Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7959
Gene name
LocationContig_493:6692..8412
Strand+
Gene length (bp)1720
Transcript length (bp)1419
Coding sequence length (bp)1419
Protein length (aa) 473

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01565 FAD_binding_4 FAD binding domain 1.4E-27 48 185
PF08031 BBE Berberine and berberine like 2.4E-13 424 467

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q8GTB6|THCAS_CANSA Tetrahydrocannabinolic acid synthase OS=Cannabis sativa PE=1 SV=1 39 468 8.0E-21
sp|A6P6W0|CASL1_CANSA Cannabidiolic acid synthase-like 1 OS=Cannabis sativa GN=CBDAS2 PE=2 SV=1 18 468 2.0E-20
sp|Q33DQ2|THCAI_CANSA Inactive tetrahydrocannabinolic acid synthase OS=Cannabis sativa PE=3 SV=1 39 468 5.0E-20
sp|A6P6W1|CASL2_CANSA Cannabidiolic acid synthase-like 2 OS=Cannabis sativa GN=CBDAS3 PE=2 SV=1 18 468 6.0E-20
sp|Q9FZC6|FOX3_ARATH Flavin-dependent oxidoreductase FOX3 OS=Arabidopsis thaliana GN=FOX3 PE=3 SV=1 14 469 1.0E-19
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Swissprot ID Swissprot Description Start End E-value
sp|Q8GTB6|THCAS_CANSA Tetrahydrocannabinolic acid synthase OS=Cannabis sativa PE=1 SV=1 39 468 8.0E-21
sp|A6P6W0|CASL1_CANSA Cannabidiolic acid synthase-like 1 OS=Cannabis sativa GN=CBDAS2 PE=2 SV=1 18 468 2.0E-20
sp|Q33DQ2|THCAI_CANSA Inactive tetrahydrocannabinolic acid synthase OS=Cannabis sativa PE=3 SV=1 39 468 5.0E-20
sp|A6P6W1|CASL2_CANSA Cannabidiolic acid synthase-like 2 OS=Cannabis sativa GN=CBDAS3 PE=2 SV=1 18 468 6.0E-20
sp|Q9FZC6|FOX3_ARATH Flavin-dependent oxidoreductase FOX3 OS=Arabidopsis thaliana GN=FOX3 PE=3 SV=1 14 469 1.0E-19
sp|Q796Y5|YGAK_BACSU Uncharacterized FAD-linked oxidoreductase YgaK OS=Bacillus subtilis (strain 168) GN=ygaK PE=3 SV=4 41 468 3.0E-19
sp|Q9FZC8|FOX5_ARATH Flavin-dependent oxidoreductase FOX5 OS=Arabidopsis thaliana GN=FOX5 PE=3 SV=1 49 468 3.0E-18
sp|O06997|YVDP_BACSU Uncharacterized FAD-linked oxidoreductase YvdP OS=Bacillus subtilis (strain 168) GN=yvdP PE=1 SV=1 37 469 1.0E-17
sp|P08159|HDNO_ARTOX 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 47 218 2.0E-17
sp|Q9FZC4|FOX1_ARATH Flavin-dependent oxidoreductase FOX1 OS=Arabidopsis thaliana GN=FOX1 PE=2 SV=1 49 468 5.0E-17
sp|A6P6V9|CBDAS_CANSA Cannabidiolic acid synthase OS=Cannabis sativa GN=CBDAS PE=1 SV=1 39 468 8.0E-17
