Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7846
Gene name
LocationContig_48:33208..35704
Strand+
Gene length (bp)2496
Transcript length (bp)2496
Coding sequence length (bp)2496
Protein length (aa) 832

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07522 DRMBL DNA repair metallo-beta-lactamase 1.3E-36 638 770
PF12706 Lactamase_B_2 Beta-lactamase superfamily domain 4.5E-07 382 512

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q10264|PSO2_SCHPO DNA cross-link repair protein pso2/snm1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pso2 PE=3 SV=3 234 795 3.0E-122
sp|Q38961|SNM1_ARATH DNA cross-link repair protein SNM1 OS=Arabidopsis thaliana GN=SNM1 PE=2 SV=1 308 786 6.0E-74
sp|Q9JIC3|DCR1A_MOUSE DNA cross-link repair 1A protein OS=Mus musculus GN=Dclre1a PE=1 SV=2 348 788 3.0E-73
sp|Q5QJC4|DCR1A_CHICK DNA cross-link repair 1A protein OS=Gallus gallus GN=DCLRE1A PE=1 SV=1 345 788 3.0E-73
sp|Q6PJP8|DCR1A_HUMAN DNA cross-link repair 1A protein OS=Homo sapiens GN=DCLRE1A PE=1 SV=3 355 788 1.0E-71
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Swissprot ID Swissprot Description Start End E-value
sp|Q10264|PSO2_SCHPO DNA cross-link repair protein pso2/snm1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pso2 PE=3 SV=3 234 795 3.0E-122
sp|Q38961|SNM1_ARATH DNA cross-link repair protein SNM1 OS=Arabidopsis thaliana GN=SNM1 PE=2 SV=1 308 786 6.0E-74
sp|Q9JIC3|DCR1A_MOUSE DNA cross-link repair 1A protein OS=Mus musculus GN=Dclre1a PE=1 SV=2 348 788 3.0E-73
sp|Q5QJC4|DCR1A_CHICK DNA cross-link repair 1A protein OS=Gallus gallus GN=DCLRE1A PE=1 SV=1 345 788 3.0E-73
sp|Q6PJP8|DCR1A_HUMAN DNA cross-link repair 1A protein OS=Homo sapiens GN=DCLRE1A PE=1 SV=3 355 788 1.0E-71
sp|P30620|PSO2_YEAST DNA cross-link repair protein PSO2/SNM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PSO2 PE=1 SV=1 242 790 2.0E-58
sp|Q86KS1|DCR1_DICDI DNA cross-link repair 1 protein OS=Dictyostelium discoideum GN=dclre1 PE=3 SV=1 346 771 2.0E-46
