© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|7959 |
| Gene name | |
| Location | Contig_493:6692..8412 |
| Strand | + |
| Gene length (bp) | 1720 |
| Transcript length (bp) | 1419 |
| Coding sequence length (bp) | 1419 |
| Protein length (aa) | 473 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01565 | FAD_binding_4 | FAD binding domain | 1.4E-27 | 48 | 185 |
| PF08031 | BBE | Berberine and berberine like | 2.4E-13 | 424 | 467 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q8GTB6|THCAS_CANSA | Tetrahydrocannabinolic acid synthase OS=Cannabis sativa PE=1 SV=1 | 39 | 468 | 8.0E-21 |
| sp|A6P6W0|CASL1_CANSA | Cannabidiolic acid synthase-like 1 OS=Cannabis sativa GN=CBDAS2 PE=2 SV=1 | 18 | 468 | 2.0E-20 |
| sp|Q33DQ2|THCAI_CANSA | Inactive tetrahydrocannabinolic acid synthase OS=Cannabis sativa PE=3 SV=1 | 39 | 468 | 5.0E-20 |
| sp|A6P6W1|CASL2_CANSA | Cannabidiolic acid synthase-like 2 OS=Cannabis sativa GN=CBDAS3 PE=2 SV=1 | 18 | 468 | 6.0E-20 |
| sp|Q9FZC6|FOX3_ARATH | Flavin-dependent oxidoreductase FOX3 OS=Arabidopsis thaliana GN=FOX3 PE=3 SV=1 | 14 | 469 | 1.0E-19 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q8GTB6|THCAS_CANSA | Tetrahydrocannabinolic acid synthase OS=Cannabis sativa PE=1 SV=1 | 39 | 468 | 8.0E-21 |
| sp|A6P6W0|CASL1_CANSA | Cannabidiolic acid synthase-like 1 OS=Cannabis sativa GN=CBDAS2 PE=2 SV=1 | 18 | 468 | 2.0E-20 |
| sp|Q33DQ2|THCAI_CANSA | Inactive tetrahydrocannabinolic acid synthase OS=Cannabis sativa PE=3 SV=1 | 39 | 468 | 5.0E-20 |
| sp|A6P6W1|CASL2_CANSA | Cannabidiolic acid synthase-like 2 OS=Cannabis sativa GN=CBDAS3 PE=2 SV=1 | 18 | 468 | 6.0E-20 |
| sp|Q9FZC6|FOX3_ARATH | Flavin-dependent oxidoreductase FOX3 OS=Arabidopsis thaliana GN=FOX3 PE=3 SV=1 | 14 | 469 | 1.0E-19 |
| sp|Q796Y5|YGAK_BACSU | Uncharacterized FAD-linked oxidoreductase YgaK OS=Bacillus subtilis (strain 168) GN=ygaK PE=3 SV=4 | 41 | 468 | 3.0E-19 |
| sp|Q9FZC8|FOX5_ARATH | Flavin-dependent oxidoreductase FOX5 OS=Arabidopsis thaliana GN=FOX5 PE=3 SV=1 | 49 | 468 | 3.0E-18 |
| sp|O06997|YVDP_BACSU | Uncharacterized FAD-linked oxidoreductase YvdP OS=Bacillus subtilis (strain 168) GN=yvdP PE=1 SV=1 | 37 | 469 | 1.0E-17 |
| sp|P08159|HDNO_ARTOX | 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 | 47 | 218 | 2.0E-17 |
| sp|Q9FZC4|FOX1_ARATH | Flavin-dependent oxidoreductase FOX1 OS=Arabidopsis thaliana GN=FOX1 PE=2 SV=1 | 49 | 468 | 5.0E-17 |