sp|Q9FZC7|FOX4_ARATH Flavin-dependent oxidoreductase FOX4 OS=Arabidopsis thaliana GN=FOX4 PE=2 SV=1 49 468 9.0E-17
sp|P30986|RETO_ESCCA Reticuline oxidase OS=Eschscholzia californica GN=BBE1 PE=1 SV=1 21 468 2.0E-16
sp|Q54H55|Y8969_DICDI FAD-linked oxidoreductase DDB_G0289697 OS=Dictyostelium discoideum GN=DDB_G0289697 PE=2 SV=1 1 468 2.0E-16
sp|P93479|RETO_PAPSO Reticuline oxidase OS=Papaver somniferum GN=BBE1 PE=2 SV=1 48 471 2.0E-15
sp|Q9FZC5|FOX2_ARATH Flavin-dependent oxidoreductase FOX2 OS=Arabidopsis thaliana GN=FOX2 PE=2 SV=1 49 468 2.0E-15
sp|Q9SVG4|RETOL_ARATH Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2 39 472 6.0E-15
sp|D7UQ40|SOL5_ALTSO Bifunctional solanapyrone synthase OS=Alternaria solani GN=sol5 PE=1 SV=1 5 216 7.0E-14
sp|Q67YU0|CKX5_ARATH Cytokinin dehydrogenase 5 OS=Arabidopsis thaliana GN=CKX5 PE=2 SV=1 42 356 2.0E-13
sp|Q9LTS3|CKX3_ARATH Cytokinin dehydrogenase 3 OS=Arabidopsis thaliana GN=CKX3 PE=1 SV=1 46 356 6.0E-13
sp|Q6Z955|CKX11_ORYSJ Cytokinin dehydrogenase 11 OS=Oryza sativa subsp. japonica GN=CKX11 PE=2 SV=1 44 250 7.0E-13
sp|D4B1Z7|A2478_ARTBC Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02478 PE=1 SV=1 115 460 2.0E-12
sp|Q9FUJ1|CKX7_ARATH Cytokinin dehydrogenase 7 OS=Arabidopsis thaliana GN=CKX7 PE=1 SV=1 46 227 4.0E-12
sp|Q9FUJ3|CKX2_ARATH Cytokinin dehydrogenase 2 OS=Arabidopsis thaliana GN=CKX2 PE=1 SV=2 46 227 1.0E-10
sp|D4B1P2|A2372_ARTBC Uncharacterized FAD-linked oxidoreductase ARB_02372 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02372 PE=1 SV=1 46 217 3.0E-10
sp|Q5Z620|CKX10_ORYSJ Cytokinin dehydrogenase 10 OS=Oryza sativa subsp. japonica GN=CKX10 PE=3 SV=1 48 227 9.0E-09
sp|O22213|CKX1_ARATH Cytokinin dehydrogenase 1 OS=Arabidopsis thaliana GN=CKX1 PE=1 SV=1 38 227 1.0E-08
sp|Q6YW51|CKX6_ORYSJ Cytokinin dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CKX6 PE=3 SV=1 9 237 1.0E-08
sp|Q75K78|CKX9_ORYSJ Cytokinin dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CKX9 PE=2 SV=1 48 237 8.0E-08
sp|P46377|FAS5_RHOFA Uncharacterized oxidoreductase ORF5 in fasciation locus OS=Rhodococcus fascians GN=fas5 PE=2 SV=1 59 224 9.0E-08
sp|Q6YW50|CKX7_ORYSJ Cytokinin dehydrogenase 7 OS=Oryza sativa subsp. japonica GN=CKX7 PE=3 SV=1 44 227 1.0E-07
