Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7820
Gene name
LocationContig_478:4272..5505
Strand-
Gene length (bp)1233
Transcript length (bp)1143
Coding sequence length (bp)1143
Protein length (aa) 381

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Endoplasmic reticulum Signal peptide|Transmembrane domain 0.1477 0.2807 0.0541 0.0587 0.1971 0.0684 0.8006 0.3536 0.5275 0.0434

SignalP

SignalP signal predicted Location Score
Yes 1 - 31 0.998082

Transmembrane Domains

Domain # Start End Length
1 9 31 22
2 86 108 22
3 129 151 22
4 171 193 22
5 206 228 22
6 255 272 17
7 307 329 22
8 339 361 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup10478
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|7820 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7820
MARLWRGRLIRAVAASPFLLLSLLCLSLMDAEKMGKQWQPMLDAGRIEWDGGSVPILSAFYHNKILDDFWRGLTV
LFSPSTLGYDPVAWWVGFVFVIHLAPLYAIWMLESHRAVSTSGPARLPTIFTSLGQALGSGVVAPVFYFLCLVFG
RPSSDLARLKSEGKSARSWEIRPVPFMLPLVLLLHMVGVSAAFLAPRFETRHFWTWTWLLSPMALGFGDAVLARL
FYAPAPCSLERRGREGQGRQKRSAFGSPELQLGALAVLSAGTWIYMLARAPFSLSDIFVPETIAAQDDFILHSRV
IMQLDCLVTFGASLLWLLYVCFDLARAGVLTEADGLSLFGLLPVVLAAGGPGTACAVLWGWKERAAQRWVAGCEE
EGHDD*
Coding >Hirsu2|7820
ATGGCGCGACTCTGGAGAGGGCGTCTCATCCGCGCCGTGGCCGCCTCGCCGTTCCTGCTCCTGTCCCTGCTATGC
CTGAGCCTCATGGACGCGGAAAAGATGGGCAAGCAATGGCAGCCGATGCTCGACGCGGGCCGGATAGAGTGGGAC
GGCGGCTCCGTCCCGATCCTGTCGGCGTTTTATCACAACAAGATACTGGACGACTTCTGGCGCGGACTGACCGTC
TTGTTCTCGCCGTCCACGCTGGGCTACGACCCCGTCGCCTGGTGGGTTGGCTTCGTTTTTGTCATTCATCTCGCG
CCGCTTTACGCCATCTGGATGCTGGAATCGCATCGCGCGGTCAGCACCAGCGGCCCGGCCAGGCTTCCGACAATC
TTCACCAGCCTCGGCCAGGCTCTTGGCTCTGGCGTCGTCGCGCCCGTCTTCTACTTCCTGTGCCTCGTCTTCGGC
CGCCCGAGCTCGGATCTGGCCCGCCTCAAGTCGGAGGGGAAGTCGGCAAGGTCGTGGGAAATCCGTCCCGTCCCG
TTCATGCTGCCTCTCGTTCTGCTGTTGCACATGGTCGGCGTCAGTGCCGCGTTTCTCGCCCCGCGGTTCGAGACG
CGACACTTCTGGACTTGGACCTGGCTGCTCTCGCCCATGGCCCTTGGGTTCGGCGACGCAGTGCTGGCGCGCCTG
TTCTACGCGCCGGCTCCTTGCTCTCTTGAAAGGCGAGGACGAGAAGGGCAGGGAAGGCAGAAGCGCAGCGCGTTT
GGGTCACCGGAGCTGCAACTCGGAGCTCTGGCCGTTCTGTCGGCTGGCACCTGGATTTACATGCTCGCGCGCGCC
CCCTTCTCCCTGTCCGACATCTTTGTGCCCGAGACGATTGCGGCACAGGACGACTTCATCCTGCACTCGCGGGTC
ATCATGCAGCTCGACTGCCTCGTTACCTTCGGCGCCTCCCTGTTGTGGCTGCTGTACGTCTGTTTCGATCTCGCC
AGGGCTGGTGTTCTCACTGAGGCCGATGGACTCTCCCTCTTTGGTCTCTTGCCCGTCGTCCTGGCCGCGGGAGGG
CCGGGGACGGCTTGCGCGGTTCTCTGGGGTTGGAAGGAGAGGGCGGCACAGAGATGGGTTGCAGGATGTGAAGAA
GAAGGGCATGACGACTGA
Transcript >Hirsu2|7820
ATGGCGCGACTCTGGAGAGGGCGTCTCATCCGCGCCGTGGCCGCCTCGCCGTTCCTGCTCCTGTCCCTGCTATGC
