Protein ID | Hirsu2|7846 |
Gene name | |
Location | Contig_48:33208..35704 |
Strand | + |
Gene length (bp) | 2496 |
Transcript length (bp) | 2496 |
Coding sequence length (bp) | 2496 |
Protein length (aa) | 832 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07522 | DRMBL | DNA repair metallo-beta-lactamase | 1.3E-36 | 638 | 770 |
PF12706 | Lactamase_B_2 | Beta-lactamase superfamily domain | 4.5E-07 | 382 | 512 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q10264|PSO2_SCHPO | DNA cross-link repair protein pso2/snm1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pso2 PE=3 SV=3 | 234 | 795 | 3.0E-122 |
sp|Q38961|SNM1_ARATH | DNA cross-link repair protein SNM1 OS=Arabidopsis thaliana GN=SNM1 PE=2 SV=1 | 308 | 786 | 6.0E-74 |
sp|Q9JIC3|DCR1A_MOUSE | DNA cross-link repair 1A protein OS=Mus musculus GN=Dclre1a PE=1 SV=2 | 348 | 788 | 3.0E-73 |
sp|Q5QJC4|DCR1A_CHICK | DNA cross-link repair 1A protein OS=Gallus gallus GN=DCLRE1A PE=1 SV=1 | 345 | 788 | 3.0E-73 |
sp|Q6PJP8|DCR1A_HUMAN | DNA cross-link repair 1A protein OS=Homo sapiens GN=DCLRE1A PE=1 SV=3 | 355 | 788 | 1.0E-71 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q10264|PSO2_SCHPO | DNA cross-link repair protein pso2/snm1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pso2 PE=3 SV=3 | 234 | 795 | 3.0E-122 |
sp|Q38961|SNM1_ARATH | DNA cross-link repair protein SNM1 OS=Arabidopsis thaliana GN=SNM1 PE=2 SV=1 | 308 | 786 | 6.0E-74 |
sp|Q9JIC3|DCR1A_MOUSE | DNA cross-link repair 1A protein OS=Mus musculus GN=Dclre1a PE=1 SV=2 | 348 | 788 | 3.0E-73 |
sp|Q5QJC4|DCR1A_CHICK | DNA cross-link repair 1A protein OS=Gallus gallus GN=DCLRE1A PE=1 SV=1 | 345 | 788 | 3.0E-73 |
sp|Q6PJP8|DCR1A_HUMAN | DNA cross-link repair 1A protein OS=Homo sapiens GN=DCLRE1A PE=1 SV=3 | 355 | 788 | 1.0E-71 |
sp|P30620|PSO2_YEAST | DNA cross-link repair protein PSO2/SNM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PSO2 PE=1 SV=1 | 242 | 790 | 2.0E-58 |
