
TCTTCCTTCGACCGCCAGGCCTACCTGGCCAGCCAAATCCCAGAGCTCGTCTCGCCCGAGGCGGCGGCTTCGCCC
AGCGTTGCCGACGAGCTCGAGGCGCTGCGGGACGCGATACGGAAGCCGATGCCACCGGACGGACCAGTGAGCGAG
AGACAAGGCCAGGCTCGGCTTCAGCTGGAGCTTGTGCCGTCCGAATTCGTCCTCCGACTGCTGAGGGAGCTACGG
GGATCGCCGTCGCTCTTGTTCTTGAGTCAGCCCGTGCAAGACCCGTCCCAGCTTGAGAGCCTCTGCCAGCGCATC
TATTTCCCCATCAACCCTCTCTCCATTGGCGAGTTGACCGTCTTCCACGGTATGCTCTACTTTGCTATGCAGGAC
ATGGAGTCCAGCATGCAGTCCGCCATCAAACCCGGAGAAGTCGATCGTTACCGCAGCATATGCTGGGCCAACTTT
CAGGCAGGCATGGATTCGCACGAACTCGCGGCCATCCCCACTTATGAGAACACGCTGGCTTTAACCTTGGCGGCA
CTTGACTCGCAGCTCAAGGGCAACAAGATACTTCAGTGGAACCTCATCTCGGCTGCGGCGAAACATTGCCTAGCC
CTGGGCTATCACCGCGACGACACTTCTTGCCAATTGTCCTCGCCCGAGCAGGAGGCCCGAAAGCGGCTTTTCTGG
CACATCTTCATGTCCGATTCCAGCTTGTCGCTGTCTATGGGCCGGGCGCCGATCATACAGGGCTTTGATGTGGAT
GCGCCACCGCTGACCGTGTCCGAGGACCCGAGGCGGAAGCCCTGGGACGCAGCCTTCGTCACCTTTGTTCGCTTC
GCCGTCATTCAAGCGAGCATTTACAGGAAGCTCTACTCGCCCAGGTCCCGCCGGGCCGGAGCCGCCGAGAGACAG
CGCATAGTTGCTGCTCTCGCCGCCAACCTGGGGCAGTGGTATGCCGACTGGCAGCAGATCGACTGCTCGGATGCC
CACCACGGCCACATCTTCCAGGCCATCTTCTCGGGCGCAGACGTCACCTACTATTCCGTTCTGACCCTTCTTCAT
CGCGGTGCGACGCCTTCCAATGCCCCGGCCGACATCTCGGCCGAGTGCTTCAAGGCGGCTAAGCAGGGGCTCGAG
GCTCATCTCGAGTCGTACCCTCGAGCCATGATCATGGGGCCTTGCGCCGTGTCCATGTATGCTGTCTGGATCCTC
CTATTCACGTCGCTCACGCCGTACATCGTCACCTTTCTGCATTGCATTGCGTCGTCGGATTCGGCCGACCTGGCT
CTTCTCGGAAAGGTCCTGGAGTCCATTGAAGAGATGGTATCGACTGCTGAAGGATGCAAGAGACAGTACGAGCTG
TGCAAGGCGCTTCATCGCATTGCCGAGGCCTTCATCGAGTCACTCTCTACCCAAGCTGACAGAGACGCGCCTCAG
CTCGACAGGGCCCTCAATTTATCGCTCTTGAATCCTCTCGTTGACGATTGCGAATGGAACTATTTCCAATCTTCT
CTGGAAGAATGGAACGGCCAACCGCTCAACCCAGACTCGTTTACGCTAGGGAGCCGTCTGGACAGCCACACGAAC
TAG
Transcript >Hirsu2|7962
ATGTCGGGCCCGCGTTCCGGCACCGGGACAAGCGGCGTCATCCCGAGAGCATGCCAAAACTGCCGCTTGCGCAAG
ATACGATGCAATCGAGAGACGCCCTGCTCGAACTGCCTCACGTCGAACATTGCCTGCCAATCGATTGGAGAGCCA
GGAGCGAAGCGTATGGTCGCCGCGAGCAAGGCATCCGACAACAGCAGCAGCGAAATAGCAGCGCTCCATCGGCGC
CTCGCCAGCCTAGAGCAGAAGCTCGAGAAGGCCTTGGCACAGGATGCGGCCAGCCAGACGCCGTCGGACGAGAAG
CCCCGAGGCTCCCAGCGCATCGAGCCAACGCGCCACGTGCCGCGCGCCAATCGCTCCATACCCGTCCAGGGGGAT
