Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7957
Gene name
LocationContig_492:16227..16903
Strand+
Gene length (bp)676
Transcript length (bp)411
Coding sequence length (bp)411
Protein length (aa) 137

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04828 GFA Glutathione-dependent formaldehyde-activating enzyme 3.9E-25 28 117

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0016846 carbon-sulfur lyase activity Yes
GO:0003674 molecular_function No
GO:0003824 catalytic activity No
GO:0016829 lyase activity No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.7752 0.3859 0.1564 0.083 0.0352 0.0025 0.0145 0.0814 0.0212 0.0085

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup446
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3428
Ophiocordyceps australis map64 (Brazil) OphauB2|7120
Ophiocordyceps camponoti-floridani Ophcf2|02991
Ophiocordyceps camponoti-floridani Ophcf2|05475
Ophiocordyceps camponoti-rufipedis Ophun1|3452
Ophiocordyceps camponoti-rufipedis Ophun1|5332
Ophiocordyceps kimflemingae Ophio5|2435
Ophiocordyceps kimflemingae Ophio5|7341
Ophiocordyceps subramaniannii Hirsu2|7957 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7957
MPLTGHCLCKAVTYNADVDAPAVTGYDHCDDCQRQTGSTYSLVTIVPKSKLTINGPVKKWAGKGSSGKTVYRIFC
SECGSPIAHDPDAAPEIIVLKAGTLDTEIKKTLKPDTEIWTAGKLPFCQEKLAKSFTHMPQ*
Coding >Hirsu2|7957
ATGCCTCTCACCGGACACTGCCTCTGCAAGGCCGTCACCTACAACGCCGACGTCGACGCTCCGGCCGTGACGGGG
TACGACCACTGCGACGACTGCCAGCGCCAGACGGGCTCGACATACTCTCTCGTCACCATCGTCCCCAAGAGCAAG
CTCACGATCAACGGCCCCGTCAAGAAGTGGGCCGGCAAGGGCTCCTCGGGCAAGACCGTGTACCGCATCTTCTGC
TCCGAGTGCGGCTCGCCCATTGCCCACGACCCGGACGCCGCGCCCGAGATCATTGTCCTCAAGGCCGGCACCCTG
GACACGGAGATCAAGAAGACCCTCAAGCCTGACACCGAGATCTGGACGGCCGGCAAGCTCCCCTTCTGCCAGGAG
AAGCTGGCCAAGTCGTTCACGCACATGCCCCAGTAA
Transcript >Hirsu2|7957
ATGCCTCTCACCGGACACTGCCTCTGCAAGGCCGTCACCTACAACGCCGACGTCGACGCTCCGGCCGTGACGGGG
TACGACCACTGCGACGACTGCCAGCGCCAGACGGGCTCGACATACTCTCTCGTCACCATCGTCCCCAAGAGCAAG
CTCACGATCAACGGCCCCGTCAAGAAGTGGGCCGGCAAGGGCTCCTCGGGCAAGACCGTGTACCGCATCTTCTGC
TCCGAGTGCGGCTCGCCCATTGCCCACGACCCGGACGCCGCGCCCGAGATCATTGTCCTCAAGGCCGGCACCCTG
GACACGGAGATCAAGAAGACCCTCAAGCCTGACACCGAGATCTGGACGGCCGGCAAGCTCCCCTTCTGCCAGGAG
AAGCTGGCCAAGTCGTTCACGCACATGCCCCAGTAA
Gene >Hirsu2|7957
ATGCCTCTCACCGGACACTGCCTCTGCAAGGCCGTCACCTACAACGCCGACGTCGACGCTCCGGCCGTGACGGGG
TACGACCACTGCGACGACTGCCAGCGCCAGACGGGCTCGACATACTGTGCGTCTCCCAACAGCGTTTTTCTCCGT
CGTCCCTCTCCCCGCTCTTGACCTCGCCTTCGCCTTCCCTGAACCTTGGCCCCCGACACCCTGTCCCCTGATACC
GCCTCGCCGTCAACAGCTTTCCTCACAGCTCACATCCCGAAAGACTGGTGGCGGTAAAGACTGACCACAGCGGCC
GCTCCTAGCTCTCGTCACCATCGTCCCCAAGAGCAAGCTCACGATCAACGGCCCCGTCAAGAAGTGGGCCGGCAA
GGGCTCCTCGGGCAAGACCGTGTACCGCATCTTCTGCTCCGAGTGCGGCTCGCCCATTGCCCACGACCCGGACGC
CGCGCCCGAGATCATTGTCCTCAAGGCCGGCACCCTGGACACGGAGATCAAGAAGACCCTCAAGCCTGTACGTCA
ATGATGCTCTTATACCCACCATGCCGCTGGACATACACAGGCTGGCTAACCGCACTCGGCGTTCCTGCAGGACAC
CGAGATCTGGACGGCCGGCAAGCTCCCCTTCTGCCAGGAGAAGCTGGCCAAGTCGTTCACGCACATGCCCCAGTA
A

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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