sp|Q86KS1|DCR1_DICDI | DNA cross-link repair 1 protein OS=Dictyostelium discoideum GN=dclre1 PE=3 SV=1 | 346 | 771 | 2.0E-46 |
sp|Q5QJC3|DCR1B_CHICK | 5' exonuclease Apollo OS=Gallus gallus GN=DCLRE1B PE=2 SV=1 | 363 | 768 | 1.0E-28 |
sp|D2H8V8|DCR1B_AILME | 5' exonuclease Apollo OS=Ailuropoda melanoleuca GN=DCLRE1B PE=3 SV=1 | 363 | 768 | 8.0E-27 |
sp|Q9H816|DCR1B_HUMAN | 5' exonuclease Apollo OS=Homo sapiens GN=DCLRE1B PE=1 SV=1 | 363 | 768 | 2.0E-26 |
sp|Q4KLY6|DCR1B_RAT | 5' exonuclease Apollo OS=Rattus norvegicus GN=Dclre1b PE=1 SV=2 | 363 | 767 | 1.0E-24 |
sp|Q8C7W7|DCR1B_MOUSE | 5' exonuclease Apollo OS=Mus musculus GN=Dclre1b PE=1 SV=2 | 363 | 768 | 4.0E-24 |
sp|B0V2S2|DCR1B_DANRE | 5' exonuclease Apollo OS=Danio rerio GN=dclre1b PE=2 SV=1 | 362 | 638 | 4.0E-24 |
sp|Q5QJC2|DCR1C_CHICK | Protein artemis OS=Gallus gallus GN=DCLRE1C PE=2 SV=1 | 369 | 583 | 6.0E-15 |
sp|Q5XIX3|DCR1C_RAT | Protein artemis OS=Rattus norvegicus GN=Dclre1c PE=1 SV=1 | 368 | 581 | 7.0E-14 |
sp|Q8K4J0|DCR1C_MOUSE | Protein artemis OS=Mus musculus GN=Dclre1c PE=1 SV=2 | 368 | 581 | 3.0E-13 |
sp|Q5R6Z9|DCR1C_PONAB | Protein artemis OS=Pongo abelii GN=DCLRE1C PE=2 SV=1 | 368 | 581 | 7.0E-13 |
sp|Q96SD1|DCR1C_HUMAN | Protein artemis OS=Homo sapiens GN=DCLRE1C PE=1 SV=2 | 368 | 581 | 7.0E-13 |
sp|Q5RGE5|DCR1C_DANRE | Protein artemis OS=Danio rerio GN=dclre1c PE=2 SV=1 | 384 | 568 | 1.0E-11 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 43 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|7846 MVTSTKINRSNPPRKPANSAHVSKKPVKPNASILSFFQKTQKQEESLFVGAAPAVATCDDDIYSADESESPAKKR RLSRGPLDTVGSADAQKTAHENASRDEKSRVRTNLPFIIDSDSEDDDDEAAQSPVAKPETPDTPSKASTDSARHG QPPQETTNGRELETGDKIPPPQVEDSTCARLEGPEGLDDVDGLDMEDFEGEEMRERRFMWEQARLEAEEEGFQLP EDLADEPPDDGSMAESCPICNGSLAGVSPDEATRHVNSCLDGNPIPLPAQKKASSSAAQSEVDSTEIGKRFARAA IPRPAQASPFEMDGSDNKRPSKSAFSKLMSNKAEDSAWATAAATEHASRGRPAYERTCPFYKIIPGFNICVDAFR YGAVQGCEAYFLSHFHSDHYIGLTANWRHGPIYCSKVTGSLVRKQLRTAAQWVVELEFDRPYDVPGTGASVTMIP ANHCPGSSLFLFQKPSGAGPDAGTRRILHCGDFRACPDHVRHPLLRPDVVDSITGKRRNQTIHMCYLDTTYLNPR