© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|79 |
| Gene name | |
| Location | Contig_101:7613..8839 |
| Strand | - |
| Gene length (bp) | 1226 |
| Transcript length (bp) | 492 |
| Coding sequence length (bp) | 492 |
| Protein length (aa) | 164 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | 0.5661 | 0.5661 | 0.4653 | 0.1857 | 0.335 | 0.0234 | 0.1048 | 0.0933 | 0.0883 | 0.1479 |
| Orthofinder run ID | 4 |
| Orthogroup | 7084 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|6348 |
| Ophiocordyceps subramaniannii | Hirsu2|79 (this protein) |
| Ophiocordyceps subramaniannii | Hirsu2|8427 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|79 MGTPVPKLRQQLYTIENQESFVARFTGDLLPDRRSIIHTARAPCCLTSSIQQVEQRPVNTGSGHANADRQDAVMR DTANETETDILDDFPEARDPAVSVTHAAERLIANQMEAQQAKLAVFRAFSTAFYQTADQFTSGHSLHALPTTFHA TFLATGTTRSTAR* |
| Coding | >Hirsu2|79 ATGGGCACCCCGGTGCCCAAACTACGTCAGCAGCTTTACACTATAGAAAATCAAGAGTCTTTCGTTGCCCGATTC ACAGGGGATCTTCTGCCCGATCGCCGCTCAATCATCCATACTGCCCGTGCCCCTTGTTGTCTGACATCCTCCATT CAGCAAGTCGAGCAGCGACCCGTGAACACTGGCAGCGGCCACGCCAACGCCGACCGCCAAGATGCTGTGATGAGA GACACAGCAAACGAAACCGAGACCGACATACTAGATGACTTTCCCGAGGCTCGAGACCCAGCAGTCAGTGTCACA CACGCGGCAGAAAGACTCATCGCCAACCAGATGGAAGCACAGCAGGCCAAGCTGGCCGTGTTCCGCGCCTTCTCC ACGGCCTTTTACCAAACGGCCGACCAATTCACATCGGGTCACTCGCTCCACGCTTTGCCAACGACTTTTCACGCG ACTTTCTTAGCTACTGGGACGACGCGCTCAACGGCCCGCTGA |
| Transcript | >Hirsu2|79 ATGGGCACCCCGGTGCCCAAACTACGTCAGCAGCTTTACACTATAGAAAATCAAGAGTCTTTCGTTGCCCGATTC ACAGGGGATCTTCTGCCCGATCGCCGCTCAATCATCCATACTGCCCGTGCCCCTTGTTGTCTGACATCCTCCATT CAGCAAGTCGAGCAGCGACCCGTGAACACTGGCAGCGGCCACGCCAACGCCGACCGCCAAGATGCTGTGATGAGA GACACAGCAAACGAAACCGAGACCGACATACTAGATGACTTTCCCGAGGCTCGAGACCCAGCAGTCAGTGTCACA CACGCGGCAGAAAGACTCATCGCCAACCAGATGGAAGCACAGCAGGCCAAGCTGGCCGTGTTCCGCGCCTTCTCC ACGGCCTTTTACCAAACGGCCGACCAATTCACATCGGGTCACTCGCTCCACGCTTTGCCAACGACTTTTCACGCG ACTTTCTTAGCTACTGGGACGACGCGCTCAACGGCCCGCTGA |
| Gene | >Hirsu2|79 ATGGGCACCCCGGTGCCCAAACTACGTCAGCAGCTTTACACTGTAAGGCGCTGCAACTTCAGCGCGTTTGCGCTT AATCCTAGTGCGTTCGCCAACCGAAATATTAGACGATCCAGTGCTGTATACTTATTCTACACTTTGGCGAGGATA CAATCTTTCTGCGTTAACGTCGAGCGAATGCAAGAGATCTTGTTCGCGGCTGTCCTCTTCAACCCTTTGCCAGAT CTCTTTCACCCCTTTGCTCTTATGCACCAAAGGATTCCCTCCCATCACCTCAGCGACCCGAACTTCGATGGGCTC GTCCTCTGCCTTGCTCCAATCCAGATACGCCATCATCTCTTCTTTCGTCCAATTTCTTGACCACGTCGAATTGAT ACAACGTTTGGACATCTGTTTGTAGTCCAAACACCATTCACAGCTCTGCTTGTCATATCTTTGTGGAAGTCCCAT TGCGCCACGGTATTGTTGGTTCGTCTTACCGCTACCGGCGGGCTGCGCCGCGTACCCAGAGAAGCGCTCCTTGGG CAGGTCGCACGCGACGGCCTCGCCGAGCTGCCGTCGCGACGACGCGCACAGCGGCCCGACGAAGCTCCTCTGTCA AGATCAGAACGCTCATTCACTGTGCTGCCTAGCAGGCAACAGGCAGTTCGTCATTCCGTATTAGTAACGAATTCG AACCTTCTAGGTGGCATCGTTATCTAGGCTGCCTGGGTGGCGACATCGCCACTCAACCATACATCACAAGTATAA GAAGTCAACTTCTCACCGTCACTCAGATAGAAAATCAAGAGTCTTTCGTTGCCCGATTCACAGGGGATCTTCTGC CCGATCGCCGCTCAATCATCCATACTGCCCGTGCCCCTTGTTGTCTGACATCCTCCATTCAGCAAGTCGAGCAGC GACCCGTGAACACTGGCAGCGGCCACGCCAACGCCGACCGCCAAGATGCTGTGATGAGAGACACAGCAAACGAAA CCGAGACCGACATACTAGATGACTTTCCCGAGGCTCGAGACCCAGCAGTCAGTGTCACACACGCGGCAGAAAGAC TCATCGCCAACCAGATGGAAGCACAGCAGGCCAAGCTGGCCGTGTTCCGCGCCTTCTCCACGGCCTTTTACCAAA CGGCCGACCAATTCACATCGGGTCACTCGCTCCACGCTTTGCCAACGACTTTTCACGCGACTTTCTTAGCTACTG GGACGACGCGCTCAACGGCCCGCTGA |