sp|Q5QJC3|DCR1B_CHICK 5' exonuclease Apollo OS=Gallus gallus GN=DCLRE1B PE=2 SV=1 363 768 1.0E-28
sp|D2H8V8|DCR1B_AILME 5' exonuclease Apollo OS=Ailuropoda melanoleuca GN=DCLRE1B PE=3 SV=1 363 768 8.0E-27
sp|Q9H816|DCR1B_HUMAN 5' exonuclease Apollo OS=Homo sapiens GN=DCLRE1B PE=1 SV=1 363 768 2.0E-26
sp|Q4KLY6|DCR1B_RAT 5' exonuclease Apollo OS=Rattus norvegicus GN=Dclre1b PE=1 SV=2 363 767 1.0E-24
sp|Q8C7W7|DCR1B_MOUSE 5' exonuclease Apollo OS=Mus musculus GN=Dclre1b PE=1 SV=2 363 768 4.0E-24
sp|B0V2S2|DCR1B_DANRE 5' exonuclease Apollo OS=Danio rerio GN=dclre1b PE=2 SV=1 362 638 4.0E-24
sp|Q5QJC2|DCR1C_CHICK Protein artemis OS=Gallus gallus GN=DCLRE1C PE=2 SV=1 369 583 6.0E-15
sp|Q5XIX3|DCR1C_RAT Protein artemis OS=Rattus norvegicus GN=Dclre1c PE=1 SV=1 368 581 7.0E-14
sp|Q8K4J0|DCR1C_MOUSE Protein artemis OS=Mus musculus GN=Dclre1c PE=1 SV=2 368 581 3.0E-13
sp|Q5R6Z9|DCR1C_PONAB Protein artemis OS=Pongo abelii GN=DCLRE1C PE=2 SV=1 368 581 7.0E-13
sp|Q96SD1|DCR1C_HUMAN Protein artemis OS=Homo sapiens GN=DCLRE1C PE=1 SV=2 368 581 7.0E-13
sp|Q5RGE5|DCR1C_DANRE Protein artemis OS=Danio rerio GN=dclre1c PE=2 SV=1 384 568 1.0E-11
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 43 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7846
MVTSTKINRSNPPRKPANSAHVSKKPVKPNASILSFFQKTQKQEESLFVGAAPAVATCDDDIYSADESESPAKKR
RLSRGPLDTVGSADAQKTAHENASRDEKSRVRTNLPFIIDSDSEDDDDEAAQSPVAKPETPDTPSKASTDSARHG
QPPQETTNGRELETGDKIPPPQVEDSTCARLEGPEGLDDVDGLDMEDFEGEEMRERRFMWEQARLEAEEEGFQLP
EDLADEPPDDGSMAESCPICNGSLAGVSPDEATRHVNSCLDGNPIPLPAQKKASSSAAQSEVDSTEIGKRFARAA
IPRPAQASPFEMDGSDNKRPSKSAFSKLMSNKAEDSAWATAAATEHASRGRPAYERTCPFYKIIPGFNICVDAFR
YGAVQGCEAYFLSHFHSDHYIGLTANWRHGPIYCSKVTGSLVRKQLRTAAQWVVELEFDRPYDVPGTGASVTMIP
ANHCPGSSLFLFQKPSGAGPDAGTRRILHCGDFRACPDHVRHPLLRPDVVDSITGKRRNQTIHMCYLDTTYLNPR
YSFPPQDQVIKACADLCASMSPDPQCKDDVWEQSAKASGSQAVSKYFHSGKSEDAGGKSGSGPKRGQRLLVVCGT
YSIGKERICIAIAKALKTKIFAGPAKMRICKQLDDADLASLLTSDPVEAQVHMQSLMEIRAETLKDYLASYKPHF
