© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|7834 |
| Gene name | |
| Location | Contig_48:2148..3300 |
| Strand | - |
| Gene length (bp) | 1152 |
| Transcript length (bp) | 903 |
| Coding sequence length (bp) | 903 |
| Protein length (aa) | 301 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF14327 | CSTF2_hinge | Hinge domain of cleavage stimulation factor subunit 2 | 1.2E-32 | 122 | 201 |
| PF00076 | RRM_1 | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 4.7E-21 | 10 | 80 |
| PF14304 | CSTF_C | Transcription termination and cleavage factor C-terminal | 2.5E-10 | 261 | 291 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q8BIQ5|CSTF2_MOUSE | Cleavage stimulation factor subunit 2 OS=Mus musculus GN=Cstf2 PE=1 SV=2 | 8 | 196 | 2.0E-39 |
| sp|Q8HXM1|CSTF2_BOVIN | Cleavage stimulation factor subunit 2 OS=Bos taurus GN=CSTF2 PE=2 SV=1 | 8 | 196 | 3.0E-39 |
| sp|Q5RDA3|CSTF2_PONAB | Cleavage stimulation factor subunit 2 OS=Pongo abelii GN=CSTF2 PE=2 SV=1 | 8 | 196 | 3.0E-39 |
| sp|P33240|CSTF2_HUMAN | Cleavage stimulation factor subunit 2 OS=Homo sapiens GN=CSTF2 PE=1 SV=1 | 8 | 196 | 3.0E-39 |
| sp|Q9H0L4|CSTFT_HUMAN | Cleavage stimulation factor subunit 2 tau variant OS=Homo sapiens GN=CSTF2T PE=1 SV=1 | 8 | 196 | 4.0E-36 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q8BIQ5|CSTF2_MOUSE | Cleavage stimulation factor subunit 2 OS=Mus musculus GN=Cstf2 PE=1 SV=2 | 8 | 196 | 2.0E-39 |
| sp|Q8HXM1|CSTF2_BOVIN | Cleavage stimulation factor subunit 2 OS=Bos taurus GN=CSTF2 PE=2 SV=1 | 8 | 196 | 3.0E-39 |
| sp|Q5RDA3|CSTF2_PONAB | Cleavage stimulation factor subunit 2 OS=Pongo abelii GN=CSTF2 PE=2 SV=1 | 8 | 196 | 3.0E-39 |
| sp|P33240|CSTF2_HUMAN | Cleavage stimulation factor subunit 2 OS=Homo sapiens GN=CSTF2 PE=1 SV=1 | 8 | 196 | 3.0E-39 |
| sp|Q9H0L4|CSTFT_HUMAN | Cleavage stimulation factor subunit 2 tau variant OS=Homo sapiens GN=CSTF2T PE=1 SV=1 | 8 | 196 | 4.0E-36 |
| sp|Q8C7E9|CSTFT_MOUSE | Cleavage stimulation factor subunit 2 tau variant OS=Mus musculus GN=Cstf2t PE=1 SV=2 | 8 | 196 | 6.0E-36 |
| sp|Q9M9G6|CTF64_ARATH | Cleavage stimulating factor 64 OS=Arabidopsis thaliana GN=CSTF64 PE=1 SV=1 | 8 | 207 | 3.0E-35 |
| sp|Q9P6P7|YKCG_SCHPO | Uncharacterized RNA-binding protein C644.16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC644.16 PE=3 SV=1 | 6 | 198 | 8.0E-35 |
| sp|P25299|RNA15_YEAST | mRNA 3'-end-processing protein RNA15 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RNA15 PE=1 SV=1 | 1 | 291 | 3.0E-25 |
| sp|O43040|CTF1_SCHPO | Cleavage and termination factor 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ctf1 PE=1 SV=1 | 9 | 83 | 3.0E-20 |
| sp|P19683|ROC4_NICSY | 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1 | 4 | 87 | 5.0E-13 |
| sp|Q9LIS2|RBG4_ARATH | Glycine-rich RNA-binding protein 4, mitochondrial OS=Arabidopsis thaliana GN=RBG4 PE=2 SV=1 | 2 | 87 | 9.0E-13 |
| sp|Q04836|CP31A_ARATH | 31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana GN=CP31A PE=1 SV=1 | 6 | 87 | 1.0E-12 |
| sp|Q86U06|RBM23_HUMAN | Probable RNA-binding protein 23 OS=Homo sapiens GN=RBM23 PE=1 SV=1 | 10 | 110 | 2.0E-12 |
| sp|P42696|RBM34_HUMAN | RNA-binding protein 34 OS=Homo sapiens GN=RBM34 PE=1 SV=2 | 7 | 96 | 3.0E-12 |
| sp|Q5RC80|RBM39_PONAB | RNA-binding protein 39 OS=Pongo abelii GN=RBM39 PE=2 SV=1 | 10 | 87 | 3.0E-12 |
| sp|Q14498|RBM39_HUMAN | RNA-binding protein 39 OS=Homo sapiens GN=RBM39 PE=1 SV=2 | 10 | 87 | 4.0E-12 |
| sp|Q8VH51|RBM39_MOUSE | RNA-binding protein 39 OS=Mus musculus GN=Rbm39 PE=1 SV=2 | 10 | 87 | 4.0E-12 |
| sp|Q39061|CP33_ARATH | RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana GN=CP33 PE=2 SV=1 | 10 | 116 | 6.0E-12 |
| sp|P28644|ROC1_SPIOL | 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea PE=1 SV=1 | 5 | 82 | 7.0E-12 |
| sp|Q9ZUU4|CP29B_ARATH | RNA-binding protein CP29B, chloroplastic OS=Arabidopsis thaliana GN=CP29B PE=1 SV=1 | 10 | 82 | 9.0E-12 |
| sp|Q9WX37|RBPE_NOSS1 | Putative RNA-binding protein RbpE OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=rbpE PE=3 SV=3 | 10 | 90 | 1.0E-11 |
| sp|P19682|ROC3_NICSY | 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1 | 3 | 87 | 2.0E-11 |
| sp|Q8R0F5|RBMX2_MOUSE | RNA-binding motif protein, X-linked 2 OS=Mus musculus GN=Rbmx2 PE=1 SV=1 | 10 | 83 | 2.0E-11 |
| sp|P41891|GAR2_SCHPO | Protein gar2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gar2 PE=1 SV=2 | 6 | 84 | 2.0E-11 |
| sp|Q9ZUU4|CP29B_ARATH | RNA-binding protein CP29B, chloroplastic OS=Arabidopsis thaliana GN=CP29B PE=1 SV=1 | 10 | 81 | 3.0E-11 |