TCTTCCTTCGACCGCCAGGCCTACCTGGCCAGCCAAATCCCAGAGCTCGTCTCGCCCGAGGCGGCGGCTTCGCCC
AGCGTTGCCGACGAGCTCGAGGCGCTGCGGGACGCGATACGGAAGCCGATGCCACCGGACGGACCAGTGAGCGAG
AGACAAGGCCAGGCTCGGCTTCAGCTGGAGCTTGTGCCGTCCGAATTCGTCCTCCGACTGCTGAGGGAGCTACGG
GGATCGCCGTCGCTCTTGTTCTTGAGTCAGCCCGTGCAAGACCCGTCCCAGCTTGAGAGCCTCTGCCAGCGCATC
TATTTCCCCATCAACCCTCTCTCCATTGGCGAGTTGACCGTCTTCCACGGTATGCTCTACTTTGCTATGCAGGAC
ATGGAGTCCAGCATGCAGTCCGCCATCAAACCCGGAGAAGTCGATCGTTACCGCAGCATATGCTGGGCCAACTTT
CAGGCAGGCATGGATTCGCACGAACTCGCGGCCATCCCCACTTATGAGAACACGCTGGCTTTAACCTTGGCGGCA
CTTGACTCGCAGCTCAAGGGCAACAAGATACTTCAGTGGAACCTCATCTCGGCTGCGGCGAAACATTGCCTAGCC
CTGGGCTATCACCGCGACGACACTTCTTGCCAATTGTCCTCGCCCGAGCAGGAGGCCCGAAAGCGGCTTTTCTGG
CACATCTTCATGTCCGATTCCAGCTTGTCGCTGTCTATGGGCCGGGCGCCGATCATACAGGGCTTTGATGTGGAT
GCGCCACCGCTGACCGTGTCCGAGGACCCGAGGCGGAAGCCCTGGGACGCAGCCTTCGTCACCTTTGTTCGCTTC
GCCGTCATTCAAGCGAGCATTTACAGGAAGCTCTACTCGCCCAGGTCCCGCCGGGCCGGAGCCGCCGAGAGACAG
CGCATAGTTGCTGCTCTCGCCGCCAACCTGGGGCAGTGGTATGCCGACTGGCAGCAGATCGACTGCTCGGATGCC
CACCACGGCCACATCTTCCAGGCCATCTTCTCGGGCGCAGACGTCACCTACTATTCCGTTCTGACCCTTCTTCAT
CGCGGTGCGACGCCTTCCAATGCCCCGGCCGACATCTCGGCCGAGTGCTTCAAGGCGGCTAAGCAGGGGCTCGAG
GCTCATCTCGAGTCGTACCCTCGAGCCATGATCATGGGGCCTTGCGCCGTGTCCATGTATGCTGTCTGGATCCTC
CTATTCACGTCGCTCACGCCGTACATCGTCACCTTTCTGCATTGCATTGCGTCGTCGGATTCGGCCGACCTGGCT
CTTCTCGGAAAGGTCCTGGAGTCCATTGAAGAGATGGTATCGACTGCTGAAGGATGCAAGAGACAGTACGAGCTG
TGCAAGGCGCTTCATCGCATTGCCGAGGCCTTCATCGAGTCACTCTCTACCCAAGCTGACAGAGACGCGCCTCAG
CTCGACAGGGCCCTCAATTTATCGCTCTTGAATCCTCTCGTTGACGATTGCGAATGGAACTATTTCCAATCTTCT
CTGGAAGAATGGAACGGCCAACCGCTCAACCCAGACTCGTTTACGCTAGGGAGCCGTCTGGACAGCCACACGAAC
TAG
Gene >Hirsu2|7962
ATGTCGGGCCCGCGTTCCGGCACCGGGACAAGCGGCGTCATCCCGAGAGCAGTAAGCCGAGCTGCCGGCCTTCCA
TCCGCCAAGAGGCGTCCTTGGAGCGTTGCAGTCGACGTTGCTGATCGGCTCGTCCAGTGCCAAAACTGCCGCTTG
CGCAAGGTCAGACGCCGCAGCAGCTGACAGCATGGCCGGCTGGGCTAAACACCGATGAGCCGTCCTTCAGATACG
ATGCAATCGAGAGACGCCCTGCTCGAACTGCCTCACGTCGAACATTGCCTGCCAATCGATTGGAGAGCCAGGAGC
GAAGCGTATGGTCGCCGCGAGCAAGGCATCCGACAACAGGCAAGTACCCGGATCCGATCCTCGGCCGCCCGCCCG
CCCTATGCTGCAACTAACTGGCGCCCGACGCCGCAGCAGCAGCGAAATAGCAGCGCTCCATCGGCGCCTCGCCAG