SRVVGFRPSGWTFRPAGGKPTAANTAPSSIPTQQLLHGKGWRTRFGYRDFVAQRGSTREAMCFGVPYSEHSSFRE
LAMFVMGLRIDKVIPTVNVGSEQSRKRMKGWIDRWVAERKRGGLVRPLVEGEDGEGDGDGDGDSGPELWDGKTAQ
GGGAWW*
Coding >Hirsu2|7846
ATGGTCACCTCGACCAAGATCAATCGGTCCAATCCGCCGAGAAAGCCGGCCAACAGCGCGCACGTCTCCAAGAAG
CCGGTCAAACCAAACGCGAGCATCCTCAGTTTCTTTCAGAAAACGCAAAAGCAGGAGGAATCTCTTTTCGTCGGG
GCCGCCCCGGCTGTGGCAACTTGCGATGACGACATCTACAGCGCCGACGAGTCCGAGTCGCCGGCCAAGAAGAGG
CGATTGTCTCGAGGGCCCCTCGATACCGTGGGGTCGGCCGATGCCCAAAAAACCGCCCATGAGAATGCTTCCCGA
GACGAAAAGTCGAGGGTCCGCACCAACCTTCCTTTCATAATCGACTCCGATAGCGAAGACGACGATGACGAGGCC
GCGCAGAGCCCGGTCGCGAAACCAGAGACCCCTGACACGCCTTCCAAGGCATCAACTGACTCGGCCCGGCACGGT
CAACCGCCACAGGAGACAACCAATGGTCGCGAGCTCGAGACGGGGGACAAGATTCCTCCGCCCCAAGTAGAGGAT
TCAACGTGTGCACGGCTCGAGGGACCCGAGGGGCTCGACGACGTCGATGGTCTGGACATGGAGGATTTCGAAGGC
GAGGAAATGCGGGAAAGGAGGTTCATGTGGGAGCAGGCCCGTCTCGAGGCCGAGGAGGAGGGATTCCAGCTCCCC
GAGGACCTGGCCGACGAGCCTCCAGACGATGGAAGCATGGCTGAGAGCTGTCCGATATGCAATGGAAGCCTGGCC
GGTGTCTCCCCCGACGAGGCGACGCGCCACGTCAACTCGTGTCTCGACGGCAACCCCATCCCGCTGCCGGCGCAA
AAGAAGGCTTCTTCGTCGGCGGCGCAGTCTGAGGTCGATTCCACCGAGATTGGCAAGCGATTTGCCCGGGCCGCC
ATCCCTCGGCCGGCGCAGGCCAGCCCATTCGAAATGGACGGCAGCGACAACAAGCGGCCGTCCAAGTCGGCCTTC
TCCAAGCTCATGTCCAACAAGGCCGAGGACTCGGCCTGGGCCACGGCGGCGGCAACGGAGCACGCCTCTCGCGGG
CGACCCGCCTACGAGCGGACCTGTCCCTTTTACAAAATCATCCCCGGCTTCAACATCTGCGTCGACGCCTTCCGG
TACGGCGCCGTCCAGGGATGCGAGGCCTACTTCCTCAGCCACTTCCACAGCGACCACTACATTGGCCTGACGGCC
AACTGGAGGCACGGCCCCATCTACTGCAGCAAAGTGACCGGGAGCCTGGTGAGGAAGCAGCTGCGGACCGCGGCC
CAATGGGTCGTCGAGCTCGAGTTCGACAGGCCCTACGACGTTCCGGGAACGGGAGCCAGCGTGACCATGATACCG
GCCAACCACTGCCCGGGGAGCTCCCTGTTCCTCTTCCAAAAGCCGTCGGGCGCAGGCCCCGACGCCGGGACGCGG
CGAATCCTGCACTGCGGCGATTTCCGAGCCTGCCCCGACCACGTCAGGCACCCTCTGCTCAGGCCCGACGTCGTG
GACTCGATCACCGGGAAGCGAAGGAACCAGACAATCCACATGTGCTATCTCGACACGACGTACCTGAACCCGAGA
TACTCCTTCCCGCCGCAGGACCAAGTCATCAAGGCCTGTGCGGATCTGTGCGCGTCCATGTCGCCGGATCCGCAG
TGCAAAGACGACGTGTGGGAACAGTCGGCCAAGGCCAGCGGATCGCAGGCCGTGAGCAAGTACTTCCACAGCGGC
AAATCGGAGGATGCCGGGGGCAAGTCGGGCAGCGGCCCGAAGCGCGGCCAGCGTTTGCTCGTCGTCTGCGGGACC