| sp|Q08935|ROC1_NICSY | 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1 | 6 | 82 | 3.0E-11 |
| sp|Q9SVM8|RBG2_ARATH | Glycine-rich RNA-binding protein 2, mitochondrial OS=Arabidopsis thaliana GN=RBG2 PE=1 SV=1 | 2 | 87 | 3.0E-11 |
| sp|Q9FNR1|RBG3_ARATH | Glycine-rich RNA-binding protein 3, mitochondrial OS=Arabidopsis thaliana GN=RBG3 PE=2 SV=1 | 6 | 87 | 3.0E-11 |
| sp|B0BN49|RBMX2_RAT | RNA-binding motif protein, X-linked 2 OS=Rattus norvegicus GN=Rbmx2 PE=2 SV=1 | 10 | 83 | 5.0E-11 |
| sp|Q44554|RBPB_NOSS1 | Putative RNA-binding protein RbpB OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=rbpB PE=3 SV=3 | 10 | 82 | 6.0E-11 |
| sp|Q9Y388|RBMX2_HUMAN | RNA-binding motif protein, X-linked 2 OS=Homo sapiens GN=RBMX2 PE=1 SV=2 | 10 | 83 | 7.0E-11 |
| sp|P49313|ROC1_NICPL | 30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1 | 10 | 81 | 7.0E-11 |
| sp|Q9P3U1|YKX5_SCHPO | Uncharacterized RNA-binding protein C328.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC328.05 PE=3 SV=3 | 5 | 85 | 7.0E-11 |
| sp|Q08935|ROC1_NICSY | 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1 | 10 | 81 | 8.0E-11 |
| sp|Q57014|RBPA_SYNY3 | Putative RNA-binding protein RbpA OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=rbpA PE=3 SV=3 | 10 | 82 | 9.0E-11 |
| sp|Q98SJ2|DAZP1_XENLA | DAZ-associated protein 1 OS=Xenopus laevis GN=dazap1 PE=1 SV=1 | 7 | 81 | 1.0E-10 |
| sp|P82277|RRP2_SPIOL | 30S ribosomal protein 2, chloroplastic OS=Spinacia oleracea GN=PSRP2 PE=1 SV=1 | 7 | 84 | 2.0E-10 |
| sp|P19684|ROC5_NICSY | 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1 | 10 | 93 | 2.0E-10 |
| sp|Q9JII5|DAZP1_MOUSE | DAZ-associated protein 1 OS=Mus musculus GN=Dazap1 PE=1 SV=2 | 7 | 81 | 2.0E-10 |
| sp|Q96EP5|DAZP1_HUMAN | DAZ-associated protein 1 OS=Homo sapiens GN=DAZAP1 PE=1 SV=1 | 7 | 81 | 2.0E-10 |
| sp|P49313|ROC1_NICPL | 30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1 | 6 | 82 | 3.0E-10 |
| sp|P53883|NOP13_YEAST | Nucleolar protein 13 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NOP13 PE=1 SV=2 | 1 | 121 | 3.0E-10 |
| sp|Q44556|RBPD_NOSS1 | Putative RNA-binding protein RbpD OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=rbpD PE=3 SV=3 | 10 | 93 | 3.0E-10 |
| sp|Q08937|ROC2_NICSY | 29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1 | 7 | 87 | 4.0E-10 |
| sp|Q08937|ROC2_NICSY | 29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1 | 10 | 82 | 4.0E-10 |
| sp|Q5M9F1|RBM34_RAT | RNA-binding protein 34 OS=Rattus norvegicus GN=Rbm34 PE=1 SV=1 | 7 | 110 | 4.0E-10 |
| sp|Q1DXH0|PABP_COCIM | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Coccidioides immitis (strain RS) GN=PAB1 PE=3 SV=1 | 10 | 81 | 5.0E-10 |
| sp|O94290|IST3_SCHPO | U2 snRNP component ist3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cwf29 PE=1 SV=1 | 7 | 82 | 6.0E-10 |
| sp|Q9WX39|RBPF_NOSS1 | Putative RNA-binding protein RbpF OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=rbpF PE=3 SV=3 | 10 | 82 | 6.0E-10 |
| sp|Q8C5L7|RBM34_MOUSE | RNA-binding protein 34 OS=Mus musculus GN=Rbm34 PE=1 SV=1 | 8 | 81 | 7.0E-10 |
| sp|Q3SZM1|MK67I_BOVIN | MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Bos taurus GN=NIFK PE=2 SV=1 | 9 | 83 | 8.0E-10 |
| sp|P49314|ROC2_NICPL | 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1 | 10 | 87 | 8.0E-10 |
| sp|O43040|CTF1_SCHPO | Cleavage and termination factor 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ctf1 PE=1 SV=1 | 130 | 297 | 1.0E-09 |
| sp|P28644|ROC1_SPIOL | 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea PE=1 SV=1 | 6 | 87 | 1.0E-09 |
| sp|Q10B98|C3H25_ORYSJ | Zinc finger CCCH domain-containing protein 25 OS=Oryza sativa subsp. japonica GN=Os03g0826400 PE=2 SV=1 | 10 | 83 | 1.0E-09 |
| sp|Q9FGS0|CP31B_ARATH | RNA-binding protein CP31B, chloroplastic OS=Arabidopsis thaliana GN=CP31B PE=1 SV=1 | 5 | 82 | 1.0E-09 |
| sp|Q43349|CP29A_ARATH | 29 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana GN=CP29A PE=2 SV=2 | 10 | 81 | 2.0E-09 |
| sp|Q43349|CP29A_ARATH | 29 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana GN=CP29A PE=2 SV=2 | 6 | 82 | 2.0E-09 |
| sp|Q09100|RNP24_SCHPO | RNA-binding protein rnp24 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rnp24 PE=3 SV=2 | 2 | 66 | 2.0E-09 |
| sp|P40561|SGN1_YEAST | RNA-binding protein SGN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SGN1 PE=1 SV=1 | 7 | 81 | 2.0E-09 |
| sp|P49314|ROC2_NICPL | 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1 | 10 | 82 | 3.0E-09 |
| sp|Q04836|CP31A_ARATH | 31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana GN=CP31A PE=1 SV=1 | 10 | 82 | 5.0E-09 |