| sp|A6P6V9|CBDAS_CANSA | Cannabidiolic acid synthase OS=Cannabis sativa GN=CBDAS PE=1 SV=1 | 39 | 468 | 8.0E-17 |
| sp|Q9FZC7|FOX4_ARATH | Flavin-dependent oxidoreductase FOX4 OS=Arabidopsis thaliana GN=FOX4 PE=2 SV=1 | 49 | 468 | 9.0E-17 |
| sp|P30986|RETO_ESCCA | Reticuline oxidase OS=Eschscholzia californica GN=BBE1 PE=1 SV=1 | 21 | 468 | 2.0E-16 |
| sp|Q54H55|Y8969_DICDI | FAD-linked oxidoreductase DDB_G0289697 OS=Dictyostelium discoideum GN=DDB_G0289697 PE=2 SV=1 | 1 | 468 | 2.0E-16 |
| sp|P93479|RETO_PAPSO | Reticuline oxidase OS=Papaver somniferum GN=BBE1 PE=2 SV=1 | 48 | 471 | 2.0E-15 |
| sp|Q9FZC5|FOX2_ARATH | Flavin-dependent oxidoreductase FOX2 OS=Arabidopsis thaliana GN=FOX2 PE=2 SV=1 | 49 | 468 | 2.0E-15 |
| sp|Q9SVG4|RETOL_ARATH | Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2 | 39 | 472 | 6.0E-15 |
| sp|D7UQ40|SOL5_ALTSO | Bifunctional solanapyrone synthase OS=Alternaria solani GN=sol5 PE=1 SV=1 | 5 | 216 | 7.0E-14 |
| sp|Q67YU0|CKX5_ARATH | Cytokinin dehydrogenase 5 OS=Arabidopsis thaliana GN=CKX5 PE=2 SV=1 | 42 | 356 | 2.0E-13 |
| sp|Q9LTS3|CKX3_ARATH | Cytokinin dehydrogenase 3 OS=Arabidopsis thaliana GN=CKX3 PE=1 SV=1 | 46 | 356 | 6.0E-13 |
| sp|Q6Z955|CKX11_ORYSJ | Cytokinin dehydrogenase 11 OS=Oryza sativa subsp. japonica GN=CKX11 PE=2 SV=1 | 44 | 250 | 7.0E-13 |
| sp|D4B1Z7|A2478_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02478 PE=1 SV=1 | 115 | 460 | 2.0E-12 |
| sp|Q9FUJ1|CKX7_ARATH | Cytokinin dehydrogenase 7 OS=Arabidopsis thaliana GN=CKX7 PE=1 SV=1 | 46 | 227 | 4.0E-12 |
| sp|Q9FUJ3|CKX2_ARATH | Cytokinin dehydrogenase 2 OS=Arabidopsis thaliana GN=CKX2 PE=1 SV=2 | 46 | 227 | 1.0E-10 |
| sp|D4B1P2|A2372_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02372 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02372 PE=1 SV=1 | 46 | 217 | 3.0E-10 |
| sp|Q5Z620|CKX10_ORYSJ | Cytokinin dehydrogenase 10 OS=Oryza sativa subsp. japonica GN=CKX10 PE=3 SV=1 | 48 | 227 | 9.0E-09 |
| sp|O22213|CKX1_ARATH | Cytokinin dehydrogenase 1 OS=Arabidopsis thaliana GN=CKX1 PE=1 SV=1 | 38 | 227 | 1.0E-08 |
| sp|Q6YW51|CKX6_ORYSJ | Cytokinin dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CKX6 PE=3 SV=1 | 9 | 237 | 1.0E-08 |
| sp|Q75K78|CKX9_ORYSJ | Cytokinin dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CKX9 PE=2 SV=1 | 48 | 237 | 8.0E-08 |
