Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7735
Gene name
LocationContig_469:2570..3101
Strand+
Gene length (bp)531
Transcript length (bp)531
Coding sequence length (bp)531
Protein length (aa) 177

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.5099 0.4572 0.2635 0.0564 0.242 0.0568 0.0686 0.1524 0.1609 0.0788

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5983
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|10285
Ophiocordyceps subramaniannii Hirsu2|297
Ophiocordyceps subramaniannii Hirsu2|6349
Ophiocordyceps subramaniannii Hirsu2|7735 (this protein)
Ophiocordyceps subramaniannii Hirsu2|8431

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7735
MEPALPRKFGFLRFFQFLESVKSKIGDDKAQGLILREKSVVNSPRAYSIYIGAEVVATEQNDLRRNRQTGWRFHQ
FSIESPLLLTVFTKTADTFAYVLTPSNLSAFKKLTSSRDPKKADESTFAVLAPRVREDIPKELRDVCQFLTTRVE
EAIVSGASYSQYLGQGMADQIRRHLV*
Coding >Hirsu2|7735
ATGGAACCAGCACTCCCACGAAAATTTGGCTTTTTACGATTTTTCCAATTCCTGGAGTCTGTGAAGTCCAAGATT
GGCGATGACAAGGCCCAGGGATTAATTCTCCGTGAAAAGAGTGTCGTTAATAGTCCTCGTGCCTATAGCATCTAC
ATCGGTGCCGAGGTTGTGGCTACCGAGCAAAACGATCTCCGACGCAACAGGCAAACGGGCTGGCGCTTCCACCAA
TTTTCAATTGAATCTCCTCTTCTCTTGACCGTCTTCACTAAAACAGCGGACACGTTCGCGTACGTACTTACCCCC
TCAAATCTTTCAGCTTTCAAAAAGCTCACCAGTTCCAGGGACCCAAAGAAGGCGGACGAGTCTACTTTCGCTGTG
TTGGCCCCCCGAGTTCGTGAGGACATACCTAAGGAGCTCCGAGACGTCTGTCAATTTTTAACCACGAGGGTGGAG
GAAGCGATAGTCTCGGGAGCCTCTTATAGCCAATACCTGGGGCAGGGCATGGCGGATCAGATTAGACGGCACTTG
GTCTAG
Transcript >Hirsu2|7735
ATGGAACCAGCACTCCCACGAAAATTTGGCTTTTTACGATTTTTCCAATTCCTGGAGTCTGTGAAGTCCAAGATT
GGCGATGACAAGGCCCAGGGATTAATTCTCCGTGAAAAGAGTGTCGTTAATAGTCCTCGTGCCTATAGCATCTAC
ATCGGTGCCGAGGTTGTGGCTACCGAGCAAAACGATCTCCGACGCAACAGGCAAACGGGCTGGCGCTTCCACCAA
TTTTCAATTGAATCTCCTCTTCTCTTGACCGTCTTCACTAAAACAGCGGACACGTTCGCGTACGTACTTACCCCC
TCAAATCTTTCAGCTTTCAAAAAGCTCACCAGTTCCAGGGACCCAAAGAAGGCGGACGAGTCTACTTTCGCTGTG
TTGGCCCCCCGAGTTCGTGAGGACATACCTAAGGAGCTCCGAGACGTCTGTCAATTTTTAACCACGAGGGTGGAG
GAAGCGATAGTCTCGGGAGCCTCTTATAGCCAATACCTGGGGCAGGGCATGGCGGATCAGATTAGACGGCACTTG
GTCTAG
Gene >Hirsu2|7735
ATGGAACCAGCACTCCCACGAAAATTTGGCTTTTTACGATTTTTCCAATTCCTGGAGTCTGTGAAGTCCAAGATT
GGCGATGACAAGGCCCAGGGATTAATTCTCCGTGAAAAGAGTGTCGTTAATAGTCCTCGTGCCTATAGCATCTAC
ATCGGTGCCGAGGTTGTGGCTACCGAGCAAAACGATCTCCGACGCAACAGGCAAACGGGCTGGCGCTTCCACCAA
TTTTCAATTGAATCTCCTCTTCTCTTGACCGTCTTCACTAAAACAGCGGACACGTTCGCGTACGTACTTACCCCC
TCAAATCTTTCAGCTTTCAAAAAGCTCACCAGTTCCAGGGACCCAAAGAAGGCGGACGAGTCTACTTTCGCTGTG
TTGGCCCCCCGAGTTCGTGAGGACATACCTAAGGAGCTCCGAGACGTCTGTCAATTTTTAACCACGAGGGTGGAG
GAAGCGATAGTCTCGGGAGCCTCTTATAGCCAATACCTGGGGCAGGGCATGGCGGATCAGATTAGACGGCACTTG
GTCTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail