Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7871
Gene name
LocationContig_483:6194..7652
Strand-
Gene length (bp)1458
Transcript length (bp)1398
Coding sequence length (bp)1398
Protein length (aa) 466

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01073 3Beta_HSD 3-beta hydroxysteroid dehydrogenase/isomerase family 1.2E-10 73 203
PF01073 3Beta_HSD 3-beta hydroxysteroid dehydrogenase/isomerase family 1.5E-10 241 350
PF07993 NAD_binding_4 Male sterility protein 1.0E-08 150 275
PF01370 Epimerase NAD dependent epimerase/dehydratase family 3.5E-06 73 291

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P14893|3BHS_BOVIN 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase OS=Bos taurus GN=HSD3B PE=1 SV=2 73 453 3.0E-12
sp|A8DZE7|D42E1_DANRE Short-chain dehydrogenase/reductase family 42E member 1 OS=Danio rerio GN=sdr42e1 PE=2 SV=1 67 465 5.0E-12
sp|Q9EQC1|3BHS7_MOUSE 3 beta-hydroxysteroid dehydrogenase type 7 OS=Mus musculus GN=Hsd3b7 PE=1 SV=1 72 459 1.0E-11
sp|Q9D665|D42E1_MOUSE Short-chain dehydrogenase/reductase family 42E member 1 OS=Mus musculus GN=Sdr42e1 PE=1 SV=1 73 389 5.0E-11
sp|Q8WUS8|D42E1_HUMAN Short-chain dehydrogenase/reductase family 42E member 1 OS=Homo sapiens GN=SDR42E1 PE=2 SV=2 64 389 1.0E-10
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Swissprot ID Swissprot Description Start End E-value
sp|P14893|3BHS_BOVIN 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase OS=Bos taurus GN=HSD3B PE=1 SV=2 73 453 3.0E-12
sp|A8DZE7|D42E1_DANRE Short-chain dehydrogenase/reductase family 42E member 1 OS=Danio rerio GN=sdr42e1 PE=2 SV=1 67 465 5.0E-12
sp|Q9EQC1|3BHS7_MOUSE 3 beta-hydroxysteroid dehydrogenase type 7 OS=Mus musculus GN=Hsd3b7 PE=1 SV=1 72 459 1.0E-11
sp|Q9D665|D42E1_MOUSE Short-chain dehydrogenase/reductase family 42E member 1 OS=Mus musculus GN=Sdr42e1 PE=1 SV=1 73 389 5.0E-11
sp|Q8WUS8|D42E1_HUMAN Short-chain dehydrogenase/reductase family 42E member 1 OS=Homo sapiens GN=SDR42E1 PE=2 SV=2 64 389 1.0E-10
sp|Q0IH73|D42E1_XENLA Short-chain dehydrogenase/reductase family 42E member 1 OS=Xenopus laevis GN=sdr42e1 PE=2 SV=1 67 341 2.0E-10
sp|Q32L94|D42E1_BOVIN Short-chain dehydrogenase/reductase family 42E member 1 OS=Bos taurus GN=SDR42E1 PE=2 SV=2 73 389 2.0E-10
sp|Q4R7R1|D42E1_MACFA Short-chain dehydrogenase/reductase family 42E member 1 OS=Macaca fascicularis GN=SDR42E1 PE=2 SV=1 64 389 4.0E-10
