Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7821
Gene name
LocationContig_478:6109..7540
Strand-
Gene length (bp)1431
Transcript length (bp)1248
Coding sequence length (bp)1248
Protein length (aa) 416

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 43 0.5

Transmembrane Domains

Domain # Start End Length
1 20 42 22
2 54 76 22
3 102 124 22
4 136 158 22
5 193 215 22
6 222 244 22
7 259 281 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7821
MSSPASPPPGLPPQEDHSGPLQAVWWTCFAVATTFILLRVWARLLRRSLGYDDVTMGLAWLCFVADMILVHYIAV
TGRTQHLQWIAVQGGVPAVERMLELYVVVLAVGIFLTGLGKVAIGITILRIIGNTSKWQRAAVWIVLFLTVATCI
IDFCLSVFRCGLPRNTWTIASWSTAQCVPSDVQTNINTWANSVQVFADFAFSILPMAIVYGLRIPPRHKRFLIVA
LGLTLITGAAGTLKTVYAATMDHADLSYAIFPSLVWFAVESMLIFVCGSVPALYPLYESYMKPRRLGYGSHGSAA
KLRASSKTAADSSGYPGSKASASSNPSSAKRPWTTTTTATAGSGFGDSSVSTAHDEEAPDMELAHLTTTQLAATS
VSTMPRPYDPNSWRRGGQIAVVREVAVSSSRGRDSPRAIV*
Coding >Hirsu2|7821
ATGTCCTCGCCAGCGAGTCCGCCCCCCGGCCTGCCCCCGCAAGAAGATCACAGCGGGCCGCTGCAGGCGGTATGG
TGGACCTGCTTCGCCGTCGCGACCACCTTCATCCTGCTCCGTGTCTGGGCTCGGCTTCTCAGGCGCAGTCTGGGC
TACGATGATGTGACCATGGGCCTTGCCTGGCTATGCTTCGTGGCCGACATGATCCTGGTTCATTATATCGCTGTC
ACGGGTCGGACGCAGCACCTGCAGTGGATCGCGGTGCAGGGCGGCGTCCCGGCCGTGGAGAGGATGCTGGAGCTC
TACGTCGTCGTGCTCGCCGTCGGCATCTTCTTGACGGGGCTGGGCAAGGTCGCCATCGGCATCACCATCCTGCGC
ATCATCGGCAACACGTCCAAGTGGCAGCGGGCGGCCGTGTGGATCGTGCTGTTCCTGACCGTCGCCACCTGCATC
ATCGACTTCTGCCTCAGCGTCTTCCGCTGCGGCCTGCCGCGCAACACGTGGACCATCGCGAGCTGGTCGACGGCG
CAGTGCGTGCCGTCCGACGTCCAGACCAACATCAACACGTGGGCCAACAGCGTCCAGGTCTTCGCCGACTTCGCC
TTCTCCATCCTGCCCATGGCCATCGTGTACGGCCTGCGGATCCCGCCGCGGCACAAGCGCTTCCTCATCGTCGCC
CTCGGCCTCACGCTCATCACCGGCGCCGCCGGCACGCTCAAGACCGTCTACGCCGCCACCATGGACCACGCCGAC
CTCAGCTACGCCATCTTCCCCTCGCTCGTCTGGTTCGCGGTCGAGTCGATGCTCATCTTCGTCTGCGGCTCCGTC
CCGGCCCTGTACCCGCTGTACGAGAGCTACATGAAGCCGCGCCGGCTGGGCTACGGCTCCCACGGCTCGGCCGCC
AAGCTGCGGGCCTCGTCCAAGACGGCCGCCGACTCGTCCGGCTACCCCGGCTCCAAGGCGTCCGCCTCATCGAAC
CCCTCGTCCGCCAAGAGGCCGTGGACGACGACGACGACGGCCACGGCCGGCAGCGGCTTCGGCGACTCCTCCGTC
TCCACCGCCCACGACGAGGAGGCGCCCGACATGGAGCTTGCGCACCTGACGACGACCCAGCTGGCCGCGACCTCG
GTCAGCACGATGCCGCGGCCCTACGACCCCAACAGCTGGCGGCGAGGCGGGCAGATTGCCGTCGTTCGCGAGGTT
GCCGTCAGCTCGAGCCGGGGCCGGGACTCTCCGCGAGCGATCGTGTGA
Transcript >Hirsu2|7821
ATGTCCTCGCCAGCGAGTCCGCCCCCCGGCCTGCCCCCGCAAGAAGATCACAGCGGGCCGCTGCAGGCGGTATGG
TGGACCTGCTTCGCCGTCGCGACCACCTTCATCCTGCTCCGTGTCTGGGCTCGGCTTCTCAGGCGCAGTCTGGGC
TACGATGATGTGACCATGGGCCTTGCCTGGCTATGCTTCGTGGCCGACATGATCCTGGTTCATTATATCGCTGTC
ACGGGTCGGACGCAGCACCTGCAGTGGATCGCGGTGCAGGGCGGCGTCCCGGCCGTGGAGAGGATGCTGGAGCTC