TACTCGATCGGCAAGGAGCGGATCTGCATCGCCATCGCCAAAGCACTCAAGACCAAGATCTTCGCGGGCCCGGCC
AAGATGCGGATCTGCAAGCAGCTGGACGACGCGGACCTCGCGTCCCTGCTCACCTCGGACCCGGTCGAGGCGCAG
GTGCACATGCAGTCGCTGATGGAGATACGGGCCGAGACGCTCAAGGACTACCTCGCCAGCTACAAGCCGCACTTC
AGCCGCGTCGTCGGCTTCCGGCCCAGCGGCTGGACCTTCCGGCCCGCCGGCGGCAAGCCGACGGCGGCGAACACG
GCCCCGAGCAGCATCCCGACGCAGCAGCTCCTGCACGGCAAGGGGTGGAGGACCCGGTTCGGCTACCGGGACTTT
GTGGCGCAGAGGGGCAGCACGAGAGAGGCCATGTGCTTCGGCGTGCCGTACTCGGAGCACAGCAGCTTCCGCGAG
CTGGCCATGTTCGTCATGGGCCTGCGGATCGACAAGGTGATCCCGACCGTCAACGTGGGGAGCGAGCAGTCGAGG
AAGAGGATGAAGGGCTGGATCGACCGGTGGGTGGCCGAGAGGAAACGAGGCGGCCTCGTCAGGCCTTTGGTCGAG
GGCGAAGACGGCGAAGGCGACGGCGACGGCGACGGCGACAGCGGGCCGGAACTGTGGGACGGGAAGACTGCCCAG
GGGGGCGGCGCCTGGTGGTAG
Transcript >Hirsu2|7846
ATGGTCACCTCGACCAAGATCAATCGGTCCAATCCGCCGAGAAAGCCGGCCAACAGCGCGCACGTCTCCAAGAAG
CCGGTCAAACCAAACGCGAGCATCCTCAGTTTCTTTCAGAAAACGCAAAAGCAGGAGGAATCTCTTTTCGTCGGG
GCCGCCCCGGCTGTGGCAACTTGCGATGACGACATCTACAGCGCCGACGAGTCCGAGTCGCCGGCCAAGAAGAGG
CGATTGTCTCGAGGGCCCCTCGATACCGTGGGGTCGGCCGATGCCCAAAAAACCGCCCATGAGAATGCTTCCCGA
GACGAAAAGTCGAGGGTCCGCACCAACCTTCCTTTCATAATCGACTCCGATAGCGAAGACGACGATGACGAGGCC
GCGCAGAGCCCGGTCGCGAAACCAGAGACCCCTGACACGCCTTCCAAGGCATCAACTGACTCGGCCCGGCACGGT
CAACCGCCACAGGAGACAACCAATGGTCGCGAGCTCGAGACGGGGGACAAGATTCCTCCGCCCCAAGTAGAGGAT
TCAACGTGTGCACGGCTCGAGGGACCCGAGGGGCTCGACGACGTCGATGGTCTGGACATGGAGGATTTCGAAGGC
GAGGAAATGCGGGAAAGGAGGTTCATGTGGGAGCAGGCCCGTCTCGAGGCCGAGGAGGAGGGATTCCAGCTCCCC
GAGGACCTGGCCGACGAGCCTCCAGACGATGGAAGCATGGCTGAGAGCTGTCCGATATGCAATGGAAGCCTGGCC
GGTGTCTCCCCCGACGAGGCGACGCGCCACGTCAACTCGTGTCTCGACGGCAACCCCATCCCGCTGCCGGCGCAA
AAGAAGGCTTCTTCGTCGGCGGCGCAGTCTGAGGTCGATTCCACCGAGATTGGCAAGCGATTTGCCCGGGCCGCC
ATCCCTCGGCCGGCGCAGGCCAGCCCATTCGAAATGGACGGCAGCGACAACAAGCGGCCGTCCAAGTCGGCCTTC
TCCAAGCTCATGTCCAACAAGGCCGAGGACTCGGCCTGGGCCACGGCGGCGGCAACGGAGCACGCCTCTCGCGGG
CGACCCGCCTACGAGCGGACCTGTCCCTTTTACAAAATCATCCCCGGCTTCAACATCTGCGTCGACGCCTTCCGG
TACGGCGCCGTCCAGGGATGCGAGGCCTACTTCCTCAGCCACTTCCACAGCGACCACTACATTGGCCTGACGGCC
