Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7790
Gene name
LocationContig_473:2530..3310
Strand-
Gene length (bp)780
Transcript length (bp)723
Coding sequence length (bp)723
Protein length (aa) 241

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13881 Rad60-SLD_2 Ubiquitin-2 like Rad60 SUMO-like 6.3E-12 143 216

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7790
MSSGNNVSSGSAPRLELPIDAVPMESMPHSSGPPRDATTASRDAHDALASADASAAAKGKEPQEAAPAPPSKQRR
DSFAAIGPAQDDIRAAAPAASDAGPVCNITLLLTSGSRHPYKIDARYLSRRNVAIPDETDAGHPDPFSISVYTLK
ELILREWRTDWEAKPASPSSIRLIHFGKLLEDKEPLKKYQFSTENPNVVHMSIRPSDLDEEEPKTGSKSLPAGAG
DGQRSRAGNSCCVIL*
Coding >Hirsu2|7790
ATGAGCAGTGGCAACAACGTTTCGTCGGGCTCCGCACCCCGTCTCGAGCTTCCCATCGACGCCGTTCCCATGGAA
AGCATGCCTCATTCCTCGGGGCCGCCGAGAGACGCGACGACAGCCTCGCGCGATGCCCATGACGCCCTCGCCTCG
GCCGACGCCTCTGCTGCCGCCAAGGGCAAGGAGCCCCAAGAGGCCGCCCCGGCGCCGCCTTCCAAGCAGAGGCGC
GACTCCTTCGCCGCCATCGGTCCCGCCCAAGACGACATCAGGGCCGCCGCCCCGGCCGCCTCCGACGCCGGGCCC
GTCTGCAACATCACCCTCCTCCTGACGTCCGGTAGCCGTCACCCGTACAAGATCGACGCCAGATATCTGTCCCGG
AGGAACGTGGCCATACCCGACGAGACCGACGCCGGCCACCCGGACCCCTTCAGCATCAGCGTCTACACCCTCAAG
GAGCTCATCCTGCGCGAGTGGCGCACCGACTGGGAGGCCAAGCCCGCCAGCCCCAGCAGCATACGCCTCATCCAT
TTCGGCAAGCTGCTGGAGGACAAGGAGCCGTTGAAGAAGTATCAGTTCAGCACCGAGAACCCAAACGTCGTCCAC
ATGAGCATCCGCCCTTCGGACCTGGACGAGGAGGAGCCCAAGACCGGGAGCAAGAGCCTTCCGGCCGGCGCCGGC
GACGGCCAGCGCTCCCGCGCCGGCAACAGCTGTTGCGTCATTTTATGA
Transcript >Hirsu2|7790
ATGAGCAGTGGCAACAACGTTTCGTCGGGCTCCGCACCCCGTCTCGAGCTTCCCATCGACGCCGTTCCCATGGAA
AGCATGCCTCATTCCTCGGGGCCGCCGAGAGACGCGACGACAGCCTCGCGCGATGCCCATGACGCCCTCGCCTCG
GCCGACGCCTCTGCTGCCGCCAAGGGCAAGGAGCCCCAAGAGGCCGCCCCGGCGCCGCCTTCCAAGCAGAGGCGC
GACTCCTTCGCCGCCATCGGTCCCGCCCAAGACGACATCAGGGCCGCCGCCCCGGCCGCCTCCGACGCCGGGCCC
GTCTGCAACATCACCCTCCTCCTGACGTCCGGTAGCCGTCACCCGTACAAGATCGACGCCAGATATCTGTCCCGG
AGGAACGTGGCCATACCCGACGAGACCGACGCCGGCCACCCGGACCCCTTCAGCATCAGCGTCTACACCCTCAAG
GAGCTCATCCTGCGCGAGTGGCGCACCGACTGGGAGGCCAAGCCCGCCAGCCCCAGCAGCATACGCCTCATCCAT
TTCGGCAAGCTGCTGGAGGACAAGGAGCCGTTGAAGAAGTATCAGTTCAGCACCGAGAACCCAAACGTCGTCCAC
ATGAGCATCCGCCCTTCGGACCTGGACGAGGAGGAGCCCAAGACCGGGAGCAAGAGCCTTCCGGCCGGCGCCGGC
GACGGCCAGCGCTCCCGCGCCGGCAACAGCTGTTGCGTCATTTTATGA
Gene >Hirsu2|7790
ATGAGCAGTGGCAACAACGTTTCGTCGGGCTCCGCACCCCGTCTCGAGCTTCCCATCGACGCCGTTCCCATGGAA
AGCATGCCTCATTCCTCGGGGCCGCCGAGAGACGCGACGACAGCCTCGCGCGATGCCCATGACGCCCTCGCCTCG
GCCGACGCCTCTGCTGCCGCCAAGGGCAAGGAGCCCCAAGAGGCCGCCCCGGCGCCGCCTTCCAAGCAGAGGCGC
GACTCCTTCGCCGCCATCGGTCCCGCCCAAGACGACATCAGGGCCGCCGCCCCGGCCGCCTCCGACGCCGGGCCC
GTCTGCAACATCACCCTCCTCCTGACGTCCGGTAGCCGTCACCCGTACAAGATCGACGCCAGATATCTGTCCCGG
AGGAACGTGGCCATACCCGACGAGACCGACGCCGGCCACCCGGACCCCTTCAGCATCAGCGTCTACACCCTCAAG
GAGCTCATCCTGCGCGAGTGGCGCACCGACTGGGAGGCCAAGCCCGCCAGCCCCAGCAGCATACGCCTCATCCAT
TTCGGCAAGCTGCTGGAGGACAAGGAGCCGTTGAAGAGTAAGCTGCCGCCCGCCTTCTGCCTCGAGCACCAGACT
GACCCCGCCCGACCCGCAGAGTATCAGTTCAGCACCGAGAACCCAAACGTCGTCCACATGAGCATCCGCCCTTCG
GACCTGGACGAGGAGGAGCCCAAGACCGGGAGCAAGAGCCTTCCGGCCGGCGCCGGCGACGGCCAGCGCTCCCGC
GCCGGCAACAGCTGTTGCGTCATTTTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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