sp|Q5ZAY9|CKX5_ORYSJ Cytokinin dehydrogenase 5 OS=Oryza sativa subsp. japonica GN=CKX5 PE=2 SV=1 47 230 2.0E-07
sp|P43485|MCRA_STRLA Mitomycin radical oxidase OS=Streptomyces lavendulae GN=mcrA PE=1 SV=2 48 216 2.0E-07
sp|Q9LY71|CKX6_ARATH Cytokinin dehydrogenase 6 OS=Arabidopsis thaliana GN=CKX6 PE=2 SV=2 38 251 3.0E-07
sp|Q3ZC33|GGLO_BOVIN L-gulonolactone oxidase OS=Bos taurus GN=GULO PE=2 SV=3 48 217 1.0E-06
sp|D4AS41|A7056_ARTBC Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07056 PE=1 SV=2 44 251 1.0E-06
sp|Q8HXW0|GGLO_PIG L-gulonolactone oxidase OS=Sus scrofa GN=GULO PE=2 SV=3 48 217 3.0E-06
sp|P58710|GGLO_MOUSE L-gulonolactone oxidase OS=Mus musculus GN=Gulo PE=1 SV=3 48 217 6.0E-06
sp|A3AVP1|CKX8_ORYSJ Cytokinin dehydrogenase 8 OS=Oryza sativa subsp. japonica GN=CKX8 PE=3 SV=1 48 226 9.0E-06
sp|A2XVN3|CKX8_ORYSI Cytokinin dehydrogenase 8 OS=Oryza sativa subsp. indica GN=CKX8 PE=3 SV=1 48 226 9.0E-06
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GO

GO Term Description Terminal node
GO:0016491 oxidoreductase activity Yes
GO:0055114 oxidation-reduction process Yes
GO:0050660 flavin adenine dinucleotide binding Yes
GO:1901265 nucleoside phosphate binding No
GO:0050662 coenzyme binding No
GO:0005488 binding No
GO:0003824 catalytic activity No
GO:0043168 anion binding No
GO:0003674 molecular_function No
GO:0097159 organic cyclic compound binding No
GO:0043167 ion binding No
GO:0000166 nucleotide binding No
GO:0036094 small molecule binding No
GO:0008150 biological_process No
GO:0048037 cofactor binding No
GO:1901363 heterocyclic compound binding No
GO:0008152 metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 26 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7959
MGSGHSSGLATCLDAVCNGRHACVAYPDHLLYQASWVDRYNLDIPVHPIAVTRPSNADDVSGFVKCAAANNVRVQ
AKSGGHSYANYGLGGEDGELVIDLRHLQHFSMDTNTWQATIGAGHRLWDVTHKLHENGKRAVSHGTCPGVGIGGH
ATIGGLGPSSRMWGSCLDHVVEVEVVTADGSIRRASERENADLFFALKGAGAGFGVITEFVMKTHPEPGSVVRYT
YSVNFGRHADMVDVFDQWQALISDPGLDRRFGSEIIMHAFGLVISATFHGTRDEYEASGIPDRIPRGNVSVLLDN
WLGVVGNQAQDAGLWVSEVRSSFTSRSLAFRRDQLLSRDDIVRMMDFLDRTDKGTLVWFLIFDVTGGAIGDVRTD
ATAYAHRDKIMFCQGYAVGIPALTRKTRVFMDGLISTIRETANSTLTTYPGYVDPSLHDAQASYWGPNLPRLTEV
KTKWDPQDVFHNPQSVRPSGKD*
Coding >Hirsu2|7959
ATGGGCAGCGGGCACAGCTCCGGGCTGGCGACGTGCCTCGACGCCGTCTGCAACGGCCGCCACGCCTGTGTCGCA
TACCCGGACCACCTTCTCTACCAGGCCTCCTGGGTTGACCGGTACAATCTCGACATCCCCGTGCATCCGATTGCC