AACTGGAGGCACGGCCCCATCTACTGCAGCAAAGTGACCGGGAGCCTGGTGAGGAAGCAGCTGCGGACCGCGGCC
CAATGGGTCGTCGAGCTCGAGTTCGACAGGCCCTACGACGTTCCGGGAACGGGAGCCAGCGTGACCATGATACCG
GCCAACCACTGCCCGGGGAGCTCCCTGTTCCTCTTCCAAAAGCCGTCGGGCGCAGGCCCCGACGCCGGGACGCGG
CGAATCCTGCACTGCGGCGATTTCCGAGCCTGCCCCGACCACGTCAGGCACCCTCTGCTCAGGCCCGACGTCGTG
GACTCGATCACCGGGAAGCGAAGGAACCAGACAATCCACATGTGCTATCTCGACACGACGTACCTGAACCCGAGA
TACTCCTTCCCGCCGCAGGACCAAGTCATCAAGGCCTGTGCGGATCTGTGCGCGTCCATGTCGCCGGATCCGCAG
TGCAAAGACGACGTGTGGGAACAGTCGGCCAAGGCCAGCGGATCGCAGGCCGTGAGCAAGTACTTCCACAGCGGC
AAATCGGAGGATGCCGGGGGCAAGTCGGGCAGCGGCCCGAAGCGCGGCCAGCGTTTGCTCGTCGTCTGCGGGACC
TACTCGATCGGCAAGGAGCGGATCTGCATCGCCATCGCCAAAGCACTCAAGACCAAGATCTTCGCGGGCCCGGCC
AAGATGCGGATCTGCAAGCAGCTGGACGACGCGGACCTCGCGTCCCTGCTCACCTCGGACCCGGTCGAGGCGCAG
GTGCACATGCAGTCGCTGATGGAGATACGGGCCGAGACGCTCAAGGACTACCTCGCCAGCTACAAGCCGCACTTC
AGCCGCGTCGTCGGCTTCCGGCCCAGCGGCTGGACCTTCCGGCCCGCCGGCGGCAAGCCGACGGCGGCGAACACG
GCCCCGAGCAGCATCCCGACGCAGCAGCTCCTGCACGGCAAGGGGTGGAGGACCCGGTTCGGCTACCGGGACTTT
GTGGCGCAGAGGGGCAGCACGAGAGAGGCCATGTGCTTCGGCGTGCCGTACTCGGAGCACAGCAGCTTCCGCGAG
CTGGCCATGTTCGTCATGGGCCTGCGGATCGACAAGGTGATCCCGACCGTCAACGTGGGGAGCGAGCAGTCGAGG
AAGAGGATGAAGGGCTGGATCGACCGGTGGGTGGCCGAGAGGAAACGAGGCGGCCTCGTCAGGCCTTTGGTCGAG
GGCGAAGACGGCGAAGGCGACGGCGACGGCGACGGCGACAGCGGGCCGGAACTGTGGGACGGGAAGACTGCCCAG
GGGGGCGGCGCCTGGTGGTAG
Gene >Hirsu2|7846
ATGGTCACCTCGACCAAGATCAATCGGTCCAATCCGCCGAGAAAGCCGGCCAACAGCGCGCACGTCTCCAAGAAG
CCGGTCAAACCAAACGCGAGCATCCTCAGTTTCTTTCAGAAAACGCAAAAGCAGGAGGAATCTCTTTTCGTCGGG
GCCGCCCCGGCTGTGGCAACTTGCGATGACGACATCTACAGCGCCGACGAGTCCGAGTCGCCGGCCAAGAAGAGG
CGATTGTCTCGAGGGCCCCTCGATACCGTGGGGTCGGCCGATGCCCAAAAAACCGCCCATGAGAATGCTTCCCGA
GACGAAAAGTCGAGGGTCCGCACCAACCTTCCTTTCATAATCGACTCCGATAGCGAAGACGACGATGACGAGGCC
GCGCAGAGCCCGGTCGCGAAACCAGAGACCCCTGACACGCCTTCCAAGGCATCAACTGACTCGGCCCGGCACGGT
CAACCGCCACAGGAGACAACCAATGGTCGCGAGCTCGAGACGGGGGACAAGATTCCTCCGCCCCAAGTAGAGGAT
TCAACGTGTGCACGGCTCGAGGGACCCGAGGGGCTCGACGACGTCGATGGTCTGGACATGGAGGATTTCGAAGGC
GAGGAAATGCGGGAAAGGAGGTTCATGTGGGAGCAGGCCCGTCTCGAGGCCGAGGAGGAGGGATTCCAGCTCCCC
