© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|7899 |
| Gene name | |
| Location | Contig_488:1444..2817 |
| Strand | - |
| Gene length (bp) | 1373 |
| Transcript length (bp) | 1302 |
| Coding sequence length (bp) | 1302 |
| Protein length (aa) | 434 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08426 | ICE2 | ICE2 | 1.2E-156 | 7 | 421 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O13909|YDW1_SCHPO | Uncharacterized protein C23C11.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC23C11.01 PE=4 SV=1 | 1 | 433 | 3.0E-49 |
| sp|P40499|ICE2_YEAST | Protein ICE2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ICE2 PE=1 SV=1 | 7 | 420 | 1.0E-39 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 21 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 2 | 24 | 22 |
| 2 | 34 | 53 | 19 |
| 3 | 66 | 88 | 22 |
| 4 | 139 | 161 | 22 |
| 5 | 174 | 196 | 22 |
| 6 | 206 | 225 | 19 |
| 7 | 232 | 249 | 17 |
| 8 | 303 | 325 | 22 |
| 9 | 359 | 381 | 22 |
| 10 | 401 | 423 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|7899 MWWLFSVLLSSVFLFSIVLSIPVAFDVGGRDSGLAYSLSLFNYYLLYSAVRIGTSDRSRLSSAVSAVLRLSQWIV IPTLMIWALGQFAVDAGSTNWVERTLGGVFRSKSTTWTEWVFGKDGVLETVMLGSWDNALKYSGPVFQLLEGFCT LLVIQAAGQITRWLVNRGRSDTWVIILLAFSGSIIASAVYFLWRVAQFPQISNLDATLIGIAMTTAVFLCAYGIG SGRGSPVESSLLFAYVVLCVYQIFTDYLPSDGTGQADEDQAAAQPDIPPLPPIIMASYSTLLHVLGSLPSAIHSS LALLYAAFQTITPSVIISLAYRLFVFYSATRIIPSVRDLGARALMHEPDFDDSETANKLLGFLSWFSPSILVAVY TSLLLQHFSTNDGPDGWTLRGGDVGGGTWRWINVGLTMVLYGVELYLGTNEQDHWKVD* |
| Coding | >Hirsu2|7899 ATGTGGTGGCTATTCAGCGTCCTCCTCAGCTCCGTCTTCCTCTTCAGCATCGTCCTCTCCATCCCCGTCGCCTTC GATGTCGGCGGCCGTGACAGCGGGCTGGCCTACAGCCTCTCGCTCTTCAACTACTATCTCCTCTACTCGGCCGTC CGCATCGGCACCTCGGACAGGTCGCGCCTCAGCTCCGCCGTCTCGGCCGTCCTGCGCCTGTCGCAGTGGATCGTC ATCCCGACGCTGATGATCTGGGCCCTCGGCCAGTTCGCCGTCGACGCCGGCAGCACCAACTGGGTCGAGAGAACG CTGGGCGGCGTCTTCCGCTCCAAGAGCACCACCTGGACCGAGTGGGTCTTCGGCAAGGACGGCGTGCTGGAGACG GTCATGCTGGGCAGCTGGGACAACGCCCTCAAGTACTCGGGCCCCGTCTTCCAGCTCCTCGAGGGCTTCTGCACC CTGCTCGTCATCCAGGCCGCCGGCCAGATCACCCGCTGGCTCGTCAACAGGGGGAGGAGTGACACGTGGGTGATC ATCCTCCTCGCCTTCTCCGGCTCCATCATCGCCAGCGCCGTCTATTTCCTTTGGCGCGTCGCGCAGTTCCCGCAG ATCAGTAACCTCGACGCCACCCTCATCGGCATCGCCATGACCACGGCCGTCTTCCTCTGCGCTTACGGCATCGGC AGCGGCCGCGGCAGTCCCGTCGAGAGCTCGCTGCTCTTCGCCTACGTCGTCCTCTGCGTCTACCAGATCTTCACC GACTACCTGCCGTCGGACGGGACCGGCCAGGCAGACGAGGACCAGGCGGCCGCGCAGCCAGACATCCCGCCCCTG CCGCCCATCATCATGGCCTCGTACTCGACCCTCCTCCACGTGCTCGGCTCGCTCCCCTCGGCCATCCACTCGTCG CTGGCCCTGCTCTACGCCGCCTTCCAGACCATCACGCCGTCCGTCATCATCTCGCTCGCCTATCGCCTCTTCGTC TTCTACTCGGCCACGCGCATCATCCCCTCGGTGCGCGACCTGGGCGCGCGCGCGCTGATGCACGAGCCGGACTTT GACGACTCGGAGACGGCCAACAAGCTCCTCGGCTTCCTCAGCTGGTTCTCGCCCTCGATCCTCGTGGCCGTCTAC ACGAGCCTGCTGCTGCAGCACTTCTCGACCAACGACGGGCCCGACGGCTGGACGCTCCGCGGCGGCGACGTCGGC GGCGGCACCTGGCGCTGGATCAACGTCGGCCTGACCATGGTGCTGTACGGCGTGGAGCTGTACCTGGGCACCAAC GAGCAGGACCACTGGAAGGTGGATTGA |