| sp|P10979|GRPA_MAIZE | Glycine-rich RNA-binding, abscisic acid-inducible protein OS=Zea mays GN=RAB15 PE=1 SV=1 | 10 | 82 | 5.0E-09 |
| sp|Q56JZ7|ZCRB1_BOVIN | Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Bos taurus GN=ZCRB1 PE=2 SV=1 | 5 | 80 | 5.0E-09 |
| sp|Q5AI15|PABP_CANAL | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=PAB1 PE=3 SV=1 | 10 | 81 | 5.0E-09 |
| sp|Q44560|RBPA_NOSS1 | Putative RNA-binding protein RbpA OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=rbpA PE=3 SV=3 | 10 | 82 | 5.0E-09 |
| sp|Q9C909|RBG5_ARATH | Glycine-rich RNA-binding protein 5, mitochondrial OS=Arabidopsis thaliana GN=RBG5 PE=2 SV=1 | 6 | 86 | 6.0E-09 |
| sp|P19682|ROC3_NICSY | 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1 | 10 | 82 | 7.0E-09 |
| sp|P19683|ROC4_NICSY | 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1 | 10 | 82 | 9.0E-09 |
| sp|Q6BI95|PABP_DEBHA | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=PAB1 PE=3 SV=2 | 10 | 81 | 1.0E-08 |
| sp|Q6DJI9|ZCRB1_XENLA | Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Xenopus laevis GN=zcrb1 PE=2 SV=1 | 5 | 80 | 1.0E-08 |
| sp|P31209|PABP_SCHPO | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pab1 PE=1 SV=2 | 10 | 81 | 1.0E-08 |
| sp|Q9FGS0|CP31B_ARATH | RNA-binding protein CP31B, chloroplastic OS=Arabidopsis thaliana GN=CP31B PE=1 SV=1 | 10 | 87 | 2.0E-08 |
| sp|Q8TBF4|ZCRB1_HUMAN | Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Homo sapiens GN=ZCRB1 PE=1 SV=2 | 5 | 80 | 2.0E-08 |
| sp|A5DW14|PABP_LODEL | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=PAB1 PE=3 SV=1 | 10 | 81 | 2.0E-08 |
| sp|P15771|NUCL_CHICK | Nucleolin OS=Gallus gallus GN=NCL PE=1 SV=1 | 7 | 103 | 2.0E-08 |
| sp|Q0CR95|PABP_ASPTN | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=pab1 PE=3 SV=1 | 10 | 81 | 3.0E-08 |
| sp|Q8IY67|RAVR1_HUMAN | Ribonucleoprotein PTB-binding 1 OS=Homo sapiens GN=RAVER1 PE=1 SV=1 | 4 | 180 | 3.0E-08 |
| sp|Q9CZ96|ZCRB1_MOUSE | Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Mus musculus GN=Zcrb1 PE=1 SV=1 | 5 | 80 | 3.0E-08 |
| sp|Q7XTT4|NUCL2_ORYSJ | Nucleolin 2 OS=Oryza sativa subsp. japonica GN=Os04g0620700 PE=2 SV=2 | 7 | 87 | 3.0E-08 |
| sp|Q499V6|ZCRB1_RAT | Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Rattus norvegicus GN=Zcrb1 PE=2 SV=1 | 5 | 80 | 3.0E-08 |
| sp|Q9FJN9|PABN2_ARATH | Polyadenylate-binding protein 2 OS=Arabidopsis thaliana GN=PABN2 PE=1 SV=1 | 7 | 81 | 3.0E-08 |
| sp|Q80YT9|RBM11_MOUSE | Splicing regulator RBM11 OS=Mus musculus GN=Rbm11 PE=1 SV=1 | 8 | 116 | 3.0E-08 |
| sp|Q03878|GRP1_DAUCA | Glycine-rich RNA-binding protein OS=Daucus carota PE=2 SV=1 | 10 | 82 | 4.0E-08 |
| sp|Q9NEW6|RSP3_CAEEL | Probable splicing factor, arginine/serine-rich 3 OS=Caenorhabditis elegans GN=rsp-3 PE=1 SV=2 | 10 | 84 | 4.0E-08 |
| sp|Q9SIX3|RBG1_ARATH | Probable glycine-rich RNA-binding protein 1 OS=Arabidopsis thaliana GN=RBG1 PE=2 SV=2 | 10 | 79 | 5.0E-08 |
| sp|Q91WT8|RBM47_MOUSE | RNA-binding protein 47 OS=Mus musculus GN=Rbm47 PE=1 SV=1 | 10 | 84 | 5.0E-08 |
| sp|Q19706|EIF3G_CAEEL | Eukaryotic translation initiation factor 3 subunit G OS=Caenorhabditis elegans GN=eif-3.G PE=3 SV=2 | 4 | 84 | 5.0E-08 |
| sp|Q66H68|RBM47_RAT | RNA-binding protein 47 OS=Rattus norvegicus GN=Rbm47 PE=2 SV=1 | 10 | 84 | 5.0E-08 |
| sp|Q5R469|PUF60_PONAB | Poly(U)-binding-splicing factor PUF60 OS=Pongo abelii GN=PUF60 PE=2 SV=1 | 10 | 81 | 5.0E-08 |
| sp|A8WLV5|EIF3G_CAEBR | Eukaryotic translation initiation factor 3 subunit G OS=Caenorhabditis briggsae GN=eif-3.G.1 PE=3 SV=2 | 4 | 84 | 5.0E-08 |
| sp|Q9WV25|PUF60_RAT | Poly(U)-binding-splicing factor PUF60 OS=Rattus norvegicus GN=Puf60 PE=2 SV=2 | 10 | 81 | 6.0E-08 |
| sp|Q3UEB3|PUF60_MOUSE | Poly(U)-binding-splicing factor PUF60 OS=Mus musculus GN=Puf60 PE=1 SV=2 | 10 | 81 | 6.0E-08 |
| sp|Q9UHX1|PUF60_HUMAN | Poly(U)-binding-splicing factor PUF60 OS=Homo sapiens GN=PUF60 PE=1 SV=1 | 10 | 81 | 6.0E-08 |
| sp|Q2HJG2|PUF60_BOVIN | Poly(U)-binding-splicing factor PUF60 OS=Bos taurus GN=PUF60 PE=2 SV=1 | 10 | 81 | 6.0E-08 |
| sp|Q177H0|NCBP2_AEDAE | Nuclear cap-binding protein subunit 2 OS=Aedes aegypti GN=Cbp20 PE=3 SV=1 | 9 | 83 | 6.0E-08 |
| sp|O89086|RBM3_MOUSE | RNA-binding protein 3 OS=Mus musculus GN=Rbm3 PE=1 SV=1 | 10 | 82 | 6.0E-08 |
| sp|Q0P4R6|RBM46_XENTR | Probable RNA-binding protein 46 OS=Xenopus tropicalis GN=rbm46 PE=2 SV=1 | 10 | 79 | 6.0E-08 |
| sp|Q39061|CP33_ARATH | RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana GN=CP33 PE=2 SV=1 | 10 | 88 | 7.0E-08 |
| sp|P08199|NUCL_MESAU | Nucleolin OS=Mesocricetus auratus GN=NCL PE=1 SV=2 | 6 | 85 | 7.0E-08 |