| sp|P46377|FAS5_RHOFA | Uncharacterized oxidoreductase ORF5 in fasciation locus OS=Rhodococcus fascians GN=fas5 PE=2 SV=1 | 59 | 224 | 9.0E-08 |
| sp|Q6YW50|CKX7_ORYSJ | Cytokinin dehydrogenase 7 OS=Oryza sativa subsp. japonica GN=CKX7 PE=3 SV=1 | 44 | 227 | 1.0E-07 |
| sp|Q5ZAY9|CKX5_ORYSJ | Cytokinin dehydrogenase 5 OS=Oryza sativa subsp. japonica GN=CKX5 PE=2 SV=1 | 47 | 230 | 2.0E-07 |
| sp|P43485|MCRA_STRLA | Mitomycin radical oxidase OS=Streptomyces lavendulae GN=mcrA PE=1 SV=2 | 48 | 216 | 2.0E-07 |
| sp|Q9LY71|CKX6_ARATH | Cytokinin dehydrogenase 6 OS=Arabidopsis thaliana GN=CKX6 PE=2 SV=2 | 38 | 251 | 3.0E-07 |
| sp|Q3ZC33|GGLO_BOVIN | L-gulonolactone oxidase OS=Bos taurus GN=GULO PE=2 SV=3 | 48 | 217 | 1.0E-06 |
| sp|D4AS41|A7056_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07056 PE=1 SV=2 | 44 | 251 | 1.0E-06 |
| sp|Q8HXW0|GGLO_PIG | L-gulonolactone oxidase OS=Sus scrofa GN=GULO PE=2 SV=3 | 48 | 217 | 3.0E-06 |
| sp|P58710|GGLO_MOUSE | L-gulonolactone oxidase OS=Mus musculus GN=Gulo PE=1 SV=3 | 48 | 217 | 6.0E-06 |
| sp|A3AVP1|CKX8_ORYSJ | Cytokinin dehydrogenase 8 OS=Oryza sativa subsp. japonica GN=CKX8 PE=3 SV=1 | 48 | 226 | 9.0E-06 |
| sp|A2XVN3|CKX8_ORYSI | Cytokinin dehydrogenase 8 OS=Oryza sativa subsp. indica GN=CKX8 PE=3 SV=1 | 48 | 226 | 9.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0055114 | oxidation-reduction process | Yes |
| GO:0050660 | flavin adenine dinucleotide binding | Yes |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0050662 | coenzyme binding | No |
| GO:0005488 | binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0043168 | anion binding | No |
| GO:0003674 | molecular_function | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0043167 | ion binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0008150 | biological_process | No |
| GO:0048037 | cofactor binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0008152 | metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 26 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|7959 MGSGHSSGLATCLDAVCNGRHACVAYPDHLLYQASWVDRYNLDIPVHPIAVTRPSNADDVSGFVKCAAANNVRVQ AKSGGHSYANYGLGGEDGELVIDLRHLQHFSMDTNTWQATIGAGHRLWDVTHKLHENGKRAVSHGTCPGVGIGGH ATIGGLGPSSRMWGSCLDHVVEVEVVTADGSIRRASERENADLFFALKGAGAGFGVITEFVMKTHPEPGSVVRYT YSVNFGRHADMVDVFDQWQALISDPGLDRRFGSEIIMHAFGLVISATFHGTRDEYEASGIPDRIPRGNVSVLLDN WLGVVGNQAQDAGLWVSEVRSSFTSRSLAFRRDQLLSRDDIVRMMDFLDRTDKGTLVWFLIFDVTGGAIGDVRTD ATAYAHRDKIMFCQGYAVGIPALTRKTRVFMDGLISTIRETANSTLTTYPGYVDPSLHDAQASYWGPNLPRLTEV KTKWDPQDVFHNPQSVRPSGKD* |
