Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7879
Gene name
LocationContig_484:7138..7537
Strand+
Gene length (bp)399
Transcript length (bp)330
Coding sequence length (bp)330
Protein length (aa) 110

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.0893 0.0485 0.9571 0.055 0.1083 0.0121 0.074 0.0836 0.0277 0.003

SignalP

SignalP signal predicted Location Score
Yes 1 - 16 0.999609

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup7682
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|7640
Ophiocordyceps subramaniannii Hirsu2|7879 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7879
MKSASIIALCCGLASAASVKKPIESPESWAKRQCEELQNPAGCTVERVIECHGEILSRGIETAVKEKKNVIEELK
AKETTEWVTANNLSKCLAGEEFMSGPAFKAPAEK*
Coding >Hirsu2|7879
ATGAAGTCTGCCTCGATCATTGCCCTGTGCTGCGGCCTGGCTTCAGCCGCTTCCGTCAAGAAGCCGATCGAGAGC
CCGGAAAGCTGGGCAAAGAGGCAGTGCGAAGAGCTTCAGAACCCGGCCGGCTGTACCGTGGAGCGGGTGATCGAA
TGCCATGGTGAAATTCTGAGCCGGGGAATCGAGACAGCAGTCAAGGAGAAGAAGAATGTGATTGAGGAGTTGAAA
GCCAAGGAAACCACGGAATGGGTGACGGCGAATAACCTGTCTAAGTGCCTGGCGGGAGAGGAATTCATGTCCGGC
CCGGCTTTCAAGGCTCCGGCCGAGAAATGA
Transcript >Hirsu2|7879
ATGAAGTCTGCCTCGATCATTGCCCTGTGCTGCGGCCTGGCTTCAGCCGCTTCCGTCAAGAAGCCGATCGAGAGC
CCGGAAAGCTGGGCAAAGAGGCAGTGCGAAGAGCTTCAGAACCCGGCCGGCTGTACCGTGGAGCGGGTGATCGAA
TGCCATGGTGAAATTCTGAGCCGGGGAATCGAGACAGCAGTCAAGGAGAAGAAGAATGTGATTGAGGAGTTGAAA
GCCAAGGAAACCACGGAATGGGTGACGGCGAATAACCTGTCTAAGTGCCTGGCGGGAGAGGAATTCATGTCCGGC
CCGGCTTTCAAGGCTCCGGCCGAGAAATGA
Gene >Hirsu2|7879
ATGAAGTCTGCCTCGATCATTGCCCTGTGCTGCGGCCTGGCTTCAGCCGCTTCCGTCAAGAAGCCGATCGAGAGC
CCGGAAAGCGTACGTCGCAGTCGAGTGGTCCTGCCTATAACGTGGATGCTGATAAGGAATTTCTTTACGAATATT
TAGTGGGCAAAGAGGCAGTGCGAAGAGCTTCAGAACCCGGCCGGCTGTACCGTGGAGCGGGTGATCGAATGCCAT
GGTGAAATTCTGAGCCGGGGAATCGAGACAGCAGTCAAGGAGAAGAAGAATGTGATTGAGGAGTTGAAAGCCAAG
GAAACCACGGAATGGGTGACGGCGAATAACCTGTCTAAGTGCCTGGCGGGAGAGGAATTCATGTCCGGCCCGGCT
TTCAAGGCTCCGGCCGAGAAATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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