Protein ID | Hirsu2|7886 |
Gene name | |
Location | Contig_485:2752..3456 |
Strand | - |
Gene length (bp) | 704 |
Transcript length (bp) | 633 |
Coding sequence length (bp) | 633 |
Protein length (aa) | 211 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF05730 | CFEM | CFEM domain | 1.1E-11 | 20 | 85 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular|Cell membrane | 0.0706 | 0.0534 | 0.7925 | 0.5573 | 0.1067 | 0.0033 | 0.1716 | 0.1165 | 0.1555 | 0.0029 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 16 | 0.999731 |
Orthofinder run ID | 4 |
Orthogroup | 977 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|7886 MKTTLVALAVAGFAAAQDFSGQPACAVPCLAEAVPKIGCQIQDVACACKEENQQKLRGLVTSCILSKCKPDEAIK VQQAASAACAKAAGQTGASGSMSGTHSGSMTGSHTGAMSMTGSHTGSMHMTSMTGSSSMPTGAMSSSMSDSDSDD ASSTGSEMGGAMSSMMSSATNRAAGSSTRASAPGASSTGGAAAGPVGGAMAAILAAVLAL* |
Coding | >Hirsu2|7886 ATGAAGACTACTCTCGTCGCCCTCGCCGTCGCCGGCTTCGCCGCCGCCCAAGACTTCTCTGGCCAGCCCGCCTGC GCTGTTCCCTGCCTCGCGGAAGCCGTCCCCAAGATTGGCTGCCAGATACAGGATGTCGCCTGCGCCTGCAAGGAG GAGAATCAGCAGAAGCTCCGCGGCCTCGTCACCAGCTGCATCCTGTCCAAGTGCAAGCCCGATGAGGCGATCAAG GTCCAGCAGGCGGCCAGCGCTGCCTGCGCCAAGGCGGCCGGCCAGACGGGTGCCTCGGGCTCCATGTCGGGCACT CACTCGGGCTCCATGACGGGCTCTCACACGGGCGCCATGTCCATGACGGGCTCCCACACCGGCTCCATGCACATG ACGTCGATGACGGGTAGCAGCTCCATGCCCACGGGCGCCATGTCGAGCAGCATGTCCGACTCGGACTCGGACGAC GCCTCGTCGACGGGCTCGGAGATGGGCGGTGCCATGTCGAGCATGATGAGCTCCGCCACCAACCGTGCTGCCGGC TCCAGCACCCGCGCGTCGGCCCCTGGAGCCTCGAGCACGGGCGGTGCCGCCGCCGGCCCTGTCGGTGGTGCCATG GCCGCCATTTTGGCTGCCGTCCTGGCTCTGTAA |
Transcript | >Hirsu2|7886 ATGAAGACTACTCTCGTCGCCCTCGCCGTCGCCGGCTTCGCCGCCGCCCAAGACTTCTCTGGCCAGCCCGCCTGC GCTGTTCCCTGCCTCGCGGAAGCCGTCCCCAAGATTGGCTGCCAGATACAGGATGTCGCCTGCGCCTGCAAGGAG GAGAATCAGCAGAAGCTCCGCGGCCTCGTCACCAGCTGCATCCTGTCCAAGTGCAAGCCCGATGAGGCGATCAAG GTCCAGCAGGCGGCCAGCGCTGCCTGCGCCAAGGCGGCCGGCCAGACGGGTGCCTCGGGCTCCATGTCGGGCACT CACTCGGGCTCCATGACGGGCTCTCACACGGGCGCCATGTCCATGACGGGCTCCCACACCGGCTCCATGCACATG ACGTCGATGACGGGTAGCAGCTCCATGCCCACGGGCGCCATGTCGAGCAGCATGTCCGACTCGGACTCGGACGAC GCCTCGTCGACGGGCTCGGAGATGGGCGGTGCCATGTCGAGCATGATGAGCTCCGCCACCAACCGTGCTGCCGGC TCCAGCACCCGCGCGTCGGCCCCTGGAGCCTCGAGCACGGGCGGTGCCGCCGCCGGCCCTGTCGGTGGTGCCATG GCCGCCATTTTGGCTGCCGTCCTGGCTCTGTAA |
Gene | >Hirsu2|7886 ATGAAGACTACTCTCGTCGCCCTCGCCGTCGCCGGCTTCGCCGCCGCCCAAGACTTCTCTGGCCAGCCCGCCTGC GCTGTAAGACTTCCTTGTGCCGCCGTGGTGTTCGTCTGAGCTGCCTCACTGACCGCTCTCGTTGCGCCTAACAGG TTCCCTGCCTCGCGGAAGCCGTCCCCAAGATTGGCTGCCAGATACAGGATGTCGCCTGCGCCTGCAAGGAGGAGA ATCAGCAGAAGCTCCGCGGCCTCGTCACCAGCTGCATCCTGTCCAAGTGCAAGCCCGATGAGGCGATCAAGGTCC AGCAGGCGGCCAGCGCTGCCTGCGCCAAGGCGGCCGGCCAGACGGGTGCCTCGGGCTCCATGTCGGGCACTCACT CGGGCTCCATGACGGGCTCTCACACGGGCGCCATGTCCATGACGGGCTCCCACACCGGCTCCATGCACATGACGT CGATGACGGGTAGCAGCTCCATGCCCACGGGCGCCATGTCGAGCAGCATGTCCGACTCGGACTCGGACGACGCCT CGTCGACGGGCTCGGAGATGGGCGGTGCCATGTCGAGCATGATGAGCTCCGCCACCAACCGTGCTGCCGGCTCCA GCACCCGCGCGTCGGCCCCTGGAGCCTCGAGCACGGGCGGTGCCGCCGCCGGCCCTGTCGGTGGTGCCATGGCCG CCATTTTGGCTGCCGTCCTGGCTCTGTAA |