Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7730
Gene name
LocationContig_467:8108..10031
Strand-
Gene length (bp)1923
Transcript length (bp)1560
Coding sequence length (bp)1560
Protein length (aa) 520

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05637 Glyco_transf_34 galactosyl transferase GMA12/MNN10 family 7.3E-63 216 479

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P50108|MNN10_YEAST Probable alpha-1,6-mannosyltransferase MNN10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MNN10 PE=1 SV=1 149 500 8.0E-108
sp|P78817|YFE6_SCHPO Uncharacterized alpha-1,2-galactosyltransferase C637.06 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC637.06 PE=2 SV=2 183 486 1.0E-87
sp|O94622|YBKD_SCHPO Uncharacterized alpha-1,2-galactosyltransferase C1289.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1289.13c PE=3 SV=1 243 478 3.0E-24
sp|Q09174|GMA12_SCHPO Alpha-1,2-galactosyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gma12 PE=1 SV=1 246 488 7.0E-24
sp|Q10359|GMH3_SCHPO Alpha-1,2-galactosyltransferase gmh3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gmh3 PE=3 SV=1 245 487 3.0E-19
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Swissprot ID Swissprot Description Start End E-value
sp|P50108|MNN10_YEAST Probable alpha-1,6-mannosyltransferase MNN10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MNN10 PE=1 SV=1 149 500 8.0E-108
sp|P78817|YFE6_SCHPO Uncharacterized alpha-1,2-galactosyltransferase C637.06 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC637.06 PE=2 SV=2 183 486 1.0E-87
sp|O94622|YBKD_SCHPO Uncharacterized alpha-1,2-galactosyltransferase C1289.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1289.13c PE=3 SV=1 243 478 3.0E-24
sp|Q09174|GMA12_SCHPO Alpha-1,2-galactosyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gma12 PE=1 SV=1 246 488 7.0E-24
sp|Q10359|GMH3_SCHPO Alpha-1,2-galactosyltransferase gmh3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gmh3 PE=3 SV=1 245 487 3.0E-19
sp|Q09681|GMH2_SCHPO Probable alpha-1,2-galactosyltransferase gmh2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gmh2 PE=3 SV=1 243 483 5.0E-18
sp|O13640|YGWH_SCHPO Uncharacterized alpha-1,2-galactosyltransferase C8D2.17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pi048 PE=3 SV=2 278 478 3.0E-11
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GO

GO Term Description Terminal node
GO:0016757 transferase activity, transferring glycosyl groups Yes
GO:0016021 integral component of membrane Yes
GO:0005575 cellular_component No
GO:0031224 intrinsic component of membrane No
GO:0016740 transferase activity No
GO:0003674 molecular_function No
GO:0044425 membrane part No
GO:0003824 catalytic activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 15 0.45