sp|P9WQP7|3BHS_MYCTU 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv1106c PE=1 SV=1 71 290 7.0E-08
sp|P9WQP6|3BHS_MYCTO 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT1137 PE=3 SV=1 71 290 7.0E-08
sp|O35048|3BHS7_RAT 3 beta-hydroxysteroid dehydrogenase type 7 OS=Rattus norvegicus GN=Hsd3b7 PE=2 SV=1 72 459 4.0E-07
sp|Q9H2F3|3BHS7_HUMAN 3 beta-hydroxysteroid dehydrogenase type 7 OS=Homo sapiens GN=HSD3B7 PE=1 SV=2 72 439 1.0E-06
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GO

GO Term Description Terminal node
GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity Yes
GO:0006694 steroid biosynthetic process Yes
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Yes
GO:1901360 organic cyclic compound metabolic process No
GO:0008150 biological_process No
GO:0009058 biosynthetic process No
GO:0003824 catalytic activity No
GO:0071704 organic substance metabolic process No
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors No
GO:0006629 lipid metabolic process No
GO:0008152 metabolic process No
GO:1901576 organic substance biosynthetic process No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0016491 oxidoreductase activity No
GO:0016229 steroid dehydrogenase activity No
GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor No
GO:0008202 steroid metabolic process No
GO:0008610 lipid biosynthetic process No
GO:0044238 primary metabolic process No
GO:0003674 molecular_function No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Endoplasmic reticulum Signal peptide 0.1447 0.1737 0.4217 0.0766 0.6142 0.097 0.7704 0.2376 0.2332 0.1948

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 5 22 17
2 72 94 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6753
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-floridani Ophcf2|00219
Ophiocordyceps camponoti-rufipedis Ophun1|6239
Ophiocordyceps kimflemingae Ophio5|5888
Ophiocordyceps subramaniannii Hirsu2|7871 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7871
MSATTVALLLLAAGLVLYGVRVNHVMLQTPPEAQAYLEPPLTADRVRQVYRRVKEQGIDWHAGLPPRRDRRYVIV
GGSGLVGGQIALSLLAVGVPPQAIRLLDIRPPTRSEFSSGAAAQVAFVKTDVTSEAEVESGMGASWAASVSGLPL
TVFHTAAVIRPQERDPVLYHRCSRVNVAGTAHALSAARKAGAGLFILTSSSNAGSRGVQWLFPPWRRQPRHFAQF
IGDDDFSAGRPGRAAHEFPSNYAASKAEAERLVCGSDAAEMRTAAIRPGNGVYGHRDDHIIAQMLGRPRMPTFAA