TACGTCGTCGTGCTCGCCGTCGGCATCTTCTTGACGGGGCTGGGCAAGGTCGCCATCGGCATCACCATCCTGCGC
ATCATCGGCAACACGTCCAAGTGGCAGCGGGCGGCCGTGTGGATCGTGCTGTTCCTGACCGTCGCCACCTGCATC
ATCGACTTCTGCCTCAGCGTCTTCCGCTGCGGCCTGCCGCGCAACACGTGGACCATCGCGAGCTGGTCGACGGCG
CAGTGCGTGCCGTCCGACGTCCAGACCAACATCAACACGTGGGCCAACAGCGTCCAGGTCTTCGCCGACTTCGCC
TTCTCCATCCTGCCCATGGCCATCGTGTACGGCCTGCGGATCCCGCCGCGGCACAAGCGCTTCCTCATCGTCGCC
CTCGGCCTCACGCTCATCACCGGCGCCGCCGGCACGCTCAAGACCGTCTACGCCGCCACCATGGACCACGCCGAC
CTCAGCTACGCCATCTTCCCCTCGCTCGTCTGGTTCGCGGTCGAGTCGATGCTCATCTTCGTCTGCGGCTCCGTC
CCGGCCCTGTACCCGCTGTACGAGAGCTACATGAAGCCGCGCCGGCTGGGCTACGGCTCCCACGGCTCGGCCGCC
AAGCTGCGGGCCTCGTCCAAGACGGCCGCCGACTCGTCCGGCTACCCCGGCTCCAAGGCGTCCGCCTCATCGAAC
CCCTCGTCCGCCAAGAGGCCGTGGACGACGACGACGACGGCCACGGCCGGCAGCGGCTTCGGCGACTCCTCCGTC
TCCACCGCCCACGACGAGGAGGCGCCCGACATGGAGCTTGCGCACCTGACGACGACCCAGCTGGCCGCGACCTCG
GTCAGCACGATGCCGCGGCCCTACGACCCCAACAGCTGGCGGCGAGGCGGGCAGATTGCCGTCGTTCGCGAGGTT
GCCGTCAGCTCGAGCCGGGGCCGGGACTCTCCGCGAGCGATCGTGTGA
Gene >Hirsu2|7821
ATGTCCTCGCCAGCGAGTCCGCCCCCCGGCCTGCCCCCGCAAGAAGATCACAGCGGGCCGCTGCAGGCGGTATGG
TGGACCTGCTTCGCCGTCGCGACCACCTTCATCCTGCTCCGTGTCTGGGCTCGGCTTCTCAGGCGCAGTCTGGGC
TACGATGATGTGACCATGGGCCTTGCCTGGGTGCGCAAAGAACCCCCCCTCCCTTTCTCGTGCCTTTGTCGAGAT
GTCGTCGCCAACATCCGTGTTGCTTGCCTCGTGTAGCTATGCTTCGTGGCCGACATGATCCTGGGTATGTGTATC
GCGATATCCCCGTGTCTGTCCAAGTACATATCCAGGCCGGTCGAGCTGACGACGACGACAACGACGACGCAACTA
ACGGATAACACTGCAGTTCATTATATCGCTGTCACGGGTCGGACGCAGCACCTGCAGTGGATCGCGGTGCAGGGC
GGCGTCCCGGCCGTGGAGAGGATGCTGGAGCTCTACGTCGTCGTGCTCGCCGTCGGCATCTTCTTGACGGGGCTG
GGCAAGGTCGCCATCGGCATCACCATCCTGCGCATCATCGGCAACACGTCCAAGTGGCAGCGGGCGGCCGTGTGG
ATCGTGCTGTTCCTGACCGTCGCCACCTGCATCATCGACTTCTGCCTCAGCGTCTTCCGCTGCGGCCTGCCGCGC
AACACGTGGACCATCGCGAGCTGGTCGACGGCGCAGTGCGTGCCGTCCGACGTCCAGACCAACATCAACACGTGG
GCCAACAGCGTCCAGGTCTTCGCCGACTTCGCCTTCTCCATCCTGCCCATGGCCATCGTGTACGGCCTGCGGATC
CCGCCGCGGCACAAGCGCTTCCTCATCGTCGCCCTCGGCCTCACGCTCATCACCGGCGCCGCCGGCACGCTCAAG
ACCGTCTACGCCGCCACCATGGACCACGCCGACCTCAGCTACGCCATCTTCCCCTCGCTCGTCTGGTTCGCGGTC
GAGTCGATGCTCATCTTCGTCTGCGGCTCCGTCCCGGCCCTGTACCCGCTGTACGAGAGCTACATGAAGCCGCGC
CGGCTGGGCTACGGCTCCCACGGCTCGGCCGCCAAGCTGCGGGCCTCGTCCAAGACGGCCGCCGACTCGTCCGGC
TACCCCGGCTCCAAGGCGTCCGCCTCATCGAACCCCTCGTCCGCCAAGAGGCCGTGGACGACGACGACGACGGCC
ACGGCCGGCAGCGGCTTCGGCGACTCCTCCGTCTCCACCGCCCACGACGAGGAGGCGCCCGACATGGAGCTTGCG
CACCTGACGACGACCCAGCTGGCCGCGACCTCGGTCAGCACGATGCCGCGGCCCTACGACCCCAACAGCTGGCGG
CGAGGCGGGCAGATTGCCGTCGTTCGCGAGGTTGCCGTCAGCTCGAGCCGGGGCCGGGACTCTCCGCGAGCGATC
GTGTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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