GAGGACCTGGCCGACGAGCCTCCAGACGATGGAAGCATGGCTGAGAGCTGTCCGATATGCAATGGAAGCCTGGCC
GGTGTCTCCCCCGACGAGGCGACGCGCCACGTCAACTCGTGTCTCGACGGCAACCCCATCCCGCTGCCGGCGCAA
AAGAAGGCTTCTTCGTCGGCGGCGCAGTCTGAGGTCGATTCCACCGAGATTGGCAAGCGATTTGCCCGGGCCGCC
ATCCCTCGGCCGGCGCAGGCCAGCCCATTCGAAATGGACGGCAGCGACAACAAGCGGCCGTCCAAGTCGGCCTTC
TCCAAGCTCATGTCCAACAAGGCCGAGGACTCGGCCTGGGCCACGGCGGCGGCAACGGAGCACGCCTCTCGCGGG
CGACCCGCCTACGAGCGGACCTGTCCCTTTTACAAAATCATCCCCGGCTTCAACATCTGCGTCGACGCCTTCCGG
TACGGCGCCGTCCAGGGATGCGAGGCCTACTTCCTCAGCCACTTCCACAGCGACCACTACATTGGCCTGACGGCC
AACTGGAGGCACGGCCCCATCTACTGCAGCAAAGTGACCGGGAGCCTGGTGAGGAAGCAGCTGCGGACCGCGGCC
CAATGGGTCGTCGAGCTCGAGTTCGACAGGCCCTACGACGTTCCGGGAACGGGAGCCAGCGTGACCATGATACCG
GCCAACCACTGCCCGGGGAGCTCCCTGTTCCTCTTCCAAAAGCCGTCGGGCGCAGGCCCCGACGCCGGGACGCGG
CGAATCCTGCACTGCGGCGATTTCCGAGCCTGCCCCGACCACGTCAGGCACCCTCTGCTCAGGCCCGACGTCGTG
GACTCGATCACCGGGAAGCGAAGGAACCAGACAATCCACATGTGCTATCTCGACACGACGTACCTGAACCCGAGA
TACTCCTTCCCGCCGCAGGACCAAGTCATCAAGGCCTGTGCGGATCTGTGCGCGTCCATGTCGCCGGATCCGCAG
TGCAAAGACGACGTGTGGGAACAGTCGGCCAAGGCCAGCGGATCGCAGGCCGTGAGCAAGTACTTCCACAGCGGC
AAATCGGAGGATGCCGGGGGCAAGTCGGGCAGCGGCCCGAAGCGCGGCCAGCGTTTGCTCGTCGTCTGCGGGACC
TACTCGATCGGCAAGGAGCGGATCTGCATCGCCATCGCCAAAGCACTCAAGACCAAGATCTTCGCGGGCCCGGCC
AAGATGCGGATCTGCAAGCAGCTGGACGACGCGGACCTCGCGTCCCTGCTCACCTCGGACCCGGTCGAGGCGCAG
GTGCACATGCAGTCGCTGATGGAGATACGGGCCGAGACGCTCAAGGACTACCTCGCCAGCTACAAGCCGCACTTC
AGCCGCGTCGTCGGCTTCCGGCCCAGCGGCTGGACCTTCCGGCCCGCCGGCGGCAAGCCGACGGCGGCGAACACG
GCCCCGAGCAGCATCCCGACGCAGCAGCTCCTGCACGGCAAGGGGTGGAGGACCCGGTTCGGCTACCGGGACTTT
GTGGCGCAGAGGGGCAGCACGAGAGAGGCCATGTGCTTCGGCGTGCCGTACTCGGAGCACAGCAGCTTCCGCGAG
CTGGCCATGTTCGTCATGGGCCTGCGGATCGACAAGGTGATCCCGACCGTCAACGTGGGGAGCGAGCAGTCGAGG
AAGAGGATGAAGGGCTGGATCGACCGGTGGGTGGCCGAGAGGAAACGAGGCGGCCTCGTCAGGCCTTTGGTCGAG
GGCGAAGACGGCGAAGGCGACGGCGACGGCGACGGCGACAGCGGGCCGGAACTGTGGGACGGGAAGACTGCCCAG
GGGGGCGGCGCCTGGTGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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