PWAQSWAHVGNVALAHLLLEAALLGPKADKVAGRPFMISDGGAPLRFRDVYTVLGATASTGFSVSHPPPVAMLLL
AYGVEAYCRLLARLPARLQGLVPEPGEPLCMLQPGTIASSVTSITDTSTARRRPDEGGLGYRPLCTTLEGLCAQV
RDWNEWVEAGGREER*
Coding >Hirsu2|7871
ATGAGCGCAACGACGGTCGCCCTGCTGCTCCTCGCGGCGGGCCTGGTGCTGTACGGCGTGCGGGTCAACCATGTC
ATGCTTCAGACTCCTCCCGAGGCTCAGGCCTACCTCGAGCCGCCCTTGACAGCGGATCGCGTTCGGCAGGTTTAC
CGACGGGTCAAGGAGCAGGGCATTGACTGGCATGCCGGCCTGCCGCCGCGGAGAGACAGGCGCTACGTCATCGTG
GGAGGCTCCGGGCTCGTGGGCGGGCAGATAGCTCTGAGCCTGCTGGCGGTGGGGGTGCCCCCGCAGGCCATCCGG
CTGCTCGACATTCGGCCGCCGACGCGGTCCGAGTTCTCGTCGGGCGCGGCGGCGCAGGTGGCCTTCGTCAAGACG
GACGTCACGTCCGAGGCCGAGGTCGAGAGCGGCATGGGGGCGTCGTGGGCAGCATCCGTCTCGGGCCTGCCGCTG
ACCGTCTTCCACACGGCGGCGGTAATCCGGCCGCAGGAGCGGGACCCGGTCTTGTACCACCGGTGCTCGCGCGTC
AACGTCGCCGGCACGGCGCACGCGCTGTCGGCGGCGCGCAAGGCGGGCGCGGGCCTCTTCATCCTCACGTCGAGC
TCCAACGCGGGCTCGAGGGGCGTGCAGTGGCTGTTCCCGCCGTGGAGGCGGCAGCCGCGGCACTTTGCGCAGTTC
ATCGGTGACGACGACTTCTCGGCCGGGCGACCGGGGCGGGCGGCGCACGAGTTCCCCAGCAACTACGCCGCGTCC
AAGGCGGAGGCGGAGCGGCTGGTGTGCGGGTCGGACGCGGCGGAGATGCGGACGGCGGCGATCCGGCCGGGCAAC
GGCGTCTACGGCCACCGCGACGACCACATCATCGCGCAGATGCTGGGGCGGCCGCGGATGCCGACGTTCGCGGCG
CCGTGGGCGCAGAGCTGGGCGCACGTCGGCAACGTGGCGCTGGCGCACCTGCTGCTCGAGGCGGCGCTGCTGGGC
CCGAAGGCGGACAAGGTGGCCGGGCGGCCGTTCATGATCTCGGACGGGGGCGCGCCGCTGCGCTTCCGCGACGTG
TACACGGTGCTGGGCGCGACGGCTTCGACGGGCTTCAGCGTCAGCCACCCGCCGCCGGTGGCGATGCTGCTGCTG
GCGTACGGCGTCGAGGCCTACTGCCGGCTGCTGGCGCGGCTGCCGGCGCGGCTGCAGGGCCTCGTGCCCGAGCCG
GGCGAGCCGCTGTGCATGCTGCAGCCGGGGACGATTGCGTCGTCGGTCACGTCCATCACCGACACGTCGACGGCC
CGGAGGCGGCCGGACGAGGGCGGGCTGGGCTACCGGCCGCTGTGCACGACGCTCGAGGGGCTCTGCGCCCAGGTC
CGCGACTGGAACGAATGGGTCGAGGCGGGCGGGCGAGAGGAGAGGTGA
Transcript >Hirsu2|7871
ATGAGCGCAACGACGGTCGCCCTGCTGCTCCTCGCGGCGGGCCTGGTGCTGTACGGCGTGCGGGTCAACCATGTC
ATGCTTCAGACTCCTCCCGAGGCTCAGGCCTACCTCGAGCCGCCCTTGACAGCGGATCGCGTTCGGCAGGTTTAC
CGACGGGTCAAGGAGCAGGGCATTGACTGGCATGCCGGCCTGCCGCCGCGGAGAGACAGGCGCTACGTCATCGTG
GGAGGCTCCGGGCTCGTGGGCGGGCAGATAGCTCTGAGCCTGCTGGCGGTGGGGGTGCCCCCGCAGGCCATCCGG
CTGCTCGACATTCGGCCGCCGACGCGGTCCGAGTTCTCGTCGGGCGCGGCGGCGCAGGTGGCCTTCGTCAAGACG
GACGTCACGTCCGAGGCCGAGGTCGAGAGCGGCATGGGGGCGTCGTGGGCAGCATCCGTCTCGGGCCTGCCGCTG
ACCGTCTTCCACACGGCGGCGGTAATCCGGCCGCAGGAGCGGGACCCGGTCTTGTACCACCGGTGCTCGCGCGTC
AACGTCGCCGGCACGGCGCACGCGCTGTCGGCGGCGCGCAAGGCGGGCGCGGGCCTCTTCATCCTCACGTCGAGC
TCCAACGCGGGCTCGAGGGGCGTGCAGTGGCTGTTCCCGCCGTGGAGGCGGCAGCCGCGGCACTTTGCGCAGTTC