YSFPPQDQVIKACADLCASMSPDPQCKDDVWEQSAKASGSQAVSKYFHSGKSEDAGGKSGSGPKRGQRLLVVCGT YSIGKERICIAIAKALKTKIFAGPAKMRICKQLDDADLASLLTSDPVEAQVHMQSLMEIRAETLKDYLASYKPHF SRVVGFRPSGWTFRPAGGKPTAANTAPSSIPTQQLLHGKGWRTRFGYRDFVAQRGSTREAMCFGVPYSEHSSFRE LAMFVMGLRIDKVIPTVNVGSEQSRKRMKGWIDRWVAERKRGGLVRPLVEGEDGEGDGDGDGDSGPELWDGKTAQ GGGAWW* |
Coding | >Hirsu2|7846 ATGGTCACCTCGACCAAGATCAATCGGTCCAATCCGCCGAGAAAGCCGGCCAACAGCGCGCACGTCTCCAAGAAG CCGGTCAAACCAAACGCGAGCATCCTCAGTTTCTTTCAGAAAACGCAAAAGCAGGAGGAATCTCTTTTCGTCGGG GCCGCCCCGGCTGTGGCAACTTGCGATGACGACATCTACAGCGCCGACGAGTCCGAGTCGCCGGCCAAGAAGAGG CGATTGTCTCGAGGGCCCCTCGATACCGTGGGGTCGGCCGATGCCCAAAAAACCGCCCATGAGAATGCTTCCCGA GACGAAAAGTCGAGGGTCCGCACCAACCTTCCTTTCATAATCGACTCCGATAGCGAAGACGACGATGACGAGGCC GCGCAGAGCCCGGTCGCGAAACCAGAGACCCCTGACACGCCTTCCAAGGCATCAACTGACTCGGCCCGGCACGGT CAACCGCCACAGGAGACAACCAATGGTCGCGAGCTCGAGACGGGGGACAAGATTCCTCCGCCCCAAGTAGAGGAT TCAACGTGTGCACGGCTCGAGGGACCCGAGGGGCTCGACGACGTCGATGGTCTGGACATGGAGGATTTCGAAGGC GAGGAAATGCGGGAAAGGAGGTTCATGTGGGAGCAGGCCCGTCTCGAGGCCGAGGAGGAGGGATTCCAGCTCCCC GAGGACCTGGCCGACGAGCCTCCAGACGATGGAAGCATGGCTGAGAGCTGTCCGATATGCAATGGAAGCCTGGCC GGTGTCTCCCCCGACGAGGCGACGCGCCACGTCAACTCGTGTCTCGACGGCAACCCCATCCCGCTGCCGGCGCAA AAGAAGGCTTCTTCGTCGGCGGCGCAGTCTGAGGTCGATTCCACCGAGATTGGCAAGCGATTTGCCCGGGCCGCC ATCCCTCGGCCGGCGCAGGCCAGCCCATTCGAAATGGACGGCAGCGACAACAAGCGGCCGTCCAAGTCGGCCTTC TCCAAGCTCATGTCCAACAAGGCCGAGGACTCGGCCTGGGCCACGGCGGCGGCAACGGAGCACGCCTCTCGCGGG CGACCCGCCTACGAGCGGACCTGTCCCTTTTACAAAATCATCCCCGGCTTCAACATCTGCGTCGACGCCTTCCGG TACGGCGCCGTCCAGGGATGCGAGGCCTACTTCCTCAGCCACTTCCACAGCGACCACTACATTGGCCTGACGGCC AACTGGAGGCACGGCCCCATCTACTGCAGCAAAGTGACCGGGAGCCTGGTGAGGAAGCAGCTGCGGACCGCGGCC CAATGGGTCGTCGAGCTCGAGTTCGACAGGCCCTACGACGTTCCGGGAACGGGAGCCAGCGTGACCATGATACCG GCCAACCACTGCCCGGGGAGCTCCCTGTTCCTCTTCCAAAAGCCGTCGGGCGCAGGCCCCGACGCCGGGACGCGG CGAATCCTGCACTGCGGCGATTTCCGAGCCTGCCCCGACCACGTCAGGCACCCTCTGCTCAGGCCCGACGTCGTG GACTCGATCACCGGGAAGCGAAGGAACCAGACAATCCACATGTGCTATCTCGACACGACGTACCTGAACCCGAGA TACTCCTTCCCGCCGCAGGACCAAGTCATCAAGGCCTGTGCGGATCTGTGCGCGTCCATGTCGCCGGATCCGCAG