Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7820
Gene name
LocationContig_478:4272..5505
Strand-
Gene length (bp)1233
Transcript length (bp)1143
Coding sequence length (bp)1143
Protein length (aa) 381

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 32 0.45

Transmembrane Domains

Domain # Start End Length
1 9 31 22
2 86 108 22
3 129 151 22
4 171 193 22
5 206 228 22
6 255 272 17
7 307 329 22
8 339 361 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7820
MARLWRGRLIRAVAASPFLLLSLLCLSLMDAEKMGKQWQPMLDAGRIEWDGGSVPILSAFYHNKILDDFWRGLTV
LFSPSTLGYDPVAWWVGFVFVIHLAPLYAIWMLESHRAVSTSGPARLPTIFTSLGQALGSGVVAPVFYFLCLVFG
RPSSDLARLKSEGKSARSWEIRPVPFMLPLVLLLHMVGVSAAFLAPRFETRHFWTWTWLLSPMALGFGDAVLARL
FYAPAPCSLERRGREGQGRQKRSAFGSPELQLGALAVLSAGTWIYMLARAPFSLSDIFVPETIAAQDDFILHSRV
IMQLDCLVTFGASLLWLLYVCFDLARAGVLTEADGLSLFGLLPVVLAAGGPGTACAVLWGWKERAAQRWVAGCEE
EGHDD*
Coding >Hirsu2|7820
ATGGCGCGACTCTGGAGAGGGCGTCTCATCCGCGCCGTGGCCGCCTCGCCGTTCCTGCTCCTGTCCCTGCTATGC
CTGAGCCTCATGGACGCGGAAAAGATGGGCAAGCAATGGCAGCCGATGCTCGACGCGGGCCGGATAGAGTGGGAC
GGCGGCTCCGTCCCGATCCTGTCGGCGTTTTATCACAACAAGATACTGGACGACTTCTGGCGCGGACTGACCGTC
TTGTTCTCGCCGTCCACGCTGGGCTACGACCCCGTCGCCTGGTGGGTTGGCTTCGTTTTTGTCATTCATCTCGCG
CCGCTTTACGCCATCTGGATGCTGGAATCGCATCGCGCGGTCAGCACCAGCGGCCCGGCCAGGCTTCCGACAATC
TTCACCAGCCTCGGCCAGGCTCTTGGCTCTGGCGTCGTCGCGCCCGTCTTCTACTTCCTGTGCCTCGTCTTCGGC
CGCCCGAGCTCGGATCTGGCCCGCCTCAAGTCGGAGGGGAAGTCGGCAAGGTCGTGGGAAATCCGTCCCGTCCCG
TTCATGCTGCCTCTCGTTCTGCTGTTGCACATGGTCGGCGTCAGTGCCGCGTTTCTCGCCCCGCGGTTCGAGACG
CGACACTTCTGGACTTGGACCTGGCTGCTCTCGCCCATGGCCCTTGGGTTCGGCGACGCAGTGCTGGCGCGCCTG
TTCTACGCGCCGGCTCCTTGCTCTCTTGAAAGGCGAGGACGAGAAGGGCAGGGAAGGCAGAAGCGCAGCGCGTTT
GGGTCACCGGAGCTGCAACTCGGAGCTCTGGCCGTTCTGTCGGCTGGCACCTGGATTTACATGCTCGCGCGCGCC
CCCTTCTCCCTGTCCGACATCTTTGTGCCCGAGACGATTGCGGCACAGGACGACTTCATCCTGCACTCGCGGGTC
ATCATGCAGCTCGACTGCCTCGTTACCTTCGGCGCCTCCCTGTTGTGGCTGCTGTACGTCTGTTTCGATCTCGCC
AGGGCTGGTGTTCTCACTGAGGCCGATGGACTCTCCCTCTTTGGTCTCTTGCCCGTCGTCCTGGCCGCGGGAGGG
CCGGGGACGGCTTGCGCGGTTCTCTGGGGTTGGAAGGAGAGGGCGGCACAGAGATGGGTTGCAGGATGTGAAGAA
GAAGGGCATGACGACTGA
Transcript >Hirsu2|7820
ATGGCGCGACTCTGGAGAGGGCGTCTCATCCGCGCCGTGGCCGCCTCGCCGTTCCTGCTCCTGTCCCTGCTATGC
CTGAGCCTCATGGACGCGGAAAAGATGGGCAAGCAATGGCAGCCGATGCTCGACGCGGGCCGGATAGAGTGGGAC
GGCGGCTCCGTCCCGATCCTGTCGGCGTTTTATCACAACAAGATACTGGACGACTTCTGGCGCGGACTGACCGTC