ATCGGTGACGACGACTTCTCGGCCGGGCGACCGGGGCGGGCGGCGCACGAGTTCCCCAGCAACTACGCCGCGTCC
AAGGCGGAGGCGGAGCGGCTGGTGTGCGGGTCGGACGCGGCGGAGATGCGGACGGCGGCGATCCGGCCGGGCAAC
GGCGTCTACGGCCACCGCGACGACCACATCATCGCGCAGATGCTGGGGCGGCCGCGGATGCCGACGTTCGCGGCG
CCGTGGGCGCAGAGCTGGGCGCACGTCGGCAACGTGGCGCTGGCGCACCTGCTGCTCGAGGCGGCGCTGCTGGGC
CCGAAGGCGGACAAGGTGGCCGGGCGGCCGTTCATGATCTCGGACGGGGGCGCGCCGCTGCGCTTCCGCGACGTG
TACACGGTGCTGGGCGCGACGGCTTCGACGGGCTTCAGCGTCAGCCACCCGCCGCCGGTGGCGATGCTGCTGCTG
GCGTACGGCGTCGAGGCCTACTGCCGGCTGCTGGCGCGGCTGCCGGCGCGGCTGCAGGGCCTCGTGCCCGAGCCG
GGCGAGCCGCTGTGCATGCTGCAGCCGGGGACGATTGCGTCGTCGGTCACGTCCATCACCGACACGTCGACGGCC
CGGAGGCGGCCGGACGAGGGCGGGCTGGGCTACCGGCCGCTGTGCACGACGCTCGAGGGGCTCTGCGCCCAGGTC
CGCGACTGGAACGAATGGGTCGAGGCGGGCGGGCGAGAGGAGAGGTGA
Gene >Hirsu2|7871
ATGAGCGCAACGACGGTCGCCCTGCTGCTCCTCGCGGCGGGCCTGGTGCTGTACGGCGTGCGGGTCAACCATGTC
ATGCTTCAGACTCCTCCCGAGGCTCAGGCCTACCTCGAGCCGCCCTTGACAGCGGATCGCGTTCGGCAGGTTTAC
CGACGGGTCAAGGAGCAGGGCATTGACTGGCATGCCGGCCTGCCGCCGCGGAGAGACAGGCGCTACGTCATCGTG
GGAGGCTCCGGTGAGTTTCATGCGCTAGGCCGAGCTGCGCCGGAGACGCGAGCGCTGACCGCGCGTCCAGGGCTC
GTGGGCGGGCAGATAGCTCTGAGCCTGCTGGCGGTGGGGGTGCCCCCGCAGGCCATCCGGCTGCTCGACATTCGG
CCGCCGACGCGGTCCGAGTTCTCGTCGGGCGCGGCGGCGCAGGTGGCCTTCGTCAAGACGGACGTCACGTCCGAG
GCCGAGGTCGAGAGCGGCATGGGGGCGTCGTGGGCAGCATCCGTCTCGGGCCTGCCGCTGACCGTCTTCCACACG
GCGGCGGTAATCCGGCCGCAGGAGCGGGACCCGGTCTTGTACCACCGGTGCTCGCGCGTCAACGTCGCCGGCACG
GCGCACGCGCTGTCGGCGGCGCGCAAGGCGGGCGCGGGCCTCTTCATCCTCACGTCGAGCTCCAACGCGGGCTCG
AGGGGCGTGCAGTGGCTGTTCCCGCCGTGGAGGCGGCAGCCGCGGCACTTTGCGCAGTTCATCGGTGACGACGAC
TTCTCGGCCGGGCGACCGGGGCGGGCGGCGCACGAGTTCCCCAGCAACTACGCCGCGTCCAAGGCGGAGGCGGAG
CGGCTGGTGTGCGGGTCGGACGCGGCGGAGATGCGGACGGCGGCGATCCGGCCGGGCAACGGCGTCTACGGCCAC
CGCGACGACCACATCATCGCGCAGATGCTGGGGCGGCCGCGGATGCCGACGTTCGCGGCGCCGTGGGCGCAGAGC
TGGGCGCACGTCGGCAACGTGGCGCTGGCGCACCTGCTGCTCGAGGCGGCGCTGCTGGGCCCGAAGGCGGACAAG
GTGGCCGGGCGGCCGTTCATGATCTCGGACGGGGGCGCGCCGCTGCGCTTCCGCGACGTGTACACGGTGCTGGGC
GCGACGGCTTCGACGGGCTTCAGCGTCAGCCACCCGCCGCCGGTGGCGATGCTGCTGCTGGCGTACGGCGTCGAG
GCCTACTGCCGGCTGCTGGCGCGGCTGCCGGCGCGGCTGCAGGGCCTCGTGCCCGAGCCGGGCGAGCCGCTGTGC
ATGCTGCAGCCGGGGACGATTGCGTCGTCGGTCACGTCCATCACCGACACGTCGACGGCCCGGAGGCGGCCGGAC
GAGGGCGGGCTGGGCTACCGGCCGCTGTGCACGACGCTCGAGGGGCTCTGCGCCCAGGTCCGCGACTGGAACGAA
TGGGTCGAGGCGGGCGGGCGAGAGGAGAGGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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