| sp|Q5R5P4|RBM47_PONAB | RNA-binding protein 47 OS=Pongo abelii GN=RBM47 PE=2 SV=2 | 10 | 84 | 7.0E-08 |
| sp|A0AV96|RBM47_HUMAN | RNA-binding protein 47 OS=Homo sapiens GN=RBM47 PE=1 SV=2 | 10 | 84 | 7.0E-08 |
| sp|Q9ZR39|U2A2A_NICPL | Splicing factor U2af large subunit A OS=Nicotiana plumbaginifolia GN=U2AF65A PE=2 SV=1 | 10 | 86 | 7.0E-08 |
| sp|P09405|NUCL_MOUSE | Nucleolin OS=Mus musculus GN=Ncl PE=1 SV=2 | 6 | 85 | 8.0E-08 |
| sp|Q4R2Z0|RBM46_MACFA | Probable RNA-binding protein 46 OS=Macaca fascicularis GN=RBM46 PE=2 SV=2 | 10 | 74 | 8.0E-08 |
| sp|P78795|EIF3G_SCHPO | Eukaryotic translation initiation factor 3 subunit G OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tif35 PE=1 SV=2 | 4 | 85 | 9.0E-08 |
| sp|Q8TBY0|RBM46_HUMAN | Probable RNA-binding protein 46 OS=Homo sapiens GN=RBM46 PE=2 SV=1 | 10 | 74 | 9.0E-08 |
| sp|P26369|U2AF2_MOUSE | Splicing factor U2AF 65 kDa subunit OS=Mus musculus GN=U2af2 PE=1 SV=3 | 10 | 81 | 9.0E-08 |
| sp|P13383|NUCL_RAT | Nucleolin OS=Rattus norvegicus GN=Ncl PE=1 SV=3 | 6 | 85 | 9.0E-08 |
| sp|P86049|RBM46_MOUSE | Probable RNA-binding protein 46 OS=Mus musculus GN=Rbm46 PE=1 SV=1 | 10 | 74 | 9.0E-08 |
| sp|P26368|U2AF2_HUMAN | Splicing factor U2AF 65 kDa subunit OS=Homo sapiens GN=U2AF2 PE=1 SV=4 | 10 | 81 | 9.0E-08 |
| sp|P57052|RBM11_HUMAN | Splicing regulator RBM11 OS=Homo sapiens GN=RBM11 PE=1 SV=1 | 8 | 121 | 1.0E-07 |
| sp|Q5RF83|CIRBP_PONAB | Cold-inducible RNA-binding protein OS=Pongo abelii GN=CIRBP PE=2 SV=1 | 10 | 82 | 1.0E-07 |
| sp|Q14011|CIRBP_HUMAN | Cold-inducible RNA-binding protein OS=Homo sapiens GN=CIRBP PE=1 SV=1 | 10 | 82 | 1.0E-07 |
| sp|Q6NVP7|PABP2_XENTR | Polyadenylate-binding protein 2 OS=Xenopus tropicalis GN=pabpn1 PE=2 SV=1 | 7 | 81 | 1.0E-07 |
| sp|Q6GL69|MK67I_XENTR | MKI67 FHA domain-interacting nucleolar phosphoprotein-like OS=Xenopus tropicalis GN=nifk PE=2 SV=1 | 9 | 83 | 1.0E-07 |
| sp|W8E7I1|RBM3_CAPHI | RNA-binding protein 3 OS=Capra hircus GN=RBM3 PE=2 SV=2 | 10 | 82 | 1.0E-07 |
| sp|Q4R4J7|NUCL_MACFA | Nucleolin OS=Macaca fascicularis GN=NCL PE=2 SV=3 | 6 | 85 | 1.0E-07 |
| sp|P19338|NUCL_HUMAN | Nucleolin OS=Homo sapiens GN=NCL PE=1 SV=3 | 6 | 85 | 1.0E-07 |
| sp|Q5RF26|NUCL_PONAB | Nucleolin OS=Pongo abelii GN=NCL PE=2 SV=3 | 6 | 85 | 1.0E-07 |
| sp|Q99070|GRP2_SORBI | Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor GN=GRP2 PE=2 SV=1 | 10 | 82 | 1.0E-07 |
| sp|Q9DED4|CIRBB_XENLA | Cold-inducible RNA-binding protein B OS=Xenopus laevis GN=cirbp-b PE=1 SV=1 | 10 | 82 | 1.0E-07 |
| sp|P98179|RBM3_HUMAN | RNA-binding protein 3 OS=Homo sapiens GN=RBM3 PE=1 SV=1 | 10 | 82 | 1.0E-07 |
| sp|Q5RJM0|MK67I_RAT | MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Rattus norvegicus GN=Nifk PE=2 SV=1 | 7 | 92 | 1.0E-07 |
| sp|A3LXL0|PABP_PICST | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=PAB1 PE=3 SV=1 | 10 | 81 | 1.0E-07 |
| sp|A1D4K4|PABP_NEOFI | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pab1 PE=3 SV=1 | 10 | 81 | 1.0E-07 |
| sp|Q4WK03|PABP_ASPFU | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pab1 PE=3 SV=1 | 10 | 81 | 1.0E-07 |
| sp|P60825|CIRBP_RAT | Cold-inducible RNA-binding protein OS=Rattus norvegicus GN=Cirbp PE=2 SV=1 | 10 | 82 | 2.0E-07 |
| sp|P60824|CIRBP_MOUSE | Cold-inducible RNA-binding protein OS=Mus musculus GN=Cirbp PE=1 SV=1 | 10 | 82 | 2.0E-07 |
| sp|P60826|CIRBP_CRIGR | Cold-inducible RNA-binding protein OS=Cricetulus griseus GN=CIRBP PE=2 SV=1 | 10 | 82 | 2.0E-07 |
| sp|Q9SD61|C3H42_ARATH | Zinc finger CCCH domain-containing protein 42 OS=Arabidopsis thaliana GN=At3g47120 PE=2 SV=1 | 10 | 83 | 2.0E-07 |
| sp|Q7SYS2|MK67I_XENLA | MKI67 FHA domain-interacting nucleolar phosphoprotein-like OS=Xenopus laevis GN=nifk PE=2 SV=2 | 9 | 83 | 2.0E-07 |
| sp|Q9DDY9|PAB2A_XENLA | Polyadenylate-binding protein 2-A OS=Xenopus laevis GN=pabpn1-a PE=2 SV=1 | 7 | 81 | 2.0E-07 |
| sp|Q9PTX2|CIRBP_LITCT | Cold-inducible RNA-binding protein OS=Lithobates catesbeiana GN=cirbp PE=2 SV=1 | 10 | 82 | 2.0E-07 |
| sp|Q7ZXB8|PAB2B_XENLA | Polyadenylate-binding protein 2-B OS=Xenopus laevis GN=pabpn1-b PE=2 SV=1 | 7 | 81 | 2.0E-07 |
| sp|Q74ZS6|PABP_ASHGO | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=PAB1 PE=3 SV=1 | 10 | 81 | 2.0E-07 |
| sp|Q7QCB6|NCBP2_ANOGA | Nuclear cap-binding protein subunit 2 OS=Anopheles gambiae GN=Cbp20 PE=3 SV=3 | 7 | 83 | 2.0E-07 |
| sp|B0BNE4|EPAB2_RAT | Embryonic polyadenylate-binding protein 2 OS=Rattus norvegicus GN=Pabpn1l PE=2 SV=1 | 8 | 81 | 2.0E-07 |