TTGTTCTCGCCGTCCACGCTGGGCTACGACCCCGTCGCCTGGTGGGTTGGCTTCGTTTTTGTCATTCATCTCGCG
CCGCTTTACGCCATCTGGATGCTGGAATCGCATCGCGCGGTCAGCACCAGCGGCCCGGCCAGGCTTCCGACAATC
TTCACCAGCCTCGGCCAGGCTCTTGGCTCTGGCGTCGTCGCGCCCGTCTTCTACTTCCTGTGCCTCGTCTTCGGC
CGCCCGAGCTCGGATCTGGCCCGCCTCAAGTCGGAGGGGAAGTCGGCAAGGTCGTGGGAAATCCGTCCCGTCCCG
TTCATGCTGCCTCTCGTTCTGCTGTTGCACATGGTCGGCGTCAGTGCCGCGTTTCTCGCCCCGCGGTTCGAGACG
CGACACTTCTGGACTTGGACCTGGCTGCTCTCGCCCATGGCCCTTGGGTTCGGCGACGCAGTGCTGGCGCGCCTG
TTCTACGCGCCGGCTCCTTGCTCTCTTGAAAGGCGAGGACGAGAAGGGCAGGGAAGGCAGAAGCGCAGCGCGTTT
GGGTCACCGGAGCTGCAACTCGGAGCTCTGGCCGTTCTGTCGGCTGGCACCTGGATTTACATGCTCGCGCGCGCC
CCCTTCTCCCTGTCCGACATCTTTGTGCCCGAGACGATTGCGGCACAGGACGACTTCATCCTGCACTCGCGGGTC
ATCATGCAGCTCGACTGCCTCGTTACCTTCGGCGCCTCCCTGTTGTGGCTGCTGTACGTCTGTTTCGATCTCGCC
AGGGCTGGTGTTCTCACTGAGGCCGATGGACTCTCCCTCTTTGGTCTCTTGCCCGTCGTCCTGGCCGCGGGAGGG
CCGGGGACGGCTTGCGCGGTTCTCTGGGGTTGGAAGGAGAGGGCGGCACAGAGATGGGTTGCAGGATGTGAAGAA
GAAGGGCATGACGACTGA
Gene >Hirsu2|7820
ATGGCGCGACTCTGGAGAGGGCGTCTCATCCGCGCCGTGGCCGCCTCGCCGTTCCTGCTCCTGTCCCTGCTATGC
CTGAGCCTCATGGACGCGGAAAAGATGGGCAAGCAATGGCAGCCGATGCTCGACGCGGGCCGGATAGAGTGGGAC
GGCGGCTCCGTCCCGATCCTGTCGGCGTTTTATCACAACAAGATACTGGACGACTTCTGGCGCGGACTGACCGTC
TTGTTCTCGCCGTCCACGCTGGGCTACGACCCCGTCGCCTGGTGGGTTGGCTTCGTTTTTGTCATTCATCTCGCG
CCGCTTTACGCCATCTGGATGCTGGAATCGCATCGCGCGGTCAGCACCAGCGGCCCGGCCAGGCTGTAAGTCTTG
TCTTTCACGTCCACATGCTTGCCGTTGCGAGTGCTCGGCTGGGTCTGGCCTGGGAGACTGGAGGCTCATGACGAG
TTCAGTCCGACAATCTTCACCAGCCTCGGCCAGGCTCTTGGCTCTGGCGTCGTCGCGCCCGTCTTCTACTTCCTG
TGCCTCGTCTTCGGCCGCCCGAGCTCGGATCTGGCCCGCCTCAAGTCGGAGGGGAAGTCGGCAAGGTCGTGGGAA
ATCCGTCCCGTCCCGTTCATGCTGCCTCTCGTTCTGCTGTTGCACATGGTCGGCGTCAGTGCCGCGTTTCTCGCC
CCGCGGTTCGAGACGCGACACTTCTGGACTTGGACCTGGCTGCTCTCGCCCATGGCCCTTGGGTTCGGCGACGCA
GTGCTGGCGCGCCTGTTCTACGCGCCGGCTCCTTGCTCTCTTGAAAGGCGAGGACGAGAAGGGCAGGGAAGGCAG
AAGCGCAGCGCGTTTGGGTCACCGGAGCTGCAACTCGGAGCTCTGGCCGTTCTGTCGGCTGGCACCTGGATTTAC
ATGCTCGCGCGCGCCCCCTTCTCCCTGTCCGACATCTTTGTGCCCGAGACGATTGCGGCACAGGACGACTTCATC
CTGCACTCGCGGGTCATCATGCAGCTCGACTGCCTCGTTACCTTCGGCGCCTCCCTGTTGTGGCTGCTGTACGTC
TGTTTCGATCTCGCCAGGGCTGGTGTTCTCACTGAGGCCGATGGACTCTCCCTCTTTGGTCTCTTGCCCGTCGTC
CTGGCCGCGGGAGGGCCGGGGACGGCTTGCGCGGTTCTCTGGGGTTGGAAGGAGAGGGCGGCACAGAGATGGGTT
GCAGGATGTGAAGAAGAAGGGCATGACGACTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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