Protein ID | Hirsu2|7821 |
Gene name | |
Location | Contig_478:6109..7540 |
Strand | - |
Gene length (bp) | 1431 |
Transcript length (bp) | 1248 |
Coding sequence length (bp) | 1248 |
Protein length (aa) | 416 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 43 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 20 | 42 | 22 |
2 | 54 | 76 | 22 |
3 | 102 | 124 | 22 |
4 | 136 | 158 | 22 |
5 | 193 | 215 | 22 |
6 | 222 | 244 | 22 |
7 | 259 | 281 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|7821 MSSPASPPPGLPPQEDHSGPLQAVWWTCFAVATTFILLRVWARLLRRSLGYDDVTMGLAWLCFVADMILVHYIAV TGRTQHLQWIAVQGGVPAVERMLELYVVVLAVGIFLTGLGKVAIGITILRIIGNTSKWQRAAVWIVLFLTVATCI IDFCLSVFRCGLPRNTWTIASWSTAQCVPSDVQTNINTWANSVQVFADFAFSILPMAIVYGLRIPPRHKRFLIVA LGLTLITGAAGTLKTVYAATMDHADLSYAIFPSLVWFAVESMLIFVCGSVPALYPLYESYMKPRRLGYGSHGSAA KLRASSKTAADSSGYPGSKASASSNPSSAKRPWTTTTTATAGSGFGDSSVSTAHDEEAPDMELAHLTTTQLAATS VSTMPRPYDPNSWRRGGQIAVVREVAVSSSRGRDSPRAIV* |
Coding | >Hirsu2|7821 ATGTCCTCGCCAGCGAGTCCGCCCCCCGGCCTGCCCCCGCAAGAAGATCACAGCGGGCCGCTGCAGGCGGTATGG TGGACCTGCTTCGCCGTCGCGACCACCTTCATCCTGCTCCGTGTCTGGGCTCGGCTTCTCAGGCGCAGTCTGGGC TACGATGATGTGACCATGGGCCTTGCCTGGCTATGCTTCGTGGCCGACATGATCCTGGTTCATTATATCGCTGTC ACGGGTCGGACGCAGCACCTGCAGTGGATCGCGGTGCAGGGCGGCGTCCCGGCCGTGGAGAGGATGCTGGAGCTC TACGTCGTCGTGCTCGCCGTCGGCATCTTCTTGACGGGGCTGGGCAAGGTCGCCATCGGCATCACCATCCTGCGC ATCATCGGCAACACGTCCAAGTGGCAGCGGGCGGCCGTGTGGATCGTGCTGTTCCTGACCGTCGCCACCTGCATC ATCGACTTCTGCCTCAGCGTCTTCCGCTGCGGCCTGCCGCGCAACACGTGGACCATCGCGAGCTGGTCGACGGCG CAGTGCGTGCCGTCCGACGTCCAGACCAACATCAACACGTGGGCCAACAGCGTCCAGGTCTTCGCCGACTTCGCC TTCTCCATCCTGCCCATGGCCATCGTGTACGGCCTGCGGATCCCGCCGCGGCACAAGCGCTTCCTCATCGTCGCC CTCGGCCTCACGCTCATCACCGGCGCCGCCGGCACGCTCAAGACCGTCTACGCCGCCACCATGGACCACGCCGAC CTCAGCTACGCCATCTTCCCCTCGCTCGTCTGGTTCGCGGTCGAGTCGATGCTCATCTTCGTCTGCGGCTCCGTC CCGGCCCTGTACCCGCTGTACGAGAGCTACATGAAGCCGCGCCGGCTGGGCTACGGCTCCCACGGCTCGGCCGCC AAGCTGCGGGCCTCGTCCAAGACGGCCGCCGACTCGTCCGGCTACCCCGGCTCCAAGGCGTCCGCCTCATCGAAC CCCTCGTCCGCCAAGAGGCCGTGGACGACGACGACGACGGCCACGGCCGGCAGCGGCTTCGGCGACTCCTCCGTC TCCACCGCCCACGACGAGGAGGCGCCCGACATGGAGCTTGCGCACCTGACGACGACCCAGCTGGCCGCGACCTCG GTCAGCACGATGCCGCGGCCCTACGACCCCAACAGCTGGCGGCGAGGCGGGCAGATTGCCGTCGTTCGCGAGGTT GCCGTCAGCTCGAGCCGGGGCCGGGACTCTCCGCGAGCGATCGTGTGA |