| Transcript | >Hirsu2|7899 ATGTGGTGGCTATTCAGCGTCCTCCTCAGCTCCGTCTTCCTCTTCAGCATCGTCCTCTCCATCCCCGTCGCCTTC GATGTCGGCGGCCGTGACAGCGGGCTGGCCTACAGCCTCTCGCTCTTCAACTACTATCTCCTCTACTCGGCCGTC CGCATCGGCACCTCGGACAGGTCGCGCCTCAGCTCCGCCGTCTCGGCCGTCCTGCGCCTGTCGCAGTGGATCGTC ATCCCGACGCTGATGATCTGGGCCCTCGGCCAGTTCGCCGTCGACGCCGGCAGCACCAACTGGGTCGAGAGAACG CTGGGCGGCGTCTTCCGCTCCAAGAGCACCACCTGGACCGAGTGGGTCTTCGGCAAGGACGGCGTGCTGGAGACG GTCATGCTGGGCAGCTGGGACAACGCCCTCAAGTACTCGGGCCCCGTCTTCCAGCTCCTCGAGGGCTTCTGCACC CTGCTCGTCATCCAGGCCGCCGGCCAGATCACCCGCTGGCTCGTCAACAGGGGGAGGAGTGACACGTGGGTGATC ATCCTCCTCGCCTTCTCCGGCTCCATCATCGCCAGCGCCGTCTATTTCCTTTGGCGCGTCGCGCAGTTCCCGCAG ATCAGTAACCTCGACGCCACCCTCATCGGCATCGCCATGACCACGGCCGTCTTCCTCTGCGCTTACGGCATCGGC AGCGGCCGCGGCAGTCCCGTCGAGAGCTCGCTGCTCTTCGCCTACGTCGTCCTCTGCGTCTACCAGATCTTCACC GACTACCTGCCGTCGGACGGGACCGGCCAGGCAGACGAGGACCAGGCGGCCGCGCAGCCAGACATCCCGCCCCTG CCGCCCATCATCATGGCCTCGTACTCGACCCTCCTCCACGTGCTCGGCTCGCTCCCCTCGGCCATCCACTCGTCG CTGGCCCTGCTCTACGCCGCCTTCCAGACCATCACGCCGTCCGTCATCATCTCGCTCGCCTATCGCCTCTTCGTC TTCTACTCGGCCACGCGCATCATCCCCTCGGTGCGCGACCTGGGCGCGCGCGCGCTGATGCACGAGCCGGACTTT GACGACTCGGAGACGGCCAACAAGCTCCTCGGCTTCCTCAGCTGGTTCTCGCCCTCGATCCTCGTGGCCGTCTAC ACGAGCCTGCTGCTGCAGCACTTCTCGACCAACGACGGGCCCGACGGCTGGACGCTCCGCGGCGGCGACGTCGGC GGCGGCACCTGGCGCTGGATCAACGTCGGCCTGACCATGGTGCTGTACGGCGTGGAGCTGTACCTGGGCACCAAC GAGCAGGACCACTGGAAGGTGGATTGA |
| Gene | >Hirsu2|7899 ATGTGGTGGCTATTCAGCGTCCTCCTCAGCTCCGTCTTCCTCTTCAGCATCGTCCTCTCCATCCCCGTCGCCTTC GATGTCGGCGGCCGTGACAGCGGGCTGGCCTACAGCCTCTCGCTCTTCAACTACTATCTCCTCTACTCGGCCGTC CGCATCGGCACCTCGGACAGGTCGCGCCTCAGCTCCGCCGTCTCGGCCGTCCTGCGCCTGTCGCAGTGGATCGTC ATCCCGACGCTGATGATCTGGGCCCTCGGCCAGTTCGCCGTCGACGCCGGCAGCACCAACTGGGTCGAGAGAACG CTGGGCGGCGTCTTCCGCTCCAAGAGCACCACCTGGACCGAGTGGGTCTTCGGCAAGGACGGCGTGCTGGAGACG GTCATGCTGGGCAGCTGGGACAACGCCCTCAAGTACTCGGGCCCCGTCTTCCAGCTCCTCGAGGGCTTCTGCACC CTGCTCGTCATCCAGGCCGCCGGCCAGATCACCCGCTGGCTCGTCAACAGGGGGAGGAGTGACACGTGGGTGGTG AGTCGCGCCTCTGTGCAGCCGAGGCGACTGGGTGATTTCTCGTCGGTTCGGTCGCTCATCTGCCACAGATCATCC TCCTCGCCTTCTCCGGCTCCATCATCGCCAGCGCCGTCTATTTCCTTTGGCGCGTCGCGCAGTTCCCGCAGATCA GTAACCTCGACGCCACCCTCATCGGCATCGCCATGACCACGGCCGTCTTCCTCTGCGCTTACGGCATCGGCAGCG GCCGCGGCAGTCCCGTCGAGAGCTCGCTGCTCTTCGCCTACGTCGTCCTCTGCGTCTACCAGATCTTCACCGACT ACCTGCCGTCGGACGGGACCGGCCAGGCAGACGAGGACCAGGCGGCCGCGCAGCCAGACATCCCGCCCCTGCCGC CCATCATCATGGCCTCGTACTCGACCCTCCTCCACGTGCTCGGCTCGCTCCCCTCGGCCATCCACTCGTCGCTGG CCCTGCTCTACGCCGCCTTCCAGACCATCACGCCGTCCGTCATCATCTCGCTCGCCTATCGCCTCTTCGTCTTCT ACTCGGCCACGCGCATCATCCCCTCGGTGCGCGACCTGGGCGCGCGCGCGCTGATGCACGAGCCGGACTTTGACG ACTCGGAGACGGCCAACAAGCTCCTCGGCTTCCTCAGCTGGTTCTCGCCCTCGATCCTCGTGGCCGTCTACACGA GCCTGCTGCTGCAGCACTTCTCGACCAACGACGGGCCCGACGGCTGGACGCTCCGCGGCGGCGACGTCGGCGGCG GCACCTGGCGCTGGATCAACGTCGGCCTGACCATGGTGCTGTACGGCGTGGAGCTGTACCTGGGCACCAACGAGC AGGACCACTGGAAGGTGGATTGA |