| Coding | >Hirsu2|7959 ATGGGCAGCGGGCACAGCTCCGGGCTGGCGACGTGCCTCGACGCCGTCTGCAACGGCCGCCACGCCTGTGTCGCA TACCCGGACCACCTTCTCTACCAGGCCTCCTGGGTTGACCGGTACAATCTCGACATCCCCGTGCATCCGATTGCC GTGACGAGGCCCAGCAATGCCGACGACGTGTCCGGCTTTGTCAAGTGCGCGGCCGCCAACAACGTCAGGGTCCAA GCCAAGTCCGGCGGCCACTCGTATGCCAACTATGGACTGGGAGGAGAGGACGGCGAGCTCGTCATCGACCTGCGC CATCTCCAACACTTCTCCATGGACACCAACACGTGGCAGGCCACCATCGGCGCCGGCCACCGCCTATGGGACGTC ACCCACAAGCTGCATGAGAACGGCAAACGGGCCGTCTCCCACGGGACATGTCCCGGGGTCGGCATCGGCGGCCAC GCCACCATCGGAGGCCTGGGCCCGTCTTCCAGGATGTGGGGGTCGTGCCTTGACCACGTTGTCGAGGTCGAGGTC GTGACGGCGGACGGGAGCATCCGGCGCGCGAGCGAGCGGGAGAACGCCGACCTGTTCTTCGCTCTCAAGGGCGCC GGGGCCGGCTTCGGCGTCATCACCGAGTTCGTCATGAAGACGCACCCGGAGCCCGGCAGCGTGGTGCGGTACACG TACTCGGTCAACTTCGGCCGGCACGCCGACATGGTCGACGTCTTCGACCAGTGGCAGGCCCTCATCTCGGACCCG GGCCTCGACCGCCGCTTCGGCTCCGAGATCATCATGCACGCCTTCGGCCTCGTCATCTCGGCCACCTTCCACGGC ACGCGCGACGAGTATGAGGCCAGCGGCATCCCCGACCGCATCCCGCGCGGTAACGTCTCTGTCCTCCTCGACAAC TGGCTCGGCGTCGTCGGCAACCAGGCCCAGGACGCCGGTCTCTGGGTCTCCGAGGTCCGCAGCAGCTTCACCTCG CGCAGCCTGGCCTTCCGCAGGGACCAGCTGCTGTCGCGCGACGACATCGTCCGCATGATGGATTTCCTCGACCGC ACCGACAAGGGCACCTTGGTGTGGTTCCTCATCTTCGACGTCACCGGCGGCGCCATCGGCGACGTCCGCACCGAT GCCACCGCCTACGCCCACCGCGACAAGATCATGTTCTGCCAGGGCTACGCCGTCGGCATCCCGGCCCTGACGCGC AAGACCCGTGTCTTCATGGACGGCCTGATCTCGACCATCCGCGAAACGGCCAACTCGACCCTGACCACCTACCCG GGCTACGTCGACCCGTCCCTGCACGACGCCCAAGCCTCGTACTGGGGGCCCAACTTGCCGAGGCTCACCGAGGTC AAGACCAAGTGGGATCCGCAAGACGTCTTCCACAACCCGCAGAGCGTGCGCCCGTCCGGCAAGGACTGA |
| Transcript | >Hirsu2|7959 ATGGGCAGCGGGCACAGCTCCGGGCTGGCGACGTGCCTCGACGCCGTCTGCAACGGCCGCCACGCCTGTGTCGCA TACCCGGACCACCTTCTCTACCAGGCCTCCTGGGTTGACCGGTACAATCTCGACATCCCCGTGCATCCGATTGCC GTGACGAGGCCCAGCAATGCCGACGACGTGTCCGGCTTTGTCAAGTGCGCGGCCGCCAACAACGTCAGGGTCCAA GCCAAGTCCGGCGGCCACTCGTATGCCAACTATGGACTGGGAGGAGAGGACGGCGAGCTCGTCATCGACCTGCGC CATCTCCAACACTTCTCCATGGACACCAACACGTGGCAGGCCACCATCGGCGCCGGCCACCGCCTATGGGACGTC ACCCACAAGCTGCATGAGAACGGCAAACGGGCCGTCTCCCACGGGACATGTCCCGGGGTCGGCATCGGCGGCCAC GCCACCATCGGAGGCCTGGGCCCGTCTTCCAGGATGTGGGGGTCGTGCCTTGACCACGTTGTCGAGGTCGAGGTC GTGACGGCGGACGGGAGCATCCGGCGCGCGAGCGAGCGGGAGAACGCCGACCTGTTCTTCGCTCTCAAGGGCGCC GGGGCCGGCTTCGGCGTCATCACCGAGTTCGTCATGAAGACGCACCCGGAGCCCGGCAGCGTGGTGCGGTACACG TACTCGGTCAACTTCGGCCGGCACGCCGACATGGTCGACGTCTTCGACCAGTGGCAGGCCCTCATCTCGGACCCG GGCCTCGACCGCCGCTTCGGCTCCGAGATCATCATGCACGCCTTCGGCCTCGTCATCTCGGCCACCTTCCACGGC