TGCAAAGACGACGTGTGGGAACAGTCGGCCAAGGCCAGCGGATCGCAGGCCGTGAGCAAGTACTTCCACAGCGGC AAATCGGAGGATGCCGGGGGCAAGTCGGGCAGCGGCCCGAAGCGCGGCCAGCGTTTGCTCGTCGTCTGCGGGACC TACTCGATCGGCAAGGAGCGGATCTGCATCGCCATCGCCAAAGCACTCAAGACCAAGATCTTCGCGGGCCCGGCC AAGATGCGGATCTGCAAGCAGCTGGACGACGCGGACCTCGCGTCCCTGCTCACCTCGGACCCGGTCGAGGCGCAG GTGCACATGCAGTCGCTGATGGAGATACGGGCCGAGACGCTCAAGGACTACCTCGCCAGCTACAAGCCGCACTTC AGCCGCGTCGTCGGCTTCCGGCCCAGCGGCTGGACCTTCCGGCCCGCCGGCGGCAAGCCGACGGCGGCGAACACG GCCCCGAGCAGCATCCCGACGCAGCAGCTCCTGCACGGCAAGGGGTGGAGGACCCGGTTCGGCTACCGGGACTTT GTGGCGCAGAGGGGCAGCACGAGAGAGGCCATGTGCTTCGGCGTGCCGTACTCGGAGCACAGCAGCTTCCGCGAG CTGGCCATGTTCGTCATGGGCCTGCGGATCGACAAGGTGATCCCGACCGTCAACGTGGGGAGCGAGCAGTCGAGG AAGAGGATGAAGGGCTGGATCGACCGGTGGGTGGCCGAGAGGAAACGAGGCGGCCTCGTCAGGCCTTTGGTCGAG GGCGAAGACGGCGAAGGCGACGGCGACGGCGACGGCGACAGCGGGCCGGAACTGTGGGACGGGAAGACTGCCCAG GGGGGCGGCGCCTGGTGGTAG |
Transcript | >Hirsu2|7846 ATGGTCACCTCGACCAAGATCAATCGGTCCAATCCGCCGAGAAAGCCGGCCAACAGCGCGCACGTCTCCAAGAAG CCGGTCAAACCAAACGCGAGCATCCTCAGTTTCTTTCAGAAAACGCAAAAGCAGGAGGAATCTCTTTTCGTCGGG GCCGCCCCGGCTGTGGCAACTTGCGATGACGACATCTACAGCGCCGACGAGTCCGAGTCGCCGGCCAAGAAGAGG CGATTGTCTCGAGGGCCCCTCGATACCGTGGGGTCGGCCGATGCCCAAAAAACCGCCCATGAGAATGCTTCCCGA GACGAAAAGTCGAGGGTCCGCACCAACCTTCCTTTCATAATCGACTCCGATAGCGAAGACGACGATGACGAGGCC GCGCAGAGCCCGGTCGCGAAACCAGAGACCCCTGACACGCCTTCCAAGGCATCAACTGACTCGGCCCGGCACGGT CAACCGCCACAGGAGACAACCAATGGTCGCGAGCTCGAGACGGGGGACAAGATTCCTCCGCCCCAAGTAGAGGAT TCAACGTGTGCACGGCTCGAGGGACCCGAGGGGCTCGACGACGTCGATGGTCTGGACATGGAGGATTTCGAAGGC GAGGAAATGCGGGAAAGGAGGTTCATGTGGGAGCAGGCCCGTCTCGAGGCCGAGGAGGAGGGATTCCAGCTCCCC GAGGACCTGGCCGACGAGCCTCCAGACGATGGAAGCATGGCTGAGAGCTGTCCGATATGCAATGGAAGCCTGGCC GGTGTCTCCCCCGACGAGGCGACGCGCCACGTCAACTCGTGTCTCGACGGCAACCCCATCCCGCTGCCGGCGCAA AAGAAGGCTTCTTCGTCGGCGGCGCAGTCTGAGGTCGATTCCACCGAGATTGGCAAGCGATTTGCCCGGGCCGCC ATCCCTCGGCCGGCGCAGGCCAGCCCATTCGAAATGGACGGCAGCGACAACAAGCGGCCGTCCAAGTCGGCCTTC TCCAAGCTCATGTCCAACAAGGCCGAGGACTCGGCCTGGGCCACGGCGGCGGCAACGGAGCACGCCTCTCGCGGG