| sp|P53927|NOP15_YEAST | Ribosome biogenesis protein 15 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NOP15 PE=1 SV=1 | 9 | 81 | 2.0E-07 |
| sp|Q2R0Q1|U2A2A_ORYSJ | Splicing factor U2af large subunit A OS=Oryza sativa subsp. japonica GN=U2AF65A PE=2 SV=2 | 10 | 86 | 2.0E-07 |
| sp|Q8JIY8|MK67I_DANRE | MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Danio rerio GN=nifk PE=2 SV=2 | 9 | 79 | 2.0E-07 |
| sp|Q5SP50|ZCRB1_DANRE | Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Danio rerio GN=zcrb1 PE=2 SV=1 | 5 | 80 | 2.0E-07 |
| sp|Q2QZL4|U2A2B_ORYSJ | Splicing factor U2af large subunit B OS=Oryza sativa subsp. japonica GN=U2AF65B PE=3 SV=2 | 10 | 86 | 3.0E-07 |
| sp|Q7T1H5|DND1_DANRE | Dead end protein 1 OS=Danio rerio GN=dnd PE=1 SV=1 | 10 | 129 | 3.0E-07 |
| sp|Q5XI28|RAVR1_RAT | Ribonucleoprotein PTB-binding 1 OS=Rattus norvegicus GN=Raver1 PE=1 SV=1 | 4 | 85 | 3.0E-07 |
| sp|Q9CW46|RAVR1_MOUSE | Ribonucleoprotein PTB-binding 1 OS=Mus musculus GN=Raver1 PE=1 SV=2 | 4 | 162 | 3.0E-07 |
| sp|Q9ZR40|U2A2B_NICPL | Splicing factor U2af large subunit B OS=Nicotiana plumbaginifolia GN=U2AF65B PE=2 SV=1 | 10 | 86 | 3.0E-07 |
| sp|Q4G338|PPIE_HAECO | Peptidyl-prolyl cis-trans isomerase E OS=Haemonchus contortus PE=1 SV=1 | 7 | 84 | 3.0E-07 |
| sp|O74400|YOCE_SCHPO | Uncharacterized RNA-binding protein C4F6.14 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC4F6.14 PE=1 SV=1 | 9 | 99 | 3.0E-07 |
| sp|Q9XSR3|RBM47_CANLF | RNA-binding protein 47 OS=Canis lupus familiaris GN=RBM47 PE=2 SV=1 | 10 | 84 | 3.0E-07 |
| sp|A4QUF0|PABP_MAGO7 | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=PAB1 PE=3 SV=1 | 10 | 81 | 3.0E-07 |
| sp|Q9BYG3|MK67I_HUMAN | MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Homo sapiens GN=NIFK PE=1 SV=1 | 9 | 83 | 3.0E-07 |
| sp|Q925G0|RBM3_RAT | RNA-binding protein 3 OS=Rattus norvegicus GN=Rbm3 PE=1 SV=2 | 10 | 82 | 3.0E-07 |
| sp|Q75BJ7|NOP12_ASHGO | Nucleolar protein 12 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=NOP12 PE=3 SV=1 | 7 | 81 | 3.0E-07 |
| sp|A6NDY0|EPAB2_HUMAN | Embryonic polyadenylate-binding protein 2 OS=Homo sapiens GN=PABPN1L PE=2 SV=1 | 8 | 81 | 3.0E-07 |
| sp|Q91584|ELAV3_XENLA | ELAV-like protein 3 OS=Xenopus laevis GN=elavl3 PE=2 SV=1 | 10 | 84 | 4.0E-07 |
| sp|Q24562|U2AF2_DROME | Splicing factor U2AF 50 kDa subunit OS=Drosophila melanogaster GN=U2af50 PE=1 SV=1 | 10 | 81 | 4.0E-07 |
| sp|Q05966|GRP10_BRANA | Glycine-rich RNA-binding protein 10 OS=Brassica napus GN=GRP10 PE=2 SV=1 | 10 | 82 | 4.0E-07 |
| sp|Q0U6E7|EIF3G_PHANO | Eukaryotic translation initiation factor 3 subunit G OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) GN=TIF35 PE=3 SV=2 | 4 | 86 | 4.0E-07 |
| sp|Q28GD4|ELAV2_XENTR | ELAV-like protein 2 OS=Xenopus tropicalis GN=elavl2 PE=2 SV=2 | 10 | 84 | 4.0E-07 |
| sp|Q9SYG4|UBP1A_ARATH | Oligouridylate-binding protein 1A OS=Arabidopsis thaliana GN=UBP1A PE=1 SV=1 | 10 | 105 | 4.0E-07 |
| sp|Q28FX0|ELAV3_XENTR | ELAV-like protein 3 OS=Xenopus tropicalis GN=elavl3 PE=2 SV=1 | 10 | 84 | 5.0E-07 |
| sp|P27476|NSR1_YEAST | Nuclear localization sequence-binding protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NSR1 PE=1 SV=1 | 9 | 93 | 5.0E-07 |
| sp|Q5BGA9|MRD1_EMENI | Multiple RNA-binding domain-containing protein 1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=mrd1 PE=3 SV=1 | 10 | 81 | 5.0E-07 |
| sp|Q5R9Z6|ELAV2_PONAB | ELAV-like protein 2 OS=Pongo abelii GN=ELAVL2 PE=2 SV=1 | 10 | 84 | 5.0E-07 |
| sp|Q12926|ELAV2_HUMAN | ELAV-like protein 2 OS=Homo sapiens GN=ELAVL2 PE=1 SV=2 | 10 | 84 | 5.0E-07 |
| sp|Q54ZS8|PABP2_DICDI | Polyadenylate-binding protein 2 OS=Dictyostelium discoideum GN=pabpn1 PE=3 SV=1 | 7 | 81 | 5.0E-07 |
| sp|Q60899|ELAV2_MOUSE | ELAV-like protein 2 OS=Mus musculus GN=Elavl2 PE=2 SV=1 | 10 | 84 | 5.0E-07 |
| sp|P49311|GRP2_SINAL | Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba PE=2 SV=1 | 10 | 82 | 6.0E-07 |
| sp|Q2QKB4|U2A2B_WHEAT | Splicing factor U2af large subunit B OS=Triticum aestivum GN=U2AF65B PE=2 SV=1 | 10 | 86 | 6.0E-07 |
| sp|Q6IQE0|PU60B_DANRE | Poly(U)-binding-splicing factor PUF60-B OS=Danio rerio GN=puf60b PE=2 SV=2 | 10 | 81 | 6.0E-07 |
| sp|Q93VI4|PABN1_ARATH | Polyadenylate-binding protein 1 OS=Arabidopsis thaliana GN=PABN1 PE=1 SV=1 | 7 | 81 | 7.0E-07 |
| sp|Q5XFR0|EPAB2_MOUSE | Embryonic polyadenylate-binding protein 2 OS=Mus musculus GN=Pabpn1l PE=2 SV=1 | 8 | 81 | 7.0E-07 |
| sp|Q6TY21|EPA2B_XENLA | Embryonic polyadenylate-binding protein 2-B OS=Xenopus laevis GN=Pabpn1l-b PE=1 SV=1 | 8 | 81 | 8.0E-07 |
| sp|Q804A5|EPA2A_XENLA | Embryonic polyadenylate-binding protein 2-A OS=Xenopus laevis GN=Pabpn1l-a PE=1 SV=1 | 7 | 81 | 8.0E-07 |