Transmembrane Domains

Domain # Start End Length
1 184 206 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7730
LASPKAPTGSSSSFGDRPALSHHRRRSSAGSQTVVKVRPADLLQVQTSRTSLSPIIGTPADPMSLSRSPSPVPGG
GWSSPGLNMNSGRNSPSNGGPAPVSWESSRARHVGANGYPTFSTHNQGFFTRHMRRISSGLPRFNSGSDARRSDK
DKLGHGPRPGQNIPLVWRVRSVLGRMGRKLKMRLLVGLAVFLCIYIFYHSPLVYHWRRSSWGGGGEKFVIILAAN
VGGGVMEWKGAREWAIERDSVRNKRKYVTRWGYDLEIVDMSTKKKYAHEWRESWEKVDSMRSAMRKYPRAEWFWW
LDLNTYIMEPSYSLQGHLFDDLGTHVYRDINEFNPLNMTHPFSEPYLDADSLSPVGDGDANSVNLVLSQDCAGFN
LGSFFLRRSAWTERLLDIWWDPVAYEQKHMEWDHKEQDALEQLYESQPWVRKHTGFLPQRKINSFPPAACGDGSG
KNHTRYHYNEHERDFVVNMAGCEWGRDCWGEMYHYREFSYWLNRNPWERFKEDLVAVLWFKLTGQRVKL*
Coding >Hirsu2|7730
CTGGCGTCCCCAAAGGCCCCGACCGGCTCTTCGAGCTCCTTCGGCGACCGGCCTGCGCTTTCGCACCATCGGAGG
CGCTCGTCGGCCGGCTCGCAGACTGTCGTCAAGGTGCGACCTGCCGACTTGCTCCAAGTGCAGACATCTCGCACT
TCGCTATCACCCATAATCGGCACGCCTGCCGATCCCATGTCCCTGTCCCGCAGCCCGTCTCCAGTCCCCGGCGGC
GGCTGGTCTAGTCCCGGCCTCAACATGAACAGCGGGAGGAACAGCCCGTCCAACGGCGGCCCTGCTCCGGTGTCT
TGGGAGTCGTCGAGGGCGCGCCACGTCGGCGCCAATGGCTACCCGACCTTCTCAACCCACAACCAAGGCTTCTTC
ACCCGCCACATGCGGCGCATATCGAGCGGCCTGCCGCGATTCAACTCCGGCTCGGACGCCCGTCGCTCCGACAAA
GACAAGCTGGGCCACGGCCCACGGCCCGGACAAAACATACCGCTGGTCTGGAGGGTGCGCTCCGTGCTCGGGCGC
ATGGGGCGCAAACTGAAAATGAGGCTTCTCGTCGGCTTGGCTGTTTTTCTCTGCATATACATCTTCTACCACTCT
CCCCTAGTATACCACTGGCGGAGATCATCGTGGGGCGGCGGCGGCGAGAAATTCGTCATCATCCTGGCCGCCAAC
GTCGGCGGAGGCGTCATGGAGTGGAAGGGGGCCCGCGAATGGGCCATCGAGCGCGACAGCGTGCGGAACAAACGA
AAATACGTGACGAGATGGGGCTACGACCTGGAGATTGTCGACATGAGCACCAAGAAGAAGTACGCGCACGAATGG
CGGGAGAGCTGGGAAAAGGTCGACTCGATGCGCAGCGCCATGAGGAAGTACCCGAGGGCCGAATGGTTCTGGTGG
CTCGACCTCAACACGTACATCATGGAGCCGTCGTACTCGCTGCAGGGGCACCTGTTCGACGATCTCGGGACGCAC
GTGTACCGCGACATCAACGAGTTCAACCCGCTCAACATGACGCACCCGTTCAGCGAGCCGTACCTGGACGCCGAC
TCGCTGAGCCCGGTGGGCGACGGCGACGCCAACTCGGTGAACTTGGTGCTGTCGCAGGACTGCGCCGGCTTCAAC
CTGGGCTCCTTCTTCCTGCGGCGCAGCGCGTGGACGGAGCGGCTGCTGGACATCTGGTGGGACCCGGTGGCGTAC
GAGCAGAAGCACATGGAGTGGGACCACAAGGAGCAGGACGCACTGGAGCAGCTGTACGAGAGCCAGCCGTGGGTG