CGACCCGCCTACGAGCGGACCTGTCCCTTTTACAAAATCATCCCCGGCTTCAACATCTGCGTCGACGCCTTCCGG TACGGCGCCGTCCAGGGATGCGAGGCCTACTTCCTCAGCCACTTCCACAGCGACCACTACATTGGCCTGACGGCC AACTGGAGGCACGGCCCCATCTACTGCAGCAAAGTGACCGGGAGCCTGGTGAGGAAGCAGCTGCGGACCGCGGCC CAATGGGTCGTCGAGCTCGAGTTCGACAGGCCCTACGACGTTCCGGGAACGGGAGCCAGCGTGACCATGATACCG GCCAACCACTGCCCGGGGAGCTCCCTGTTCCTCTTCCAAAAGCCGTCGGGCGCAGGCCCCGACGCCGGGACGCGG CGAATCCTGCACTGCGGCGATTTCCGAGCCTGCCCCGACCACGTCAGGCACCCTCTGCTCAGGCCCGACGTCGTG GACTCGATCACCGGGAAGCGAAGGAACCAGACAATCCACATGTGCTATCTCGACACGACGTACCTGAACCCGAGA TACTCCTTCCCGCCGCAGGACCAAGTCATCAAGGCCTGTGCGGATCTGTGCGCGTCCATGTCGCCGGATCCGCAG TGCAAAGACGACGTGTGGGAACAGTCGGCCAAGGCCAGCGGATCGCAGGCCGTGAGCAAGTACTTCCACAGCGGC AAATCGGAGGATGCCGGGGGCAAGTCGGGCAGCGGCCCGAAGCGCGGCCAGCGTTTGCTCGTCGTCTGCGGGACC TACTCGATCGGCAAGGAGCGGATCTGCATCGCCATCGCCAAAGCACTCAAGACCAAGATCTTCGCGGGCCCGGCC AAGATGCGGATCTGCAAGCAGCTGGACGACGCGGACCTCGCGTCCCTGCTCACCTCGGACCCGGTCGAGGCGCAG GTGCACATGCAGTCGCTGATGGAGATACGGGCCGAGACGCTCAAGGACTACCTCGCCAGCTACAAGCCGCACTTC AGCCGCGTCGTCGGCTTCCGGCCCAGCGGCTGGACCTTCCGGCCCGCCGGCGGCAAGCCGACGGCGGCGAACACG GCCCCGAGCAGCATCCCGACGCAGCAGCTCCTGCACGGCAAGGGGTGGAGGACCCGGTTCGGCTACCGGGACTTT GTGGCGCAGAGGGGCAGCACGAGAGAGGCCATGTGCTTCGGCGTGCCGTACTCGGAGCACAGCAGCTTCCGCGAG CTGGCCATGTTCGTCATGGGCCTGCGGATCGACAAGGTGATCCCGACCGTCAACGTGGGGAGCGAGCAGTCGAGG AAGAGGATGAAGGGCTGGATCGACCGGTGGGTGGCCGAGAGGAAACGAGGCGGCCTCGTCAGGCCTTTGGTCGAG GGCGAAGACGGCGAAGGCGACGGCGACGGCGACGGCGACAGCGGGCCGGAACTGTGGGACGGGAAGACTGCCCAG GGGGGCGGCGCCTGGTGGTAG |
Gene | >Hirsu2|7846 ATGGTCACCTCGACCAAGATCAATCGGTCCAATCCGCCGAGAAAGCCGGCCAACAGCGCGCACGTCTCCAAGAAG CCGGTCAAACCAAACGCGAGCATCCTCAGTTTCTTTCAGAAAACGCAAAAGCAGGAGGAATCTCTTTTCGTCGGG GCCGCCCCGGCTGTGGCAACTTGCGATGACGACATCTACAGCGCCGACGAGTCCGAGTCGCCGGCCAAGAAGAGG CGATTGTCTCGAGGGCCCCTCGATACCGTGGGGTCGGCCGATGCCCAAAAAACCGCCCATGAGAATGCTTCCCGA GACGAAAAGTCGAGGGTCCGCACCAACCTTCCTTTCATAATCGACTCCGATAGCGAAGACGACGATGACGAGGCC GCGCAGAGCCCGGTCGCGAAACCAGAGACCCCTGACACGCCTTCCAAGGCATCAACTGACTCGGCCCGGCACGGT CAACCGCCACAGGAGACAACCAATGGTCGCGAGCTCGAGACGGGGGACAAGATTCCTCCGCCCCAAGTAGAGGAT