| sp|P26378|ELAV4_HUMAN | ELAV-like protein 4 OS=Homo sapiens GN=ELAVL4 PE=1 SV=2 | 10 | 84 | 8.0E-07 |
| sp|Q28IQ9|CIRBP_XENTR | Cold-inducible RNA-binding protein OS=Xenopus tropicalis GN=cirbp PE=2 SV=1 | 10 | 82 | 8.0E-07 |
| sp|P53316|YG5B_YEAST | Uncharacterized RNA-binding protein YGR250C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YGR250C PE=1 SV=1 | 10 | 88 | 8.0E-07 |
| sp|Q2GSX8|PABP_CHAGB | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=PAB1 PE=3 SV=1 | 10 | 109 | 8.0E-07 |
| sp|O22703|RZ1B_ARATH | Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana GN=RZ1B PE=2 SV=1 | 10 | 92 | 8.0E-07 |
| sp|Q61701|ELAV4_MOUSE | ELAV-like protein 4 OS=Mus musculus GN=Elavl4 PE=1 SV=1 | 10 | 84 | 8.0E-07 |
| sp|O09032|ELAV4_RAT | ELAV-like protein 4 OS=Rattus norvegicus GN=Elavl4 PE=1 SV=1 | 10 | 84 | 8.0E-07 |
| sp|Q4WJT7|MRD1_ASPFU | Multiple RNA-binding domain-containing protein 1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=mrd1 PE=3 SV=1 | 4 | 81 | 9.0E-07 |
| sp|Q9P3U1|YKX5_SCHPO | Uncharacterized RNA-binding protein C328.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC328.05 PE=3 SV=3 | 6 | 81 | 1.0E-06 |
| sp|O23212|U2A2A_ARATH | Splicing factor U2af large subunit A OS=Arabidopsis thaliana GN=U2AF65A PE=2 SV=2 | 10 | 86 | 1.0E-06 |
| sp|P49310|GRP1_SINAL | Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba PE=2 SV=1 | 10 | 82 | 1.0E-06 |
| sp|Q2QKB3|U2A2A_WHEAT | Splicing factor U2af large subunit A OS=Triticum aestivum GN=U2AF65A PE=2 SV=1 | 10 | 86 | 1.0E-06 |
| sp|Q8CCS6|PABP2_MOUSE | Polyadenylate-binding protein 2 OS=Mus musculus GN=Pabpn1 PE=1 SV=3 | 7 | 81 | 1.0E-06 |
| sp|P39697|RT19_ARATH | 40S ribosomal protein S19, mitochondrial OS=Arabidopsis thaliana GN=RPS19 PE=1 SV=2 | 2 | 87 | 1.0E-06 |
| sp|Q9V3G3|PPIE_DROME | Peptidyl-prolyl cis-trans isomerase E OS=Drosophila melanogaster GN=cyp33 PE=1 SV=1 | 8 | 84 | 1.0E-06 |
| sp|O22315|SR34_ARATH | Serine/arginine-rich-splicing factor SR34 OS=Arabidopsis thaliana GN=SR34 PE=1 SV=1 | 1 | 94 | 1.0E-06 |
| sp|O42923|CIP1_SCHPO | RNA-binding post-transcriptional regulator cip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cip1 PE=1 SV=1 | 10 | 86 | 1.0E-06 |
| sp|P40565|IST3_YEAST | U2 snRNP component IST3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IST3 PE=1 SV=1 | 10 | 84 | 1.0E-06 |
| sp|Q8CH84|ELAV2_RAT | ELAV-like protein 2 OS=Rattus norvegicus GN=Elavl2 PE=1 SV=1 | 15 | 84 | 1.0E-06 |
| sp|Q86U42|PABP2_HUMAN | Polyadenylate-binding protein 2 OS=Homo sapiens GN=PABPN1 PE=1 SV=3 | 7 | 81 | 1.0E-06 |
| sp|Q60900|ELAV3_MOUSE | ELAV-like protein 3 OS=Mus musculus GN=Elavl3 PE=1 SV=1 | 10 | 84 | 1.0E-06 |
| sp|Q14576|ELAV3_HUMAN | ELAV-like protein 3 OS=Homo sapiens GN=ELAVL3 PE=2 SV=3 | 10 | 84 | 1.0E-06 |
| sp|B7P877|NCBP2_IXOSC | Nuclear cap-binding protein subunit 2 OS=Ixodes scapularis GN=Cbp20 PE=3 SV=1 | 7 | 83 | 1.0E-06 |
| sp|Q4R979|RBM4_MACFA | RNA-binding protein 4 OS=Macaca fascicularis GN=RBM4 PE=2 SV=1 | 10 | 109 | 1.0E-06 |
| sp|Q9BWF3|RBM4_HUMAN | RNA-binding protein 4 OS=Homo sapiens GN=RBM4 PE=1 SV=1 | 10 | 109 | 1.0E-06 |
| sp|Q28165|PABP2_BOVIN | Polyadenylate-binding protein 2 OS=Bos taurus GN=PABPN1 PE=1 SV=3 | 7 | 81 | 1.0E-06 |
| sp|B5G279|NCBP2_TAEGU | Nuclear cap-binding protein subunit 2 OS=Taeniopygia guttata GN=NCBP2 PE=2 SV=1 | 7 | 83 | 1.0E-06 |
| sp|Q09868|CIP2_SCHPO | RNA-binding post-transcriptional regulator cip2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cip2 PE=1 SV=1 | 10 | 83 | 2.0E-06 |
| sp|Q03251|RBG8_ARATH | Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana GN=RBG8 PE=1 SV=1 | 10 | 82 | 2.0E-06 |
| sp|O93235|CIRBA_XENLA | Cold-inducible RNA-binding protein A OS=Xenopus laevis GN=cirbp-a PE=1 SV=2 | 10 | 82 | 2.0E-06 |
| sp|P17133|RU17_DROME | U1 small nuclear ribonucleoprotein 70 kDa OS=Drosophila melanogaster GN=snRNP-U1-70K PE=1 SV=2 | 2 | 82 | 2.0E-06 |
| sp|O14102|SAP49_SCHPO | Spliceosome-associated protein 49 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sap49 PE=3 SV=2 | 10 | 89 | 2.0E-06 |
| sp|Q8C7Q4|RBM4_MOUSE | RNA-binding protein 4 OS=Mus musculus GN=Rbm4 PE=1 SV=1 | 10 | 109 | 2.0E-06 |
| sp|Q3MHX3|RBM4_BOVIN | RNA-binding protein 4 OS=Bos taurus GN=RBM4 PE=2 SV=1 | 10 | 109 | 2.0E-06 |
| sp|P19018|TRA2_DROME | Transformer-2 sex-determining protein OS=Drosophila melanogaster GN=tra2 PE=1 SV=1 | 7 | 88 | 2.0E-06 |
| sp|B4NB54|NCBP2_DROWI | Nuclear cap-binding protein subunit 2 OS=Drosophila willistoni GN=Cbp20 PE=3 SV=1 | 5 | 83 | 2.0E-06 |
| sp|Q06AT9|RBM4B_PIG | RNA-binding protein 4B OS=Sus scrofa GN=RBM4B PE=2 SV=1 | 10 | 109 | 2.0E-06 |
