Protein ID | Hirsu2|7956 |
Gene name | |
Location | Contig_492:13390..15339 |
Strand | + |
Gene length (bp) | 1949 |
Transcript length (bp) | 1899 |
Coding sequence length (bp) | 1899 |
Protein length (aa) | 633 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07103 | DUF1365 | Protein of unknown function (DUF1365) | 5.4E-61 | 119 | 395 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 27 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 28 | 59 | 31 |
2 | 80 | 98 | 18 |
3 | 602 | 624 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|7956 MDGLSDDSLWLPVILLVDLADRLTHGGVVPVFFLCLIFSCYVFFGSWLDLLLASALFGLRMLASLTHGARDSAPL RPIRVLASLGLMIIPSWLILRLVRSTLVARDGAAWHGLGRPYLIPCRTTHRRQFPKQHSFSYSYLVVGVPVGYSG NANGMVSVDGAKRGGQRAWYHVDAADYLQRGHGELGLRGKLDGYLASQGADPADYPHAYLITAARFLGHHFNPVS FWYLYSPDRVLSAVVLEVNNTFGERRPYLVLRDFAEEARHIMADASPGPVGTAPSRVKGAWPKDFHVSPFNSRKG AYSLLANDPLGADMESFRGLNVTISLTSSKGHSKIIARLFSEGETADPSTMGPAQKLRFLLGWFWVGFATFPRIA KEAAVLFFQRKLHVWYRPEPLKESLGRHADSIERDLEAVFRRYLCFLVQQSSRPLSVKYTPSGVTDFADDTYTSR TAKSQPGAVEHVEMRILTPVFYSRFVHYAHDFEGIFSELTENGTVWVNKPHALPGIFLKKAPPPLESSTFIDFVC FKLIQRLRRRPETIPQEPTISGRPVKATTKRALDIRGFRISPMDAYVLGQEDKDLVASYRWAVLRLFLADRFLLG HTELFTIVGILGHASLAWVSAWLLDAVTSKMR* |
Coding | >Hirsu2|7956 ATGGACGGCCTGTCGGATGATTCGCTGTGGCTTCCCGTGATTCTCCTGGTCGACCTGGCCGACCGGCTGACACAC GGCGGAGTCGTGCCTGTCTTCTTTCTCTGCCTCATTTTCTCCTGCTATGTCTTTTTCGGGAGCTGGCTGGACCTT CTCCTGGCCTCGGCCCTCTTCGGGCTGAGGATGCTGGCTTCTCTCACTCACGGCGCTCGCGATTCGGCACCCCTG CGGCCGATCCGAGTGCTGGCGAGCCTCGGTCTCATGATCATCCCCAGCTGGCTCATCCTCCGTCTTGTGCGGTCG ACGTTGGTGGCCAGAGACGGCGCGGCCTGGCACGGCCTCGGGAGGCCGTACCTGATACCCTGCCGGACGACCCAC AGGCGGCAGTTTCCAAAGCAGCATTCGTTTTCCTATTCCTACCTCGTCGTGGGCGTCCCCGTGGGCTACAGCGGC AACGCCAATGGCATGGTGTCGGTGGACGGCGCAAAGCGAGGCGGCCAAAGGGCCTGGTATCATGTGGACGCCGCA GACTATCTGCAGAGGGGCCATGGCGAGCTCGGCTTACGTGGGAAGCTGGACGGCTACCTCGCATCTCAGGGGGCC GATCCTGCAGACTACCCCCATGCCTACCTCATTACGGCGGCCCGGTTCCTGGGACACCACTTCAACCCGGTCTCG TTCTGGTATCTCTACTCGCCCGACAGGGTCCTTTCCGCCGTCGTGCTCGAGGTCAACAACACGTTTGGCGAGAGG CGGCCTTACCTCGTGCTGCGCGACTTTGCGGAAGAGGCCAGGCATATTATGGCCGACGCCAGCCCCGGTCCTGTC GGCACAGCCCCATCGCGGGTCAAGGGTGCTTGGCCCAAGGATTTTCACGTCTCGCCCTTCAATTCCCGCAAGGGT GCCTACTCGCTCCTCGCAAACGACCCCCTCGGCGCCGACATGGAAAGTTTCCGCGGCCTCAACGTCACCATCAGC CTGACATCGTCCAAGGGCCACTCCAAGATCATCGCCCGCCTCTTCTCCGAGGGCGAGACGGCCGATCCGTCCACC ATGGGCCCCGCGCAGAAGCTGAGGTTTCTCCTCGGCTGGTTCTGGGTAGGCTTCGCCACCTTTCCCCGGATCGCC