TCAACGTGTGCACGGCTCGAGGGACCCGAGGGGCTCGACGACGTCGATGGTCTGGACATGGAGGATTTCGAAGGC GAGGAAATGCGGGAAAGGAGGTTCATGTGGGAGCAGGCCCGTCTCGAGGCCGAGGAGGAGGGATTCCAGCTCCCC GAGGACCTGGCCGACGAGCCTCCAGACGATGGAAGCATGGCTGAGAGCTGTCCGATATGCAATGGAAGCCTGGCC GGTGTCTCCCCCGACGAGGCGACGCGCCACGTCAACTCGTGTCTCGACGGCAACCCCATCCCGCTGCCGGCGCAA AAGAAGGCTTCTTCGTCGGCGGCGCAGTCTGAGGTCGATTCCACCGAGATTGGCAAGCGATTTGCCCGGGCCGCC ATCCCTCGGCCGGCGCAGGCCAGCCCATTCGAAATGGACGGCAGCGACAACAAGCGGCCGTCCAAGTCGGCCTTC TCCAAGCTCATGTCCAACAAGGCCGAGGACTCGGCCTGGGCCACGGCGGCGGCAACGGAGCACGCCTCTCGCGGG CGACCCGCCTACGAGCGGACCTGTCCCTTTTACAAAATCATCCCCGGCTTCAACATCTGCGTCGACGCCTTCCGG TACGGCGCCGTCCAGGGATGCGAGGCCTACTTCCTCAGCCACTTCCACAGCGACCACTACATTGGCCTGACGGCC AACTGGAGGCACGGCCCCATCTACTGCAGCAAAGTGACCGGGAGCCTGGTGAGGAAGCAGCTGCGGACCGCGGCC CAATGGGTCGTCGAGCTCGAGTTCGACAGGCCCTACGACGTTCCGGGAACGGGAGCCAGCGTGACCATGATACCG GCCAACCACTGCCCGGGGAGCTCCCTGTTCCTCTTCCAAAAGCCGTCGGGCGCAGGCCCCGACGCCGGGACGCGG CGAATCCTGCACTGCGGCGATTTCCGAGCCTGCCCCGACCACGTCAGGCACCCTCTGCTCAGGCCCGACGTCGTG GACTCGATCACCGGGAAGCGAAGGAACCAGACAATCCACATGTGCTATCTCGACACGACGTACCTGAACCCGAGA TACTCCTTCCCGCCGCAGGACCAAGTCATCAAGGCCTGTGCGGATCTGTGCGCGTCCATGTCGCCGGATCCGCAG TGCAAAGACGACGTGTGGGAACAGTCGGCCAAGGCCAGCGGATCGCAGGCCGTGAGCAAGTACTTCCACAGCGGC AAATCGGAGGATGCCGGGGGCAAGTCGGGCAGCGGCCCGAAGCGCGGCCAGCGTTTGCTCGTCGTCTGCGGGACC TACTCGATCGGCAAGGAGCGGATCTGCATCGCCATCGCCAAAGCACTCAAGACCAAGATCTTCGCGGGCCCGGCC AAGATGCGGATCTGCAAGCAGCTGGACGACGCGGACCTCGCGTCCCTGCTCACCTCGGACCCGGTCGAGGCGCAG GTGCACATGCAGTCGCTGATGGAGATACGGGCCGAGACGCTCAAGGACTACCTCGCCAGCTACAAGCCGCACTTC AGCCGCGTCGTCGGCTTCCGGCCCAGCGGCTGGACCTTCCGGCCCGCCGGCGGCAAGCCGACGGCGGCGAACACG GCCCCGAGCAGCATCCCGACGCAGCAGCTCCTGCACGGCAAGGGGTGGAGGACCCGGTTCGGCTACCGGGACTTT GTGGCGCAGAGGGGCAGCACGAGAGAGGCCATGTGCTTCGGCGTGCCGTACTCGGAGCACAGCAGCTTCCGCGAG CTGGCCATGTTCGTCATGGGCCTGCGGATCGACAAGGTGATCCCGACCGTCAACGTGGGGAGCGAGCAGTCGAGG AAGAGGATGAAGGGCTGGATCGACCGGTGGGTGGCCGAGAGGAAACGAGGCGGCCTCGTCAGGCCTTTGGTCGAG GGCGAAGACGGCGAAGGCGACGGCGACGGCGACGGCGACAGCGGGCCGGAACTGTGGGACGGGAAGACTGCCCAG GGGGGCGGCGCCTGGTGGTAG |