Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7914
Gene name
LocationContig_489:12081..12879
Strand-
Gene length (bp)798
Transcript length (bp)798
Coding sequence length (bp)798
Protein length (aa) 266

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12706 Lactamase_B_2 Beta-lactamase superfamily domain 5.2E-14 31 227
PF13483 Lactamase_B_3 Beta-lactamase superfamily domain 3.1E-09 14 226

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q8TV58|Y1542_METKA UPF0173 metal-dependent hydrolase MK1542 OS=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=MK1542 PE=3 SV=1 13 260 4.0E-12
sp|Q2FR07|Y1705_METHJ UPF0173 metal-dependent hydrolase Mhun_1705 OS=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) GN=Mhun_1705 PE=3 SV=1 13 264 2.0E-11
sp|Q8TR74|Y1308_METAC UPF0173 metal-dependent hydrolase MA_1308 OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=MA_1308 PE=3 SV=1 13 260 1.0E-10
sp|C4L3C9|Y495_EXISA UPF0173 metal-dependent hydrolase EAT1b_0495 OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=EAT1b_0495 PE=3 SV=1 13 250 6.0E-10
sp|Q8PUN2|Y2300_METMA UPF0173 metal-dependent hydrolase MM_2300 OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=MM_2300 PE=3 SV=1 13 260 5.0E-09
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Swissprot ID Swissprot Description Start End E-value
sp|Q8TV58|Y1542_METKA UPF0173 metal-dependent hydrolase MK1542 OS=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=MK1542 PE=3 SV=1 13 260 4.0E-12
sp|Q2FR07|Y1705_METHJ UPF0173 metal-dependent hydrolase Mhun_1705 OS=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) GN=Mhun_1705 PE=3 SV=1 13 264 2.0E-11
sp|Q8TR74|Y1308_METAC UPF0173 metal-dependent hydrolase MA_1308 OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=MA_1308 PE=3 SV=1 13 260 1.0E-10
sp|C4L3C9|Y495_EXISA UPF0173 metal-dependent hydrolase EAT1b_0495 OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=EAT1b_0495 PE=3 SV=1 13 250 6.0E-10
sp|Q8PUN2|Y2300_METMA UPF0173 metal-dependent hydrolase MM_2300 OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=MM_2300 PE=3 SV=1 13 260 5.0E-09
sp|Q74N11|Y378_NANEQ UPF0173 metal-dependent hydrolase NEQ378 OS=Nanoarchaeum equitans (strain Kin4-M) GN=NEQ378 PE=3 SV=1 63 249 1.0E-07
sp|Q92BD8|Y1612_LISIN UPF0173 metal-dependent hydrolase lin1612 OS=Listeria innocua serovar 6a (strain CLIP 11262) GN=lin1612 PE=3 SV=1 13 246 2.0E-07
sp|B8DHH0|Y991_LISMH UPF0173 metal-dependent hydrolase LMHCC_0991 OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=LMHCC_0991 PE=3 SV=1 13 246 3.0E-07