GTGACGAGGCCCAGCAATGCCGACGACGTGTCCGGCTTTGTCAAGTGCGCGGCCGCCAACAACGTCAGGGTCCAA
GCCAAGTCCGGCGGCCACTCGTATGCCAACTATGGACTGGGAGGAGAGGACGGCGAGCTCGTCATCGACCTGCGC
CATCTCCAACACTTCTCCATGGACACCAACACGTGGCAGGCCACCATCGGCGCCGGCCACCGCCTATGGGACGTC
ACCCACAAGCTGCATGAGAACGGCAAACGGGCCGTCTCCCACGGGACATGTCCCGGGGTCGGCATCGGCGGCCAC
GCCACCATCGGAGGCCTGGGCCCGTCTTCCAGGATGTGGGGGTCGTGCCTTGACCACGTTGTCGAGGTCGAGGTC
GTGACGGCGGACGGGAGCATCCGGCGCGCGAGCGAGCGGGAGAACGCCGACCTGTTCTTCGCTCTCAAGGGCGCC
GGGGCCGGCTTCGGCGTCATCACCGAGTTCGTCATGAAGACGCACCCGGAGCCCGGCAGCGTGGTGCGGTACACG
TACTCGGTCAACTTCGGCCGGCACGCCGACATGGTCGACGTCTTCGACCAGTGGCAGGCCCTCATCTCGGACCCG
GGCCTCGACCGCCGCTTCGGCTCCGAGATCATCATGCACGCCTTCGGCCTCGTCATCTCGGCCACCTTCCACGGC
ACGCGCGACGAGTATGAGGCCAGCGGCATCCCCGACCGCATCCCGCGCGGTAACGTCTCTGTCCTCCTCGACAAC
TGGCTCGGCGTCGTCGGCAACCAGGCCCAGGACGCCGGTCTCTGGGTCTCCGAGGTCCGCAGCAGCTTCACCTCG
CGCAGCCTGGCCTTCCGCAGGGACCAGCTGCTGTCGCGCGACGACATCGTCCGCATGATGGATTTCCTCGACCGC
ACCGACAAGGGCACCTTGGTGTGGTTCCTCATCTTCGACGTCACCGGCGGCGCCATCGGCGACGTCCGCACCGAT
GCCACCGCCTACGCCCACCGCGACAAGATCATGTTCTGCCAGGGCTACGCCGTCGGCATCCCGGCCCTGACGCGC
AAGACCCGTGTCTTCATGGACGGCCTGATCTCGACCATCCGCGAAACGGCCAACTCGACCCTGACCACCTACCCG
GGCTACGTCGACCCGTCCCTGCACGACGCCCAAGCCTCGTACTGGGGGCCCAACTTGCCGAGGCTCACCGAGGTC
AAGACCAAGTGGGATCCGCAAGACGTCTTCCACAACCCGCAGAGCGTGCGCCCGTCCGGCAAGGACTGA
Transcript >Hirsu2|7959
ATGGGCAGCGGGCACAGCTCCGGGCTGGCGACGTGCCTCGACGCCGTCTGCAACGGCCGCCACGCCTGTGTCGCA
TACCCGGACCACCTTCTCTACCAGGCCTCCTGGGTTGACCGGTACAATCTCGACATCCCCGTGCATCCGATTGCC
GTGACGAGGCCCAGCAATGCCGACGACGTGTCCGGCTTTGTCAAGTGCGCGGCCGCCAACAACGTCAGGGTCCAA
GCCAAGTCCGGCGGCCACTCGTATGCCAACTATGGACTGGGAGGAGAGGACGGCGAGCTCGTCATCGACCTGCGC
CATCTCCAACACTTCTCCATGGACACCAACACGTGGCAGGCCACCATCGGCGCCGGCCACCGCCTATGGGACGTC
ACCCACAAGCTGCATGAGAACGGCAAACGGGCCGTCTCCCACGGGACATGTCCCGGGGTCGGCATCGGCGGCCAC
GCCACCATCGGAGGCCTGGGCCCGTCTTCCAGGATGTGGGGGTCGTGCCTTGACCACGTTGTCGAGGTCGAGGTC
GTGACGGCGGACGGGAGCATCCGGCGCGCGAGCGAGCGGGAGAACGCCGACCTGTTCTTCGCTCTCAAGGGCGCC
GGGGCCGGCTTCGGCGTCATCACCGAGTTCGTCATGAAGACGCACCCGGAGCCCGGCAGCGTGGTGCGGTACACG
TACTCGGTCAACTTCGGCCGGCACGCCGACATGGTCGACGTCTTCGACCAGTGGCAGGCCCTCATCTCGGACCCG
GGCCTCGACCGCCGCTTCGGCTCCGAGATCATCATGCACGCCTTCGGCCTCGTCATCTCGGCCACCTTCCACGGC
ACGCGCGACGAGTATGAGGCCAGCGGCATCCCCGACCGCATCCCGCGCGGTAACGTCTCTGTCCTCCTCGACAAC
TGGCTCGGCGTCGTCGGCAACCAGGCCCAGGACGCCGGTCTCTGGGTCTCCGAGGTCCGCAGCAGCTTCACCTCG