| sp|Q05AT9|U1SBP_XENLA | U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Xenopus laevis GN=snrnp35 PE=2 SV=1 | 6 | 87 | 2.0E-06 |
| sp|Q8L716|U2A2B_ARATH | Splicing factor U2af large subunit B OS=Arabidopsis thaliana GN=U2AF65B PE=2 SV=2 | 10 | 81 | 2.0E-06 |
| sp|O22173|PABP4_ARATH | Polyadenylate-binding protein 4 OS=Arabidopsis thaliana GN=PAB4 PE=1 SV=1 | 10 | 83 | 2.0E-06 |
| sp|Q9BQ04|RBM4B_HUMAN | RNA-binding protein 4B OS=Homo sapiens GN=RBM4B PE=1 SV=1 | 10 | 109 | 2.0E-06 |
| sp|Q08BH5|RBM46_DANRE | Probable RNA-binding protein 46 OS=Danio rerio GN=rbm46 PE=2 SV=1 | 8 | 74 | 2.0E-06 |
| sp|Q42404|RU17_ARATH | U1 small nuclear ribonucleoprotein 70 kDa OS=Arabidopsis thaliana GN=RNU1 PE=1 SV=1 | 6 | 82 | 2.0E-06 |
| sp|P19684|ROC5_NICSY | 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1 | 10 | 87 | 3.0E-06 |
| sp|Q9BDY9|RBM4_RABIT | RNA-binding protein 4 OS=Oryctolagus cuniculus GN=RBM4 PE=2 SV=1 | 10 | 109 | 3.0E-06 |
| sp|Q64LC9|RBM4B_RAT | RNA-binding protein 4B OS=Rattus norvegicus GN=Rbm4b PE=1 SV=2 | 10 | 109 | 3.0E-06 |
| sp|Q8VE92|RBM4B_MOUSE | RNA-binding protein 4B OS=Mus musculus GN=Rbm4b PE=1 SV=1 | 10 | 109 | 3.0E-06 |
| sp|P92965|RS40_ARATH | Serine/arginine-rich splicing factor RS40 OS=Arabidopsis thaliana GN=RS40 PE=1 SV=2 | 10 | 91 | 3.0E-06 |
| sp|Q5ZKR5|NCBP2_CHICK | Nuclear cap-binding protein subunit 2 OS=Gallus gallus GN=NCBP2 PE=2 SV=1 | 7 | 83 | 3.0E-06 |
| sp|Q5AJS6|MRD1_CANAL | Multiple RNA-binding domain-containing protein 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=MRD1 PE=3 SV=1 | 10 | 81 | 3.0E-06 |
| sp|O13845|RSD1_SCHPO | RNA-binding protein rsd1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rsd1 PE=1 SV=2 | 6 | 87 | 3.0E-06 |
| sp|Q00916|RU17_YEAST | U1 small nuclear ribonucleoprotein 70 kDa homolog OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SNP1 PE=1 SV=1 | 6 | 89 | 4.0E-06 |
| sp|B4M205|NCB2A_DROVI | Nuclear cap-binding protein subunit 2-A OS=Drosophila virilis GN=Cbp20-A PE=3 SV=1 | 7 | 83 | 4.0E-06 |
| sp|Q9FMP4|SF3B6_ARATH | Splicing factor 3B subunit 6-like protein OS=Arabidopsis thaliana GN=At5g12190 PE=2 SV=1 | 2 | 88 | 4.0E-06 |
| sp|Q8LFS6|BRN1L_ARATH | RNA-binding protein BRN1 OS=Arabidopsis thaliana GN=BRN1 PE=2 SV=1 | 10 | 102 | 4.0E-06 |
| sp|Q10422|YDC1_SCHPO | Uncharacterized RNA-binding protein C25G10.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC25G10.01 PE=1 SV=1 | 10 | 81 | 5.0E-06 |
| sp|P20397|NUCL_XENLA | Nucleolin OS=Xenopus laevis GN=ncl PE=2 SV=3 | 7 | 87 | 5.0E-06 |
| sp|Q54Y98|TRA2_DICDI | Transformer-2 protein homolog OS=Dictyostelium discoideum GN=tra2 PE=3 SV=1 | 6 | 88 | 5.0E-06 |
| sp|Q6PFR5|TRA2A_MOUSE | Transformer-2 protein homolog alpha OS=Mus musculus GN=Tra2a PE=1 SV=1 | 17 | 84 | 5.0E-06 |
| sp|Q13595|TRA2A_HUMAN | Transformer-2 protein homolog alpha OS=Homo sapiens GN=TRA2A PE=1 SV=1 | 17 | 84 | 5.0E-06 |
| sp|P62997|TRA2B_RAT | Transformer-2 protein homolog beta OS=Rattus norvegicus GN=Tra2b PE=1 SV=1 | 17 | 84 | 6.0E-06 |
| sp|P62996|TRA2B_MOUSE | Transformer-2 protein homolog beta OS=Mus musculus GN=Tra2b PE=1 SV=1 | 17 | 84 | 6.0E-06 |
| sp|P62995|TRA2B_HUMAN | Transformer-2 protein homolog beta OS=Homo sapiens GN=TRA2B PE=1 SV=1 | 17 | 84 | 6.0E-06 |
| sp|Q3ZBT6|TRA2B_BOVIN | Transformer-2 protein homolog beta OS=Bos taurus GN=TRA2B PE=2 SV=1 | 17 | 84 | 6.0E-06 |
| sp|P90978|U2AF2_CAEEL | Splicing factor U2AF 65 kDa subunit OS=Caenorhabditis elegans GN=uaf-1 PE=2 SV=2 | 10 | 129 | 6.0E-06 |
| sp|Q1ZXC2|PAP1B_DICDI | Polyadenylate-binding protein 1-B OS=Dictyostelium discoideum GN=pabpc1B PE=3 SV=1 | 10 | 119 | 6.0E-06 |
| sp|P20397|NUCL_XENLA | Nucleolin OS=Xenopus laevis GN=ncl PE=2 SV=3 | 7 | 84 | 7.0E-06 |
| sp|Q5U259|ELV1B_XENLA | ELAV-like protein 1-B OS=Xenopus laevis GN=elavl1-b PE=1 SV=1 | 10 | 84 | 7.0E-06 |
| sp|O14327|PAB2_SCHPO | Polyadenylate-binding protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pab2 PE=1 SV=1 | 10 | 58 | 7.0E-06 |
| sp|P27476|NSR1_YEAST | Nuclear localization sequence-binding protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NSR1 PE=1 SV=1 | 6 | 84 | 8.0E-06 |
| sp|Q00539|NAM8_YEAST | Protein NAM8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NAM8 PE=1 SV=2 | 10 | 104 | 8.0E-06 |
| sp|Q8GZ26|BRN2L_ARATH | RNA-binding protein BRN2 OS=Arabidopsis thaliana GN=BRN2 PE=2 SV=1 | 10 | 86 | 9.0E-06 |
| sp|Q6NQ72|THO4D_ARATH | THO complex subunit 4D OS=Arabidopsis thaliana GN=ALY4 PE=1 SV=1 | 10 | 83 | 9.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0031124 | mRNA 3'-end processing | Yes |