ACGCGCGACGAGTATGAGGCCAGCGGCATCCCCGACCGCATCCCGCGCGGTAACGTCTCTGTCCTCCTCGACAAC TGGCTCGGCGTCGTCGGCAACCAGGCCCAGGACGCCGGTCTCTGGGTCTCCGAGGTCCGCAGCAGCTTCACCTCG CGCAGCCTGGCCTTCCGCAGGGACCAGCTGCTGTCGCGCGACGACATCGTCCGCATGATGGATTTCCTCGACCGC ACCGACAAGGGCACCTTGGTGTGGTTCCTCATCTTCGACGTCACCGGCGGCGCCATCGGCGACGTCCGCACCGAT GCCACCGCCTACGCCCACCGCGACAAGATCATGTTCTGCCAGGGCTACGCCGTCGGCATCCCGGCCCTGACGCGC AAGACCCGTGTCTTCATGGACGGCCTGATCTCGACCATCCGCGAAACGGCCAACTCGACCCTGACCACCTACCCG GGCTACGTCGACCCGTCCCTGCACGACGCCCAAGCCTCGTACTGGGGGCCCAACTTGCCGAGGCTCACCGAGGTC AAGACCAAGTGGGATCCGCAAGACGTCTTCCACAACCCGCAGAGCGTGCGCCCGTCCGGCAAGGACTGA |
| Gene | >Hirsu2|7959 ATGGGCAGCGGGCACAGCTCCGGGCTGGCGACGTGCCTCGACGCCGTCTGCAACGGCCGCCACGCCTGTGTCGCA TACCCGGACCACCTTCTCTACCAGGCCTCCTGGGTTGACCGGTACAATCTCGACATCCCCGTGCATCCGATTGCC GTGACGAGGCCCAGCAATGCCGACGACGTGTCCGGCTTTGTCAAGTGCGCGGCCGCCAACAACGTCAGGGTCCAA GCCAAGTCCGGCGGCCACTCGTATGCGTATGTCTCTCTCCGCCCGTATCGTATCCATGACCCCTCGACTCTCGTC TCCCGGCTTCTGCCTGCCTCGTCGACGTGCTGAGCGCTGACGCGACCACTTCAAGCAACTATGGTGAGTTCGACT GGGGCTCGCAAGCCTCATCCTGCACACGCCCAACGCTGACGCGCGGGCCGCAGGACTGGGAGGAGAGGACGGCGA GCTCGTCATCGACCTGCGCCATCTCCAACACTTCTCCATGGACACCAACACGTGGCAGGCCACCATCGGCGCCGG CCACCGCCTATGGGACGTCACCCACAAGCTGCATGAGAACGGCAAACGGGCCGTCTCCCACGGGACATGTCCCGG GGTCGGCATCGGCGGCCACGCCACCATCGTGAGTCGCGTTACGGTCTCAGAGGGGGGCCGAGGTCGAGCCGTGCT GATTCCAGACCCAAAGGGAGGCCTGGGCCCGTCTTCCAGGATGTGGGGGTCGTGCCTTGACCACGTTGTCGAGGT CGAGGTCGTGACGGCGGACGGGAGCATCCGGCGCGCGAGCGAGCGGGAGAACGCCGACCTGTTCTTCGTAAGTCT TCGTCTTCTTCACCCGCTCAAGGCCCGTCACACCGGACGGCTGACCCCGGGAGGCGCACAGGCTCTCAAGGGCGC CGGGGCCGGCTTCGGCGTCATCACCGAGTTCGTCATGAAGACGCACCCGGAGCCCGGCAGCGTGGTGCGGTACAC GTACTCGGTCAACTTCGGCCGGCACGCCGACATGGTCGACGTCTTCGACCAGTGGCAGGCCCTCATCTCGGACCC GGGCCTCGACCGCCGCTTCGGCTCCGAGATCATCATGCACGCCTTCGGCCTCGTCATCTCGGCCACCTTCCACGG CACGCGCGACGAGTATGAGGCCAGCGGCATCCCCGACCGCATCCCGCGCGGTAACGTCTCTGTCCTCCTCGACAA CTGGCTCGGCGTCGTCGGCAACCAGGCCCAGGACGCCGGTCTCTGGGTCTCCGAGGTCCGCAGCAGCTTCACCTC GCGCAGCCTGGCCTTCCGCAGGGACCAGCTGCTGTCGCGCGACGACATCGTCCGCATGATGGATTTCCTCGACCG CACCGACAAGGGCACCTTGGTGTGGTTCCTCATCTTCGACGTCACCGGCGGCGCCATCGGCGACGTCCGCACCGA TGCCACCGCCTACGCCCACCGCGACAAGATCATGTTCTGCCAGGGCTACGCCGTCGGCATCCCGGCCCTGACGCG CAAGACCCGTGTCTTCATGGACGGCCTGATCTCGACCATCCGCGAAACGGCCAACTCGACCCTGACCACCTACCC GGGCTACGTCGACCCGTCCCTGCACGACGCCCAAGCCTCGTACTGGGGGCCCAACTTGCCGAGGCTCACCGAGGT CAAGACCAAGTGGGATCCGCAAGACGTCTTCCACAACCCGCAGAGCGTGCGCCCGTCCGGCAAGGACTGA |