CGCAGCCTGGCCTTCCGCAGGGACCAGCTGCTGTCGCGCGACGACATCGTCCGCATGATGGATTTCCTCGACCGC
ACCGACAAGGGCACCTTGGTGTGGTTCCTCATCTTCGACGTCACCGGCGGCGCCATCGGCGACGTCCGCACCGAT
GCCACCGCCTACGCCCACCGCGACAAGATCATGTTCTGCCAGGGCTACGCCGTCGGCATCCCGGCCCTGACGCGC
AAGACCCGTGTCTTCATGGACGGCCTGATCTCGACCATCCGCGAAACGGCCAACTCGACCCTGACCACCTACCCG
GGCTACGTCGACCCGTCCCTGCACGACGCCCAAGCCTCGTACTGGGGGCCCAACTTGCCGAGGCTCACCGAGGTC
AAGACCAAGTGGGATCCGCAAGACGTCTTCCACAACCCGCAGAGCGTGCGCCCGTCCGGCAAGGACTGA
Gene >Hirsu2|7959
ATGGGCAGCGGGCACAGCTCCGGGCTGGCGACGTGCCTCGACGCCGTCTGCAACGGCCGCCACGCCTGTGTCGCA
TACCCGGACCACCTTCTCTACCAGGCCTCCTGGGTTGACCGGTACAATCTCGACATCCCCGTGCATCCGATTGCC
GTGACGAGGCCCAGCAATGCCGACGACGTGTCCGGCTTTGTCAAGTGCGCGGCCGCCAACAACGTCAGGGTCCAA
GCCAAGTCCGGCGGCCACTCGTATGCGTATGTCTCTCTCCGCCCGTATCGTATCCATGACCCCTCGACTCTCGTC
TCCCGGCTTCTGCCTGCCTCGTCGACGTGCTGAGCGCTGACGCGACCACTTCAAGCAACTATGGTGAGTTCGACT
GGGGCTCGCAAGCCTCATCCTGCACACGCCCAACGCTGACGCGCGGGCCGCAGGACTGGGAGGAGAGGACGGCGA
GCTCGTCATCGACCTGCGCCATCTCCAACACTTCTCCATGGACACCAACACGTGGCAGGCCACCATCGGCGCCGG
CCACCGCCTATGGGACGTCACCCACAAGCTGCATGAGAACGGCAAACGGGCCGTCTCCCACGGGACATGTCCCGG
GGTCGGCATCGGCGGCCACGCCACCATCGTGAGTCGCGTTACGGTCTCAGAGGGGGGCCGAGGTCGAGCCGTGCT
GATTCCAGACCCAAAGGGAGGCCTGGGCCCGTCTTCCAGGATGTGGGGGTCGTGCCTTGACCACGTTGTCGAGGT
CGAGGTCGTGACGGCGGACGGGAGCATCCGGCGCGCGAGCGAGCGGGAGAACGCCGACCTGTTCTTCGTAAGTCT
TCGTCTTCTTCACCCGCTCAAGGCCCGTCACACCGGACGGCTGACCCCGGGAGGCGCACAGGCTCTCAAGGGCGC
CGGGGCCGGCTTCGGCGTCATCACCGAGTTCGTCATGAAGACGCACCCGGAGCCCGGCAGCGTGGTGCGGTACAC
GTACTCGGTCAACTTCGGCCGGCACGCCGACATGGTCGACGTCTTCGACCAGTGGCAGGCCCTCATCTCGGACCC
GGGCCTCGACCGCCGCTTCGGCTCCGAGATCATCATGCACGCCTTCGGCCTCGTCATCTCGGCCACCTTCCACGG
CACGCGCGACGAGTATGAGGCCAGCGGCATCCCCGACCGCATCCCGCGCGGTAACGTCTCTGTCCTCCTCGACAA
CTGGCTCGGCGTCGTCGGCAACCAGGCCCAGGACGCCGGTCTCTGGGTCTCCGAGGTCCGCAGCAGCTTCACCTC
GCGCAGCCTGGCCTTCCGCAGGGACCAGCTGCTGTCGCGCGACGACATCGTCCGCATGATGGATTTCCTCGACCG
CACCGACAAGGGCACCTTGGTGTGGTTCCTCATCTTCGACGTCACCGGCGGCGCCATCGGCGACGTCCGCACCGA
TGCCACCGCCTACGCCCACCGCGACAAGATCATGTTCTGCCAGGGCTACGCCGTCGGCATCCCGGCCCTGACGCG
CAAGACCCGTGTCTTCATGGACGGCCTGATCTCGACCATCCGCGAAACGGCCAACTCGACCCTGACCACCTACCC
GGGCTACGTCGACCCGTCCCTGCACGACGCCCAAGCCTCGTACTGGGGGCCCAACTTGCCGAGGCTCACCGAGGT
CAAGACCAAGTGGGATCCGCAAGACGTCTTCCACAACCCGCAGAGCGTGCGCCCGTCCGGCAAGGACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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