AAGGAGGCCGCCGTCCTGTTCTTCCAGCGCAAGCTCCACGTCTGGTACCGGCCGGAGCCCCTCAAGGAAAGCCTG GGCAGACACGCCGACAGCATCGAGAGGGACTTGGAGGCCGTCTTCCGACGCTACCTGTGCTTTCTCGTCCAGCAG TCCTCGCGCCCGCTCTCGGTAAAGTACACGCCGAGCGGCGTGACCGACTTCGCCGACGACACGTACACGTCGCGG ACGGCCAAGAGCCAGCCCGGGGCCGTCGAACACGTCGAGATGAGGATTCTGACGCCCGTCTTCTACTCCCGCTTC GTCCACTACGCACACGACTTCGAGGGCATCTTTAGCGAATTGACGGAAAACGGCACGGTCTGGGTGAACAAGCCG CACGCGCTGCCGGGCATCTTCCTCAAGAAGGCGCCGCCGCCGCTCGAGTCGTCGACCTTTATCGACTTTGTCTGC TTCAAGCTGATACAGCGCCTGCGGCGGAGGCCCGAGACAATCCCGCAGGAGCCCACGATTTCGGGCCGGCCCGTC AAGGCGACGACGAAACGCGCTCTCGACATCCGAGGGTTTCGCATATCGCCCATGGACGCCTACGTGCTGGGCCAG GAGGACAAGGACCTGGTCGCCAGCTACCGGTGGGCCGTGCTTCGCCTCTTCCTGGCCGACCGCTTTCTCCTCGGC CACACCGAGCTCTTCACGATAGTCGGGATCCTCGGGCACGCCAGCCTCGCATGGGTCTCGGCCTGGCTGCTGGAT GCGGTCACAAGCAAGATGCGGTGA |
Transcript | >Hirsu2|7956 ATGGACGGCCTGTCGGATGATTCGCTGTGGCTTCCCGTGATTCTCCTGGTCGACCTGGCCGACCGGCTGACACAC GGCGGAGTCGTGCCTGTCTTCTTTCTCTGCCTCATTTTCTCCTGCTATGTCTTTTTCGGGAGCTGGCTGGACCTT CTCCTGGCCTCGGCCCTCTTCGGGCTGAGGATGCTGGCTTCTCTCACTCACGGCGCTCGCGATTCGGCACCCCTG CGGCCGATCCGAGTGCTGGCGAGCCTCGGTCTCATGATCATCCCCAGCTGGCTCATCCTCCGTCTTGTGCGGTCG ACGTTGGTGGCCAGAGACGGCGCGGCCTGGCACGGCCTCGGGAGGCCGTACCTGATACCCTGCCGGACGACCCAC AGGCGGCAGTTTCCAAAGCAGCATTCGTTTTCCTATTCCTACCTCGTCGTGGGCGTCCCCGTGGGCTACAGCGGC AACGCCAATGGCATGGTGTCGGTGGACGGCGCAAAGCGAGGCGGCCAAAGGGCCTGGTATCATGTGGACGCCGCA GACTATCTGCAGAGGGGCCATGGCGAGCTCGGCTTACGTGGGAAGCTGGACGGCTACCTCGCATCTCAGGGGGCC GATCCTGCAGACTACCCCCATGCCTACCTCATTACGGCGGCCCGGTTCCTGGGACACCACTTCAACCCGGTCTCG TTCTGGTATCTCTACTCGCCCGACAGGGTCCTTTCCGCCGTCGTGCTCGAGGTCAACAACACGTTTGGCGAGAGG CGGCCTTACCTCGTGCTGCGCGACTTTGCGGAAGAGGCCAGGCATATTATGGCCGACGCCAGCCCCGGTCCTGTC GGCACAGCCCCATCGCGGGTCAAGGGTGCTTGGCCCAAGGATTTTCACGTCTCGCCCTTCAATTCCCGCAAGGGT GCCTACTCGCTCCTCGCAAACGACCCCCTCGGCGCCGACATGGAAAGTTTCCGCGGCCTCAACGTCACCATCAGC CTGACATCGTCCAAGGGCCACTCCAAGATCATCGCCCGCCTCTTCTCCGAGGGCGAGACGGCCGATCCGTCCACC ATGGGCCCCGCGCAGAAGCTGAGGTTTCTCCTCGGCTGGTTCTGGGTAGGCTTCGCCACCTTTCCCCGGATCGCC AAGGAGGCCGCCGTCCTGTTCTTCCAGCGCAAGCTCCACGTCTGGTACCGGCCGGAGCCCCTCAAGGAAAGCCTG GGCAGACACGCCGACAGCATCGAGAGGGACTTGGAGGCCGTCTTCCGACGCTACCTGTGCTTTCTCGTCCAGCAG TCCTCGCGCCCGCTCTCGGTAAAGTACACGCCGAGCGGCGTGACCGACTTCGCCGACGACACGTACACGTCGCGG ACGGCCAAGAGCCAGCCCGGGGCCGTCGAACACGTCGAGATGAGGATTCTGACGCCCGTCTTCTACTCCCGCTTC GTCCACTACGCACACGACTTCGAGGGCATCTTTAGCGAATTGACGGAAAACGGCACGGTCTGGGTGAACAAGCCG