CTGAGCCTCATGGACGCGGAAAAGATGGGCAAGCAATGGCAGCCGATGCTCGACGCGGGCCGGATAGAGTGGGAC
GGCGGCTCCGTCCCGATCCTGTCGGCGTTTTATCACAACAAGATACTGGACGACTTCTGGCGCGGACTGACCGTC
TTGTTCTCGCCGTCCACGCTGGGCTACGACCCCGTCGCCTGGTGGGTTGGCTTCGTTTTTGTCATTCATCTCGCG
CCGCTTTACGCCATCTGGATGCTGGAATCGCATCGCGCGGTCAGCACCAGCGGCCCGGCCAGGCTTCCGACAATC
TTCACCAGCCTCGGCCAGGCTCTTGGCTCTGGCGTCGTCGCGCCCGTCTTCTACTTCCTGTGCCTCGTCTTCGGC
CGCCCGAGCTCGGATCTGGCCCGCCTCAAGTCGGAGGGGAAGTCGGCAAGGTCGTGGGAAATCCGTCCCGTCCCG
TTCATGCTGCCTCTCGTTCTGCTGTTGCACATGGTCGGCGTCAGTGCCGCGTTTCTCGCCCCGCGGTTCGAGACG
CGACACTTCTGGACTTGGACCTGGCTGCTCTCGCCCATGGCCCTTGGGTTCGGCGACGCAGTGCTGGCGCGCCTG
TTCTACGCGCCGGCTCCTTGCTCTCTTGAAAGGCGAGGACGAGAAGGGCAGGGAAGGCAGAAGCGCAGCGCGTTT
GGGTCACCGGAGCTGCAACTCGGAGCTCTGGCCGTTCTGTCGGCTGGCACCTGGATTTACATGCTCGCGCGCGCC
CCCTTCTCCCTGTCCGACATCTTTGTGCCCGAGACGATTGCGGCACAGGACGACTTCATCCTGCACTCGCGGGTC
ATCATGCAGCTCGACTGCCTCGTTACCTTCGGCGCCTCCCTGTTGTGGCTGCTGTACGTCTGTTTCGATCTCGCC
AGGGCTGGTGTTCTCACTGAGGCCGATGGACTCTCCCTCTTTGGTCTCTTGCCCGTCGTCCTGGCCGCGGGAGGG
CCGGGGACGGCTTGCGCGGTTCTCTGGGGTTGGAAGGAGAGGGCGGCACAGAGATGGGTTGCAGGATGTGAAGAA
GAAGGGCATGACGACTGA
Gene >Hirsu2|7820
ATGGCGCGACTCTGGAGAGGGCGTCTCATCCGCGCCGTGGCCGCCTCGCCGTTCCTGCTCCTGTCCCTGCTATGC
CTGAGCCTCATGGACGCGGAAAAGATGGGCAAGCAATGGCAGCCGATGCTCGACGCGGGCCGGATAGAGTGGGAC
GGCGGCTCCGTCCCGATCCTGTCGGCGTTTTATCACAACAAGATACTGGACGACTTCTGGCGCGGACTGACCGTC
TTGTTCTCGCCGTCCACGCTGGGCTACGACCCCGTCGCCTGGTGGGTTGGCTTCGTTTTTGTCATTCATCTCGCG
CCGCTTTACGCCATCTGGATGCTGGAATCGCATCGCGCGGTCAGCACCAGCGGCCCGGCCAGGCTGTAAGTCTTG
TCTTTCACGTCCACATGCTTGCCGTTGCGAGTGCTCGGCTGGGTCTGGCCTGGGAGACTGGAGGCTCATGACGAG
TTCAGTCCGACAATCTTCACCAGCCTCGGCCAGGCTCTTGGCTCTGGCGTCGTCGCGCCCGTCTTCTACTTCCTG
TGCCTCGTCTTCGGCCGCCCGAGCTCGGATCTGGCCCGCCTCAAGTCGGAGGGGAAGTCGGCAAGGTCGTGGGAA
ATCCGTCCCGTCCCGTTCATGCTGCCTCTCGTTCTGCTGTTGCACATGGTCGGCGTCAGTGCCGCGTTTCTCGCC
CCGCGGTTCGAGACGCGACACTTCTGGACTTGGACCTGGCTGCTCTCGCCCATGGCCCTTGGGTTCGGCGACGCA
GTGCTGGCGCGCCTGTTCTACGCGCCGGCTCCTTGCTCTCTTGAAAGGCGAGGACGAGAAGGGCAGGGAAGGCAG
AAGCGCAGCGCGTTTGGGTCACCGGAGCTGCAACTCGGAGCTCTGGCCGTTCTGTCGGCTGGCACCTGGATTTAC
ATGCTCGCGCGCGCCCCCTTCTCCCTGTCCGACATCTTTGTGCCCGAGACGATTGCGGCACAGGACGACTTCATC
CTGCACTCGCGGGTCATCATGCAGCTCGACTGCCTCGTTACCTTCGGCGCCTCCCTGTTGTGGCTGCTGTACGTC
TGTTTCGATCTCGCCAGGGCTGGTGTTCTCACTGAGGCCGATGGACTCTCCCTCTTTGGTCTCTTGCCCGTCGTC
CTGGCCGCGGGAGGGCCGGGGACGGCTTGCGCGGTTCTCTGGGGTTGGAAGGAGAGGGCGGCACAGAGATGGGTT
GCAGGATGTGAAGAAGAAGGGCATGACGACTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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