CCTAGAGCAGAAGCTCGAGAAGGCCTTGGCACAGGATGCGGCCAGCCAGACGCCGTCGGACGAGAAGCCCCGAGG
CTCCCAGCGCATCGAGCCAACGCGCCACGTGCCGCGCGCCAATCGCTCCATACCCGTCCAGGGGGATTCTTCCTT
CGACCGCCAGGCCTACCTGGCCAGCCAAATCCCAGAGCTCGTCTCGCCCGAGGCGGCGGCTTCGCCCAGCGTTGC
CGACGAGCTCGAGGCGCTGCGGGACGCGATACGGAAGCCGATGCCACCGGACGGACCAGTGAGCGAGAGACAAGG
CCAGGCTCGGCTTCAGCTGGAGCTTGTGCCGTCCGAATTCGTCCTCCGACTGCTGAGGGAGCTACGGGGTGAGAT
CGGGCCGTATCACTCCCAACTCGCGCCCGCCGTCGAGCTGAACGTCGCCTAGGATCGCCGTCGCTCTTGTTCTTG
AGTCAGCCCGTGCAAGACCCGTCCCAGCTTGAGAGCCTCTGCCAGCGCATCTATTTCCCCATCAACCCTCTCTCC
ATTGGCGAGTTGACCGTCTTCCACGGTATGCTCTACTTTGCTATGCAGGACATGGAGTCCAGCATGCAGTCCGCC
ATCAAACCCGGAGAAGTCGATCGTTACCGCAGCATATGCTGGGCCAACTTTCAGGCAGGCATGGATTCGCACGAA
CTCGCGGCCATCCCCACTTATGAGAACACGCTGGCTTTAACCTTGGCGGTAGGCTGTTCCATCCACGCTCTCGCA
TATCGTCAGCATGGCTGATGAGCGAAGCTCTCAGGCACTTGACTCGCAGCTCAAGGGCAACAAGATACTTCAGTG
GAACCTCATCTCGGCTGCGGCGAAACATTGCCTAGCCCTGGGCTATCACCGCGACGACACTTCTTGCCAATTGTC
CTCGCCCGAGCAGGAGGCCCGAAAGCGGCTTTTCTGGCACATCTTCATGTCCGATTCCAGCTTGTCGCTGTCTAT
GGGCCGGGCGCCGATCATACAGGGCTTTGATGTGGATGCGCCACCGCTGACCGTGTCCGAGGACCCGAGGCGGAA
GCCCTGGGACGCAGCCTTCGTCACCTTTGTTCGCTTCGCCGTCATTCAAGCGAGCATTTACAGGAAGCTCTACTC
GCCCAGGTCCCGCCGGGCCGGAGCCGCCGAGAGACAGCGCATAGTTGCTGCTCTCGCCGCCAACCTGGGGCAGTG
GTATGCCGACTGGCAGCAGATCGACTGCTCGGATGCCCACCACGGCCACATCTTCCAGGCCATCTTCTCGGGCGC
AGACGTCACCTACTATTCCGTTCTGACCCTTCTTCATCGCGGTGCGACGCCTTCCAATGCCCCGGCCGACATCTC
GGCCGAGTGCTTCAAGGCGGCTAAGCAGGGGCTCGAGGCTCATCTCGAGTCGTACCCTCGAGCCATGATCATGGG
GCCTTGCGCCGTGTCCATGTATGCTGTCTGGTCAGTCCCGCGCCCCGGATAGGCCCACTCCGCGGTTGTTGTATG
TGTTGATAGGATCCTTACCATCTTTTAGGATCCTCCTATTCACGTCGCTCACGCCGTACATCGTCACCTTTCTGC
ATTGCATTGCGTCGTCGGATTCGGCCGACCTGGCTCTTCTCGGAAAGGTCCTGGAGTCCATTGAAGAGATGGTAT
CGACTGCTGAAGGATGCAAGAGACAGTACGAGCTGTGCAAGGCGCTTCATCGCATTGCCGAGGCCTTCATCGAGT
CACTCTCTACCCAAGCTGACAGAGACGCGCCTCAGCTCGACAGGGCCCTCAATTTATCGCTCTTGAATCCTCTCG
TTGACGATTGCGAATGGAACTATTTCCAATCTTCTCTGGAAGAATGGAACGGCCAACCGCTCAACCCAGACTCGT
TTACGCTAGGGAGCCGTCTGGACAGCCACACGAACTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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