| GO:0003723 | RNA binding | Yes |
| GO:0008152 | metabolic process | No |
| GO:0046483 | heterocycle metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0005488 | binding | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0031123 | RNA 3'-end processing | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:0003676 | nucleic acid binding | No |
| GO:0006139 | nucleobase-containing compound metabolic process | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0009987 | cellular process | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0016071 | mRNA metabolic process | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0006397 | mRNA processing | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0016070 | RNA metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0006396 | RNA processing | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0090304 | nucleic acid metabolic process | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | 0.5849 | 0.6081 | 0.0306 | 0.0167 | 0.0449 | 0.001 | 0.1455 | 0.0194 | 0.0166 | 0.0056 |
| Orthofinder run ID | 4 |
| Orthogroup | 3934 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|7834 MSTRPPSRVVFVGNIPYGLSEEQITDIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAVRNLNDYEIM GRKLRVDFSNEQKGGDDDNNNNQSSSSLNLHAANGAGMVSQSGSLPPLPAGKEIPPGLTCTDAISRTLNTLPPPQ LLDILGQMKTLASSDPQRATELLQQAPQLSYAVFQAILLMGLVSPEAIQSVAELGAPHSQPAPVAGFPGAMPGYP AANNTPPVAGLPYAPPAMAAQGYGASSAPPTAAQDPDALIRQVMELPQAQIDMLPEAEKQQILALRATFLAQQRR * |
| Coding | >Hirsu2|7834 ATGTCGACCAGACCTCCGTCGCGCGTCGTCTTTGTCGGCAACATTCCATATGGCCTGTCCGAGGAGCAAATCACA GACATCTTCTCCAGCGCCGGCAAAGTCGAGCGGTTCCGCCTCGTCTACGACTCCGAGACTGGGCGCCCCAAGGGC TTCGGCTTTGCCGACTACCCCGACACCGACTCTGCTTCTTCGGCCGTGCGCAACCTCAACGACTACGAGATCATG GGCCGCAAGTTACGCGTCGACTTTTCCAACGAGCAGAAAGGCGGCGACGACGACAACAATAACAACCAGTCCTCT TCGTCGCTGAACCTGCATGCCGCCAATGGCGCCGGCATGGTGTCGCAATCAGGCTCCCTGCCGCCACTGCCCGCC GGCAAGGAGATACCGCCGGGCCTGACGTGCACCGACGCCATTTCGCGGACGCTCAACACGCTCCCGCCGCCACAG CTCCTCGACATCCTCGGCCAGATGAAGACGCTGGCGTCGTCGGACCCCCAACGAGCGACCGAGCTCCTGCAGCAA GCGCCGCAGCTCTCGTACGCCGTCTTCCAGGCCATCCTCCTCATGGGCCTCGTCTCGCCCGAGGCCATCCAGTCC GTGGCCGAGCTCGGCGCCCCCCACTCCCAGCCAGCGCCCGTCGCCGGCTTCCCCGGCGCGATGCCCGGCTATCCC GCCGCGAACAACACGCCGCCCGTCGCCGGATTGCCCTACGCGCCGCCGGCGATGGCCGCGCAGGGCTACGGCGCG TCGTCGGCCCCGCCGACCGCCGCGCAAGATCCCGATGCCCTAATACGACAGGTCATGGAGCTGCCGCAGGCCCAG ATCGACATGCTGCCCGAGGCGGAGAAGCAGCAGATCCTCGCCCTCCGGGCCACGTTCCTGGCTCAACAACGGAGA TGA |
| Transcript | >Hirsu2|7834 ATGTCGACCAGACCTCCGTCGCGCGTCGTCTTTGTCGGCAACATTCCATATGGCCTGTCCGAGGAGCAAATCACA GACATCTTCTCCAGCGCCGGCAAAGTCGAGCGGTTCCGCCTCGTCTACGACTCCGAGACTGGGCGCCCCAAGGGC TTCGGCTTTGCCGACTACCCCGACACCGACTCTGCTTCTTCGGCCGTGCGCAACCTCAACGACTACGAGATCATG GGCCGCAAGTTACGCGTCGACTTTTCCAACGAGCAGAAAGGCGGCGACGACGACAACAATAACAACCAGTCCTCT TCGTCGCTGAACCTGCATGCCGCCAATGGCGCCGGCATGGTGTCGCAATCAGGCTCCCTGCCGCCACTGCCCGCC GGCAAGGAGATACCGCCGGGCCTGACGTGCACCGACGCCATTTCGCGGACGCTCAACACGCTCCCGCCGCCACAG CTCCTCGACATCCTCGGCCAGATGAAGACGCTGGCGTCGTCGGACCCCCAACGAGCGACCGAGCTCCTGCAGCAA GCGCCGCAGCTCTCGTACGCCGTCTTCCAGGCCATCCTCCTCATGGGCCTCGTCTCGCCCGAGGCCATCCAGTCC GTGGCCGAGCTCGGCGCCCCCCACTCCCAGCCAGCGCCCGTCGCCGGCTTCCCCGGCGCGATGCCCGGCTATCCC GCCGCGAACAACACGCCGCCCGTCGCCGGATTGCCCTACGCGCCGCCGGCGATGGCCGCGCAGGGCTACGGCGCG TCGTCGGCCCCGCCGACCGCCGCGCAAGATCCCGATGCCCTAATACGACAGGTCATGGAGCTGCCGCAGGCCCAG ATCGACATGCTGCCCGAGGCGGAGAAGCAGCAGATCCTCGCCCTCCGGGCCACGTTCCTGGCTCAACAACGGAGA TGA |
| Gene | >Hirsu2|7834 ATGTCGACCAGACCTCCGTCGCGCGTCGTCTTTGTCGGCAACATTCCATATGGTACGCCCGGTCGAGTCTGCCCT TCTTCCTCGAAATCCATCTCTCCGACCTCGGTCGCCCAAGAAAAGGAAGGGCCAAGCAAAAACCGAGGGCAGTGA ATGCTGACAGAGTCAACAGGCCTGTCCGAGGAGCAAATCACAGACATCTTCTCCAGCGCCGGCAAAGTCGAGCGG TTCCGCCTCGTCTACGACTCCGAGACTGGGCGCCCCAAGGGCTTCGGCTTTGCCGACTACCCCGACACCGGTCTG TGGCCTTGTCCCCATCCGTGGCTGGCGCAGAAGAATCTCATGACCAGGCGCAGACTCTGCTTCTTCGGCCGTGCG CAACCTCAACGACTACGAGATCATGGGCCGCAAGTTACGCGTCGACTTTTCCAACGAGCAGAAAGGCGGCGACGA CGACAACAATAACAACCAGGTAAGCGGCGCCTCCCCTCCCCGTACACCCGCCTCGGCCGTGCCACCTGCTGACCC GGACCGCCAACAACCCAGTCCTCTTCGTCGCTGAACCTGCATGCCGCCAATGGCGCCGGCATGGTGTCGCAATCA GGCTCCCTGCCGCCACTGCCCGCCGGCAAGGAGATACCGCCGGGCCTGACGTGCACCGACGCCATTTCGCGGACG CTCAACACGCTCCCGCCGCCACAGCTCCTCGACATCCTCGGCCAGATGAAGACGCTGGCGTCGTCGGACCCCCAA CGAGCGACCGAGCTCCTGCAGCAAGCGCCGCAGCTCTCGTACGCCGTCTTCCAGGCCATCCTCCTCATGGGCCTC GTCTCGCCCGAGGCCATCCAGTCCGTGGCCGAGCTCGGCGCCCCCCACTCCCAGCCAGCGCCCGTCGCCGGCTTC CCCGGCGCGATGCCCGGCTATCCCGCCGCGAACAACACGCCGCCCGTCGCCGGATTGCCCTACGCGCCGCCGGCG ATGGCCGCGCAGGGCTACGGCGCGTCGTCGGCCCCGCCGACCGCCGCGCAAGATCCCGATGCCCTAATACGACAG GTCATGGAGCTGCCGCAGGCCCAGATCGACATGCTGCCCGAGGCGGAGAAGCAGCAGATCCTCGCCCTCCGGGCC ACGTTCCTGGCTCAACAACGGAGATGA |