© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|7765 |
| Gene name | |
| Location | Contig_470:5716..7163 |
| Strand | - |
| Gene length (bp) | 1447 |
| Transcript length (bp) | 1377 |
| Coding sequence length (bp) | 1377 |
| Protein length (aa) | 459 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF10332 | DUF2418 | Protein of unknown function (DUF2418) | 5.6E-35 | 161 | 265 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P87236|MU154_SCHPO | Meiotically up-regulated gene 154 protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug154 PE=1 SV=1 | 1 | 342 | 1.0E-18 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 21 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 79 | 101 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|7765 MPRLVRRRPLWERIVSMLNPMDFLLWLSEEIETRDWDSQLVGTQLGLGLNFVFLLARANSGSATTGEDIFGDGGS AGWLSLIVYPLVWALVAFSLTNAVYAVCRTRRYRLFEASIETKPSTPSARRVRVQSSPVSSSPLRFIADMMTPES AESRAHPDTNKDVWELAVWDPLPVSIRISCFFSPGHVLVYLLSLPLAPLDPRPSMTVLNTLVVQLVLSAQLLLLC ARYSQQAKDTSIIQKEVMHEYNTKFVQPRLFPQVRDVGTQVSADEPTEPLGSVQVGTPTTLVRRAFKTHGNPYID SPESTPVSGSTGFLKPPMLTPPAASRRIESLAPSTSQRGGSALRNSLPASRSPAAGTPPPFSGGNPNFGGNMGVY THNKSPLKKATSLGDFNQADAPPPRNSREMAAFEQRGLEPPSSPTKQTDRRKTLAASTQAAAPRPFTGVARPRPQ YERYPSRW* |
| Coding | >Hirsu2|7765 ATGCCCCGACTCGTGCGCCGCCGGCCGCTCTGGGAGCGCATCGTGTCGATGCTGAACCCTATGGACTTTCTGCTC TGGCTGTCGGAGGAGATCGAGACGAGGGACTGGGACTCGCAGCTGGTCGGCACGCAGCTCGGGCTGGGCCTCAAC TTCGTCTTCCTGCTGGCGCGGGCCAACTCGGGGTCGGCGACAACTGGCGAGGACATATTTGGCGATGGCGGCAGC GCCGGCTGGCTGTCTCTGATTGTCTACCCCTTGGTCTGGGCTCTGGTCGCATTCTCCCTGACCAACGCCGTCTAC GCCGTCTGTCGGACGAGGAGATACCGCTTGTTTGAGGCGAGCATCGAGACGAAGCCCTCGACGCCCTCGGCGCGC CGGGTCCGCGTCCAGTCGTCGCCCGTATCGTCGTCGCCGCTGCGCTTCATTGCCGACATGATGACGCCCGAGTCG GCCGAGTCGCGAGCGCACCCGGATACGAACAAGGACGTTTGGGAGCTGGCGGTTTGGGACCCGCTCCCGGTGTCT ATTCGCATCTCTTGCTTCTTCAGCCCGGGCCACGTCCTCGTCTATCTGCTCTCGCTGCCGCTCGCGCCTCTCGAT CCCCGGCCCAGCATGACGGTGCTCAACACGTTGGTCGTGCAGCTCGTCCTCTCGGCGCAGTTGCTGCTGCTCTGC GCGCGCTACTCCCAGCAGGCCAAGGACACGTCGATTATCCAGAAAGAGGTGATGCACGAATACAACACCAAGTTC GTCCAGCCCCGGCTGTTCCCGCAAGTCAGGGATGTGGGGACCCAAGTGAGCGCGGACGAGCCGACCGAGCCTCTC GGATCGGTACAGGTCGGCACCCCGACGACGCTGGTCAGGCGCGCCTTCAAGACGCACGGGAACCCGTACATCGAC TCCCCCGAGTCCACCCCGGTCAGCGGCAGCACCGGCTTCCTGAAGCCGCCGATGCTCACGCCTCCCGCCGCAAGC CGTCGGATAGAGTCGCTGGCACCGTCCACCAGCCAGCGCGGCGGCTCGGCTCTCCGCAACAGCCTGCCCGCGAGC CGTAGCCCAGCGGCCGGCACGCCCCCGCCCTTCTCGGGAGGCAACCCGAACTTTGGGGGGAACATGGGCGTCTAC ACCCACAACAAGTCGCCGCTCAAGAAGGCGACCAGCCTCGGCGATTTCAACCAGGCCGACGCGCCGCCGCCGAGA AACTCGAGAGAAATGGCTGCCTTTGAGCAGCGGGGCCTCGAGCCCCCGAGCAGCCCGACGAAGCAGACAGACCGT AGGAAGACTCTGGCTGCAAGCACGCAGGCTGCCGCCCCTCGTCCATTCACGGGCGTGGCCAGACCCAGGCCGCAG TATGAGAGATACCCGTCGCGATGGTAG |