sp|A7I6H3|Y816_METB6 UPF0173 metal-dependent hydrolase Mboo_0816 OS=Methanoregula boonei (strain 6A8) GN=Mboo_0816 PE=3 SV=1 164 264 3.0E-07
sp|Q1J245|Y136_DEIGD UPF0173 metal-dependent hydrolase Dgeo_0136 OS=Deinococcus geothermalis (strain DSM 11300) GN=Dgeo_0136 PE=3 SV=2 68 264 4.0E-07
sp|A3CVF0|Y1421_METMJ UPF0173 metal-dependent hydrolase Memar_1421 OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=Memar_1421 PE=3 SV=1 37 264 4.0E-07
sp|A4J5B2|Y1740_DESRM UPF0173 metal-dependent hydrolase Dred_1740 OS=Desulfotomaculum reducens (strain MI-1) GN=Dred_1740 PE=3 SV=1 13 264 7.0E-07
sp|Q8Y6V4|Y1577_LISMO UPF0173 metal-dependent hydrolase lmo1577 OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=lmo1577 PE=3 SV=1 13 246 1.0E-06
sp|C1KVM4|Y1588_LISMC UPF0173 metal-dependent hydrolase Lm4b_01588 OS=Listeria monocytogenes serotype 4b (strain CLIP80459) GN=Lm4b_01588 PE=3 SV=1 13 246 1.0E-06
sp|Q71Z90|Y1599_LISMF UPF0173 metal-dependent hydrolase LMOf2365_1599 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=LMOf2365_1599 PE=3 SV=1 13 246 2.0E-06
sp|Q464W3|Y3716_METBF UPF0173 metal-dependent hydrolase Mbar_A3716 OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=Mbar_A3716 PE=3 SV=1 61 260 2.0E-06
sp|B0R4Q9|Y2513_HALS3 UPF0173 metal-dependent hydrolase OE_2513F OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=OE_2513F PE=3 SV=1 141 257 3.0E-06
sp|Q9HQR5|Y1038_HALSA UPF0173 metal-dependent hydrolase VNG_1038C OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=VNG_1038C PE=3 SV=1 141 257 3.0E-06
sp|A4IRR6|Y2675_GEOTN UPF0173 metal-dependent hydrolase GTNG_2675 OS=Geobacillus thermodenitrificans (strain NG80-2) GN=GTNG_2675 PE=3 SV=1 13 236 4.0E-06
sp|A2SSL7|Y1154_METLZ UPF0173 metal-dependent hydrolase Mlab_1154 OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=Mlab_1154 PE=3 SV=1 69 251 4.0E-06
sp|Q5KWA1|Y2750_GEOKA UPF0173 metal-dependent hydrolase GK2750 OS=Geobacillus kaustophilus (strain HTA426) GN=GK2750 PE=3 SV=1 13 236 7.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7914
MAAAASSTFGSPLSITFVGTATAVLDIDGTAILTDPCFSPAGRVLDVGAFTLRVTRGPALQPDRLPPVDAVLLSH
EDHPDNLDDLGRRLLDGRRVFTTRDGARNLGPRPGLLGMRPWETGTLAVGGRRYDITATPCVHVPGGECVGFVVG
SSAFGQTGGLPNAIWFSGDTVYFDELRQIGSRFHVSVAIMNLGAAAVPGGPPITMGGRDAARLFKEIGADILVPM
HFDSWAHFAEDRAALARAFDESGVLESVCWLDPGKPKKVI*
Coding >Hirsu2|7914
ATGGCCGCTGCCGCCTCGTCGACCTTCGGGAGCCCCCTCAGCATCACCTTCGTCGGCACGGCGACGGCCGTGCTC
GACATCGACGGCACCGCCATCCTCACCGACCCCTGCTTCTCGCCGGCCGGCCGCGTCCTCGACGTCGGCGCCTTC
ACCCTGCGCGTCACGCGCGGTCCGGCCCTGCAGCCGGACCGGCTGCCGCCCGTCGACGCCGTCCTGCTGAGCCAC
GAGGACCACCCGGACAACCTCGACGACCTCGGCCGCCGCCTGCTCGACGGCCGCCGCGTCTTCACCACCCGCGAC
GGCGCCCGGAACCTCGGCCCCCGCCCGGGCCTCCTCGGCATGAGGCCCTGGGAGACCGGGACGCTGGCCGTCGGC
GGCAGGCGCTACGACATCACCGCCACGCCGTGCGTCCACGTTCCCGGCGGGGAGTGCGTCGGCTTCGTCGTCGGC
TCGTCCGCCTTCGGCCAGACCGGCGGCCTCCCCAACGCCATCTGGTTCTCGGGCGACACCGTCTACTTCGACGAG
CTCAGGCAGATCGGCTCCCGCTTCCACGTCAGCGTCGCCATCATGAACCTCGGCGCCGCCGCCGTGCCCGGCGGA
CCGCCCATCACCATGGGCGGCCGCGACGCTGCCCGCCTCTTCAAGGAGATTGGCGCCGACATCTTGGTGCCCATG
CACTTTGACTCGTGGGCTCACTTCGCTGAGGATAGGGCGGCACTCGCCAGGGCATTTGACGAGTCGGGCGTCCTG
GAAAGCGTTTGCTGGCTGGACCCCGGGAAGCCGAAGAAGGTCATCTAG
Transcript >Hirsu2|7914
ATGGCCGCTGCCGCCTCGTCGACCTTCGGGAGCCCCCTCAGCATCACCTTCGTCGGCACGGCGACGGCCGTGCTC
GACATCGACGGCACCGCCATCCTCACCGACCCCTGCTTCTCGCCGGCCGGCCGCGTCCTCGACGTCGGCGCCTTC
ACCCTGCGCGTCACGCGCGGTCCGGCCCTGCAGCCGGACCGGCTGCCGCCCGTCGACGCCGTCCTGCTGAGCCAC
GAGGACCACCCGGACAACCTCGACGACCTCGGCCGCCGCCTGCTCGACGGCCGCCGCGTCTTCACCACCCGCGAC
GGCGCCCGGAACCTCGGCCCCCGCCCGGGCCTCCTCGGCATGAGGCCCTGGGAGACCGGGACGCTGGCCGTCGGC
GGCAGGCGCTACGACATCACCGCCACGCCGTGCGTCCACGTTCCCGGCGGGGAGTGCGTCGGCTTCGTCGTCGGC
TCGTCCGCCTTCGGCCAGACCGGCGGCCTCCCCAACGCCATCTGGTTCTCGGGCGACACCGTCTACTTCGACGAG
CTCAGGCAGATCGGCTCCCGCTTCCACGTCAGCGTCGCCATCATGAACCTCGGCGCCGCCGCCGTGCCCGGCGGA
CCGCCCATCACCATGGGCGGCCGCGACGCTGCCCGCCTCTTCAAGGAGATTGGCGCCGACATCTTGGTGCCCATG
CACTTTGACTCGTGGGCTCACTTCGCTGAGGATAGGGCGGCACTCGCCAGGGCATTTGACGAGTCGGGCGTCCTG
GAAAGCGTTTGCTGGCTGGACCCCGGGAAGCCGAAGAAGGTCATCTAG
Gene >Hirsu2|7914
ATGGCCGCTGCCGCCTCGTCGACCTTCGGGAGCCCCCTCAGCATCACCTTCGTCGGCACGGCGACGGCCGTGCTC
GACATCGACGGCACCGCCATCCTCACCGACCCCTGCTTCTCGCCGGCCGGCCGCGTCCTCGACGTCGGCGCCTTC
ACCCTGCGCGTCACGCGCGGTCCGGCCCTGCAGCCGGACCGGCTGCCGCCCGTCGACGCCGTCCTGCTGAGCCAC
GAGGACCACCCGGACAACCTCGACGACCTCGGCCGCCGCCTGCTCGACGGCCGCCGCGTCTTCACCACCCGCGAC
GGCGCCCGGAACCTCGGCCCCCGCCCGGGCCTCCTCGGCATGAGGCCCTGGGAGACCGGGACGCTGGCCGTCGGC
GGCAGGCGCTACGACATCACCGCCACGCCGTGCGTCCACGTTCCCGGCGGGGAGTGCGTCGGCTTCGTCGTCGGC
TCGTCCGCCTTCGGCCAGACCGGCGGCCTCCCCAACGCCATCTGGTTCTCGGGCGACACCGTCTACTTCGACGAG
CTCAGGCAGATCGGCTCCCGCTTCCACGTCAGCGTCGCCATCATGAACCTCGGCGCCGCCGCCGTGCCCGGCGGA
CCGCCCATCACCATGGGCGGCCGCGACGCTGCCCGCCTCTTCAAGGAGATTGGCGCCGACATCTTGGTGCCCATG
CACTTTGACTCGTGGGCTCACTTCGCTGAGGATAGGGCGGCACTCGCCAGGGCATTTGACGAGTCGGGCGTCCTG
GAAAGCGTTTGCTGGCTGGACCCCGGGAAGCCGAAGAAGGTCATCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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