Transcript | >Hirsu2|7821 ATGTCCTCGCCAGCGAGTCCGCCCCCCGGCCTGCCCCCGCAAGAAGATCACAGCGGGCCGCTGCAGGCGGTATGG TGGACCTGCTTCGCCGTCGCGACCACCTTCATCCTGCTCCGTGTCTGGGCTCGGCTTCTCAGGCGCAGTCTGGGC TACGATGATGTGACCATGGGCCTTGCCTGGCTATGCTTCGTGGCCGACATGATCCTGGTTCATTATATCGCTGTC ACGGGTCGGACGCAGCACCTGCAGTGGATCGCGGTGCAGGGCGGCGTCCCGGCCGTGGAGAGGATGCTGGAGCTC TACGTCGTCGTGCTCGCCGTCGGCATCTTCTTGACGGGGCTGGGCAAGGTCGCCATCGGCATCACCATCCTGCGC ATCATCGGCAACACGTCCAAGTGGCAGCGGGCGGCCGTGTGGATCGTGCTGTTCCTGACCGTCGCCACCTGCATC ATCGACTTCTGCCTCAGCGTCTTCCGCTGCGGCCTGCCGCGCAACACGTGGACCATCGCGAGCTGGTCGACGGCG CAGTGCGTGCCGTCCGACGTCCAGACCAACATCAACACGTGGGCCAACAGCGTCCAGGTCTTCGCCGACTTCGCC TTCTCCATCCTGCCCATGGCCATCGTGTACGGCCTGCGGATCCCGCCGCGGCACAAGCGCTTCCTCATCGTCGCC CTCGGCCTCACGCTCATCACCGGCGCCGCCGGCACGCTCAAGACCGTCTACGCCGCCACCATGGACCACGCCGAC CTCAGCTACGCCATCTTCCCCTCGCTCGTCTGGTTCGCGGTCGAGTCGATGCTCATCTTCGTCTGCGGCTCCGTC CCGGCCCTGTACCCGCTGTACGAGAGCTACATGAAGCCGCGCCGGCTGGGCTACGGCTCCCACGGCTCGGCCGCC AAGCTGCGGGCCTCGTCCAAGACGGCCGCCGACTCGTCCGGCTACCCCGGCTCCAAGGCGTCCGCCTCATCGAAC CCCTCGTCCGCCAAGAGGCCGTGGACGACGACGACGACGGCCACGGCCGGCAGCGGCTTCGGCGACTCCTCCGTC TCCACCGCCCACGACGAGGAGGCGCCCGACATGGAGCTTGCGCACCTGACGACGACCCAGCTGGCCGCGACCTCG GTCAGCACGATGCCGCGGCCCTACGACCCCAACAGCTGGCGGCGAGGCGGGCAGATTGCCGTCGTTCGCGAGGTT GCCGTCAGCTCGAGCCGGGGCCGGGACTCTCCGCGAGCGATCGTGTGA |
Gene | >Hirsu2|7821 ATGTCCTCGCCAGCGAGTCCGCCCCCCGGCCTGCCCCCGCAAGAAGATCACAGCGGGCCGCTGCAGGCGGTATGG TGGACCTGCTTCGCCGTCGCGACCACCTTCATCCTGCTCCGTGTCTGGGCTCGGCTTCTCAGGCGCAGTCTGGGC TACGATGATGTGACCATGGGCCTTGCCTGGGTGCGCAAAGAACCCCCCCTCCCTTTCTCGTGCCTTTGTCGAGAT GTCGTCGCCAACATCCGTGTTGCTTGCCTCGTGTAGCTATGCTTCGTGGCCGACATGATCCTGGGTATGTGTATC GCGATATCCCCGTGTCTGTCCAAGTACATATCCAGGCCGGTCGAGCTGACGACGACGACAACGACGACGCAACTA ACGGATAACACTGCAGTTCATTATATCGCTGTCACGGGTCGGACGCAGCACCTGCAGTGGATCGCGGTGCAGGGC GGCGTCCCGGCCGTGGAGAGGATGCTGGAGCTCTACGTCGTCGTGCTCGCCGTCGGCATCTTCTTGACGGGGCTG GGCAAGGTCGCCATCGGCATCACCATCCTGCGCATCATCGGCAACACGTCCAAGTGGCAGCGGGCGGCCGTGTGG ATCGTGCTGTTCCTGACCGTCGCCACCTGCATCATCGACTTCTGCCTCAGCGTCTTCCGCTGCGGCCTGCCGCGC AACACGTGGACCATCGCGAGCTGGTCGACGGCGCAGTGCGTGCCGTCCGACGTCCAGACCAACATCAACACGTGG GCCAACAGCGTCCAGGTCTTCGCCGACTTCGCCTTCTCCATCCTGCCCATGGCCATCGTGTACGGCCTGCGGATC CCGCCGCGGCACAAGCGCTTCCTCATCGTCGCCCTCGGCCTCACGCTCATCACCGGCGCCGCCGGCACGCTCAAG ACCGTCTACGCCGCCACCATGGACCACGCCGACCTCAGCTACGCCATCTTCCCCTCGCTCGTCTGGTTCGCGGTC GAGTCGATGCTCATCTTCGTCTGCGGCTCCGTCCCGGCCCTGTACCCGCTGTACGAGAGCTACATGAAGCCGCGC CGGCTGGGCTACGGCTCCCACGGCTCGGCCGCCAAGCTGCGGGCCTCGTCCAAGACGGCCGCCGACTCGTCCGGC TACCCCGGCTCCAAGGCGTCCGCCTCATCGAACCCCTCGTCCGCCAAGAGGCCGTGGACGACGACGACGACGGCC ACGGCCGGCAGCGGCTTCGGCGACTCCTCCGTCTCCACCGCCCACGACGAGGAGGCGCCCGACATGGAGCTTGCG CACCTGACGACGACCCAGCTGGCCGCGACCTCGGTCAGCACGATGCCGCGGCCCTACGACCCCAACAGCTGGCGG CGAGGCGGGCAGATTGCCGTCGTTCGCGAGGTTGCCGTCAGCTCGAGCCGGGGCCGGGACTCTCCGCGAGCGATC GTGTGA |