Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7886
Gene name
LocationContig_485:2752..3456
Strand-
Gene length (bp)704
Transcript length (bp)633
Coding sequence length (bp)633
Protein length (aa) 211

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05730 CFEM CFEM domain 1.1E-11 20 85

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular|Cell membrane 0.0706 0.0534 0.7925 0.5573 0.1067 0.0033 0.1716 0.1165 0.1555 0.0029

SignalP

SignalP signal predicted Location Score
Yes 1 - 16 0.999731

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup977
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6629
Ophiocordyceps australis map64 (Brazil) OphauB2|3088
Ophiocordyceps australis map64 (Brazil) OphauB2|6718
Ophiocordyceps camponoti-floridani Ophcf2|00850
Ophiocordyceps camponoti-rufipedis Ophun1|4489
Ophiocordyceps kimflemingae Ophio5|612
Ophiocordyceps subramaniannii Hirsu2|7886 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7886
MKTTLVALAVAGFAAAQDFSGQPACAVPCLAEAVPKIGCQIQDVACACKEENQQKLRGLVTSCILSKCKPDEAIK
VQQAASAACAKAAGQTGASGSMSGTHSGSMTGSHTGAMSMTGSHTGSMHMTSMTGSSSMPTGAMSSSMSDSDSDD
ASSTGSEMGGAMSSMMSSATNRAAGSSTRASAPGASSTGGAAAGPVGGAMAAILAAVLAL*
Coding >Hirsu2|7886
ATGAAGACTACTCTCGTCGCCCTCGCCGTCGCCGGCTTCGCCGCCGCCCAAGACTTCTCTGGCCAGCCCGCCTGC
GCTGTTCCCTGCCTCGCGGAAGCCGTCCCCAAGATTGGCTGCCAGATACAGGATGTCGCCTGCGCCTGCAAGGAG
GAGAATCAGCAGAAGCTCCGCGGCCTCGTCACCAGCTGCATCCTGTCCAAGTGCAAGCCCGATGAGGCGATCAAG
GTCCAGCAGGCGGCCAGCGCTGCCTGCGCCAAGGCGGCCGGCCAGACGGGTGCCTCGGGCTCCATGTCGGGCACT
CACTCGGGCTCCATGACGGGCTCTCACACGGGCGCCATGTCCATGACGGGCTCCCACACCGGCTCCATGCACATG
ACGTCGATGACGGGTAGCAGCTCCATGCCCACGGGCGCCATGTCGAGCAGCATGTCCGACTCGGACTCGGACGAC
GCCTCGTCGACGGGCTCGGAGATGGGCGGTGCCATGTCGAGCATGATGAGCTCCGCCACCAACCGTGCTGCCGGC
TCCAGCACCCGCGCGTCGGCCCCTGGAGCCTCGAGCACGGGCGGTGCCGCCGCCGGCCCTGTCGGTGGTGCCATG
GCCGCCATTTTGGCTGCCGTCCTGGCTCTGTAA
Transcript >Hirsu2|7886
ATGAAGACTACTCTCGTCGCCCTCGCCGTCGCCGGCTTCGCCGCCGCCCAAGACTTCTCTGGCCAGCCCGCCTGC
GCTGTTCCCTGCCTCGCGGAAGCCGTCCCCAAGATTGGCTGCCAGATACAGGATGTCGCCTGCGCCTGCAAGGAG
GAGAATCAGCAGAAGCTCCGCGGCCTCGTCACCAGCTGCATCCTGTCCAAGTGCAAGCCCGATGAGGCGATCAAG
GTCCAGCAGGCGGCCAGCGCTGCCTGCGCCAAGGCGGCCGGCCAGACGGGTGCCTCGGGCTCCATGTCGGGCACT
CACTCGGGCTCCATGACGGGCTCTCACACGGGCGCCATGTCCATGACGGGCTCCCACACCGGCTCCATGCACATG
ACGTCGATGACGGGTAGCAGCTCCATGCCCACGGGCGCCATGTCGAGCAGCATGTCCGACTCGGACTCGGACGAC
GCCTCGTCGACGGGCTCGGAGATGGGCGGTGCCATGTCGAGCATGATGAGCTCCGCCACCAACCGTGCTGCCGGC
TCCAGCACCCGCGCGTCGGCCCCTGGAGCCTCGAGCACGGGCGGTGCCGCCGCCGGCCCTGTCGGTGGTGCCATG
GCCGCCATTTTGGCTGCCGTCCTGGCTCTGTAA
Gene >Hirsu2|7886
ATGAAGACTACTCTCGTCGCCCTCGCCGTCGCCGGCTTCGCCGCCGCCCAAGACTTCTCTGGCCAGCCCGCCTGC
GCTGTAAGACTTCCTTGTGCCGCCGTGGTGTTCGTCTGAGCTGCCTCACTGACCGCTCTCGTTGCGCCTAACAGG
TTCCCTGCCTCGCGGAAGCCGTCCCCAAGATTGGCTGCCAGATACAGGATGTCGCCTGCGCCTGCAAGGAGGAGA
ATCAGCAGAAGCTCCGCGGCCTCGTCACCAGCTGCATCCTGTCCAAGTGCAAGCCCGATGAGGCGATCAAGGTCC
AGCAGGCGGCCAGCGCTGCCTGCGCCAAGGCGGCCGGCCAGACGGGTGCCTCGGGCTCCATGTCGGGCACTCACT
CGGGCTCCATGACGGGCTCTCACACGGGCGCCATGTCCATGACGGGCTCCCACACCGGCTCCATGCACATGACGT
CGATGACGGGTAGCAGCTCCATGCCCACGGGCGCCATGTCGAGCAGCATGTCCGACTCGGACTCGGACGACGCCT
CGTCGACGGGCTCGGAGATGGGCGGTGCCATGTCGAGCATGATGAGCTCCGCCACCAACCGTGCTGCCGGCTCCA
GCACCCGCGCGTCGGCCCCTGGAGCCTCGAGCACGGGCGGTGCCGCCGCCGGCCCTGTCGGTGGTGCCATGGCCG
CCATTTTGGCTGCCGTCCTGGCTCTGTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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