| Transcript | >Hirsu2|7765 ATGCCCCGACTCGTGCGCCGCCGGCCGCTCTGGGAGCGCATCGTGTCGATGCTGAACCCTATGGACTTTCTGCTC TGGCTGTCGGAGGAGATCGAGACGAGGGACTGGGACTCGCAGCTGGTCGGCACGCAGCTCGGGCTGGGCCTCAAC TTCGTCTTCCTGCTGGCGCGGGCCAACTCGGGGTCGGCGACAACTGGCGAGGACATATTTGGCGATGGCGGCAGC GCCGGCTGGCTGTCTCTGATTGTCTACCCCTTGGTCTGGGCTCTGGTCGCATTCTCCCTGACCAACGCCGTCTAC GCCGTCTGTCGGACGAGGAGATACCGCTTGTTTGAGGCGAGCATCGAGACGAAGCCCTCGACGCCCTCGGCGCGC CGGGTCCGCGTCCAGTCGTCGCCCGTATCGTCGTCGCCGCTGCGCTTCATTGCCGACATGATGACGCCCGAGTCG GCCGAGTCGCGAGCGCACCCGGATACGAACAAGGACGTTTGGGAGCTGGCGGTTTGGGACCCGCTCCCGGTGTCT ATTCGCATCTCTTGCTTCTTCAGCCCGGGCCACGTCCTCGTCTATCTGCTCTCGCTGCCGCTCGCGCCTCTCGAT CCCCGGCCCAGCATGACGGTGCTCAACACGTTGGTCGTGCAGCTCGTCCTCTCGGCGCAGTTGCTGCTGCTCTGC GCGCGCTACTCCCAGCAGGCCAAGGACACGTCGATTATCCAGAAAGAGGTGATGCACGAATACAACACCAAGTTC GTCCAGCCCCGGCTGTTCCCGCAAGTCAGGGATGTGGGGACCCAAGTGAGCGCGGACGAGCCGACCGAGCCTCTC GGATCGGTACAGGTCGGCACCCCGACGACGCTGGTCAGGCGCGCCTTCAAGACGCACGGGAACCCGTACATCGAC TCCCCCGAGTCCACCCCGGTCAGCGGCAGCACCGGCTTCCTGAAGCCGCCGATGCTCACGCCTCCCGCCGCAAGC CGTCGGATAGAGTCGCTGGCACCGTCCACCAGCCAGCGCGGCGGCTCGGCTCTCCGCAACAGCCTGCCCGCGAGC CGTAGCCCAGCGGCCGGCACGCCCCCGCCCTTCTCGGGAGGCAACCCGAACTTTGGGGGGAACATGGGCGTCTAC ACCCACAACAAGTCGCCGCTCAAGAAGGCGACCAGCCTCGGCGATTTCAACCAGGCCGACGCGCCGCCGCCGAGA AACTCGAGAGAAATGGCTGCCTTTGAGCAGCGGGGCCTCGAGCCCCCGAGCAGCCCGACGAAGCAGACAGACCGT AGGAAGACTCTGGCTGCAAGCACGCAGGCTGCCGCCCCTCGTCCATTCACGGGCGTGGCCAGACCCAGGCCGCAG TATGAGAGATACCCGTCGCGATGGTAG |
| Gene | >Hirsu2|7765 ATGCCCCGACTCGTGCGCCGCCGGCCGCTCTGGGAGCGCATCGTGTCGATGCTGAACCCTATGGACTTTCTGCTC TGGCTGTCGGAGGAGATCGAGACGAGGGACTGGGACTCGCAGCTGGTCGGCACGCAGCTCGGGCTGGGCCTCAAC TTCGTCTTCCTGCTGGCGCGGGCCAACTCGGGGTCGGCGACAACTGGCGAGGACATATTTGGCGATGGCGGCAGC GCCGGCTGGCTGTCTCTGATTGTGAGCTGATGCAGGCCTCTCTCCCTTGCCCTCTGCCGCGACTCGGTGGCTGAC CGCCCTTCTTCCGCAGGTCTACCCCTTGGTCTGGGCTCTGGTCGCATTCTCCCTGACCAACGCCGTCTACGCCGT CTGTCGGACGAGGAGATACCGCTTGTTTGAGGCGAGCATCGAGACGAAGCCCTCGACGCCCTCGGCGCGCCGGGT CCGCGTCCAGTCGTCGCCCGTATCGTCGTCGCCGCTGCGCTTCATTGCCGACATGATGACGCCCGAGTCGGCCGA GTCGCGAGCGCACCCGGATACGAACAAGGACGTTTGGGAGCTGGCGGTTTGGGACCCGCTCCCGGTGTCTATTCG CATCTCTTGCTTCTTCAGCCCGGGCCACGTCCTCGTCTATCTGCTCTCGCTGCCGCTCGCGCCTCTCGATCCCCG GCCCAGCATGACGGTGCTCAACACGTTGGTCGTGCAGCTCGTCCTCTCGGCGCAGTTGCTGCTGCTCTGCGCGCG CTACTCCCAGCAGGCCAAGGACACGTCGATTATCCAGAAAGAGGTGATGCACGAATACAACACCAAGTTCGTCCA GCCCCGGCTGTTCCCGCAAGTCAGGGATGTGGGGACCCAAGTGAGCGCGGACGAGCCGACCGAGCCTCTCGGATC GGTACAGGTCGGCACCCCGACGACGCTGGTCAGGCGCGCCTTCAAGACGCACGGGAACCCGTACATCGACTCCCC CGAGTCCACCCCGGTCAGCGGCAGCACCGGCTTCCTGAAGCCGCCGATGCTCACGCCTCCCGCCGCAAGCCGTCG GATAGAGTCGCTGGCACCGTCCACCAGCCAGCGCGGCGGCTCGGCTCTCCGCAACAGCCTGCCCGCGAGCCGTAG CCCAGCGGCCGGCACGCCCCCGCCCTTCTCGGGAGGCAACCCGAACTTTGGGGGGAACATGGGCGTCTACACCCA CAACAAGTCGCCGCTCAAGAAGGCGACCAGCCTCGGCGATTTCAACCAGGCCGACGCGCCGCCGCCGAGAAACTC GAGAGAAATGGCTGCCTTTGAGCAGCGGGGCCTCGAGCCCCCGAGCAGCCCGACGAAGCAGACAGACCGTAGGAA GACTCTGGCTGCAAGCACGCAGGCTGCCGCCCCTCGTCCATTCACGGGCGTGGCCAGACCCAGGCCGCAGTATGA GAGATACCCGTCGCGATGGTAG |