CACGCGCTGCCGGGCATCTTCCTCAAGAAGGCGCCGCCGCCGCTCGAGTCGTCGACCTTTATCGACTTTGTCTGC TTCAAGCTGATACAGCGCCTGCGGCGGAGGCCCGAGACAATCCCGCAGGAGCCCACGATTTCGGGCCGGCCCGTC AAGGCGACGACGAAACGCGCTCTCGACATCCGAGGGTTTCGCATATCGCCCATGGACGCCTACGTGCTGGGCCAG GAGGACAAGGACCTGGTCGCCAGCTACCGGTGGGCCGTGCTTCGCCTCTTCCTGGCCGACCGCTTTCTCCTCGGC CACACCGAGCTCTTCACGATAGTCGGGATCCTCGGGCACGCCAGCCTCGCATGGGTCTCGGCCTGGCTGCTGGAT GCGGTCACAAGCAAGATGCGGTGA |
Gene | >Hirsu2|7956 ATGGACGGCCTGTCGGATGATTCGCTGTGGCTTCCCGTGATTCTCCTGGTCGACCTGGCCGACCGGCTGACACAC GGCGGAGTCGTGCCTGTCTTCTTTCTCTGCCTCATTTTCTCCTGCTATGTCTTTTTCGGGAGCTGGCTGGACCTT CTCCTGGCCTCGGCCCTCTTCGGGCTGAGGATGCTGGCTTCTCTCACTCACGGCGCTCGCGATTCGGCACCCCTG CGGCCGATCCGAGTGCTGGCGAGCCTCGGTCTCATGATCATCCCCAGCTGGCTCATCCTCCGTCTTGTGCGGTCG ACGTTGGTGGCCAGAGACGGCGCGGCCTGGCACGGCCTCGGGAGGCCGTACCTGATACCCTGCCGGACGACCCAC AGGCGGCAGTTTCCAAAGCAGCATTCGTTTTCCTATTCCTACCTCGTCGTGGGCGTCCCCGTGGGCTACAGCGGC AACGCCAATGGCATGGTGTCGGTGGACGGCGCAAAGCGAGGCGGCCAAAGGGCCTGGTATCATGTGGACGCCGCA GACTATCTGCAGAGGGGCCATGGCGAGCTCGGCTTACGTGGGAAGCTGGACGGCTACCTCGCATCTCAGGTTTGC TGGCGGCCGCCGAAATTGCGTAGAGGCATGCTAATCTCGCGTAGGGGGCCGATCCTGCAGACTACCCCCATGCCT ACCTCATTACGGCGGCCCGGTTCCTGGGACACCACTTCAACCCGGTCTCGTTCTGGTATCTCTACTCGCCCGACA GGGTCCTTTCCGCCGTCGTGCTCGAGGTCAACAACACGTTTGGCGAGAGGCGGCCTTACCTCGTGCTGCGCGACT TTGCGGAAGAGGCCAGGCATATTATGGCCGACGCCAGCCCCGGTCCTGTCGGCACAGCCCCATCGCGGGTCAAGG GTGCTTGGCCCAAGGATTTTCACGTCTCGCCCTTCAATTCCCGCAAGGGTGCCTACTCGCTCCTCGCAAACGACC CCCTCGGCGCCGACATGGAAAGTTTCCGCGGCCTCAACGTCACCATCAGCCTGACATCGTCCAAGGGCCACTCCA AGATCATCGCCCGCCTCTTCTCCGAGGGCGAGACGGCCGATCCGTCCACCATGGGCCCCGCGCAGAAGCTGAGGT TTCTCCTCGGCTGGTTCTGGGTAGGCTTCGCCACCTTTCCCCGGATCGCCAAGGAGGCCGCCGTCCTGTTCTTCC AGCGCAAGCTCCACGTCTGGTACCGGCCGGAGCCCCTCAAGGAAAGCCTGGGCAGACACGCCGACAGCATCGAGA GGGACTTGGAGGCCGTCTTCCGACGCTACCTGTGCTTTCTCGTCCAGCAGTCCTCGCGCCCGCTCTCGGTAAAGT ACACGCCGAGCGGCGTGACCGACTTCGCCGACGACACGTACACGTCGCGGACGGCCAAGAGCCAGCCCGGGGCCG TCGAACACGTCGAGATGAGGATTCTGACGCCCGTCTTCTACTCCCGCTTCGTCCACTACGCACACGACTTCGAGG GCATCTTTAGCGAATTGACGGAAAACGGCACGGTCTGGGTGAACAAGCCGCACGCGCTGCCGGGCATCTTCCTCA AGAAGGCGCCGCCGCCGCTCGAGTCGTCGACCTTTATCGACTTTGTCTGCTTCAAGCTGATACAGCGCCTGCGGC GGAGGCCCGAGACAATCCCGCAGGAGCCCACGATTTCGGGCCGGCCCGTCAAGGCGACGACGAAACGCGCTCTCG ACATCCGAGGGTTTCGCATATCGCCCATGGACGCCTACGTGCTGGGCCAGGAGGACAAGGACCTGGTCGCCAGCT ACCGGTGGGCCGTGCTTCGCCTCTTCCTGGCCGACCGCTTTCTCCTCGGCCACACCGAGCTCTTCACGATAGTCG GGATCCTCGGGCACGCCAGCCTCGCATGGGTCTCGGCCTGGCTGCTGGATGCGGTCACAAGCAAGATGCGGTGA |