AGGAAGCACACGGGCTTCCTGCCGCAGCGCAAGATCAACAGCTTCCCGCCGGCGGCGTGCGGGGACGGCAGCGGC
AAGAACCACACGCGCTACCACTACAACGAGCACGAGCGAGACTTTGTCGTCAACATGGCCGGCTGCGAATGGGGC
CGCGACTGCTGGGGCGAGATGTACCACTACCGCGAGTTCAGCTACTGGCTCAACCGCAACCCGTGGGAGCGCTTC
AAGGAAGACTTGGTGGCCGTGCTGTGGTTCAAGCTCACGGGCCAGCGGGTCAAGTTGTAA
Transcript >Hirsu2|7730
CTGGCGTCCCCAAAGGCCCCGACCGGCTCTTCGAGCTCCTTCGGCGACCGGCCTGCGCTTTCGCACCATCGGAGG
CGCTCGTCGGCCGGCTCGCAGACTGTCGTCAAGGTGCGACCTGCCGACTTGCTCCAAGTGCAGACATCTCGCACT
TCGCTATCACCCATAATCGGCACGCCTGCCGATCCCATGTCCCTGTCCCGCAGCCCGTCTCCAGTCCCCGGCGGC
GGCTGGTCTAGTCCCGGCCTCAACATGAACAGCGGGAGGAACAGCCCGTCCAACGGCGGCCCTGCTCCGGTGTCT
TGGGAGTCGTCGAGGGCGCGCCACGTCGGCGCCAATGGCTACCCGACCTTCTCAACCCACAACCAAGGCTTCTTC
ACCCGCCACATGCGGCGCATATCGAGCGGCCTGCCGCGATTCAACTCCGGCTCGGACGCCCGTCGCTCCGACAAA
GACAAGCTGGGCCACGGCCCACGGCCCGGACAAAACATACCGCTGGTCTGGAGGGTGCGCTCCGTGCTCGGGCGC
ATGGGGCGCAAACTGAAAATGAGGCTTCTCGTCGGCTTGGCTGTTTTTCTCTGCATATACATCTTCTACCACTCT
CCCCTAGTATACCACTGGCGGAGATCATCGTGGGGCGGCGGCGGCGAGAAATTCGTCATCATCCTGGCCGCCAAC
GTCGGCGGAGGCGTCATGGAGTGGAAGGGGGCCCGCGAATGGGCCATCGAGCGCGACAGCGTGCGGAACAAACGA
AAATACGTGACGAGATGGGGCTACGACCTGGAGATTGTCGACATGAGCACCAAGAAGAAGTACGCGCACGAATGG
CGGGAGAGCTGGGAAAAGGTCGACTCGATGCGCAGCGCCATGAGGAAGTACCCGAGGGCCGAATGGTTCTGGTGG
CTCGACCTCAACACGTACATCATGGAGCCGTCGTACTCGCTGCAGGGGCACCTGTTCGACGATCTCGGGACGCAC
GTGTACCGCGACATCAACGAGTTCAACCCGCTCAACATGACGCACCCGTTCAGCGAGCCGTACCTGGACGCCGAC
TCGCTGAGCCCGGTGGGCGACGGCGACGCCAACTCGGTGAACTTGGTGCTGTCGCAGGACTGCGCCGGCTTCAAC
CTGGGCTCCTTCTTCCTGCGGCGCAGCGCGTGGACGGAGCGGCTGCTGGACATCTGGTGGGACCCGGTGGCGTAC
GAGCAGAAGCACATGGAGTGGGACCACAAGGAGCAGGACGCACTGGAGCAGCTGTACGAGAGCCAGCCGTGGGTG
AGGAAGCACACGGGCTTCCTGCCGCAGCGCAAGATCAACAGCTTCCCGCCGGCGGCGTGCGGGGACGGCAGCGGC
AAGAACCACACGCGCTACCACTACAACGAGCACGAGCGAGACTTTGTCGTCAACATGGCCGGCTGCGAATGGGGC
CGCGACTGCTGGGGCGAGATGTACCACTACCGCGAGTTCAGCTACTGGCTCAACCGCAACCCGTGGGAGCGCTTC
AAGGAAGACTTGGTGGCCGTGCTGTGGTTCAAGCTCACGGGCCAGCGGGTCAAGTTGTAA
Gene >Hirsu2|7730
CTGGCGTCCCCAAAGGCCCCGACCGGCTCTTCGAGCTCCTTCGGCGACCGGCCTGCGCTTTCGCACCATCGGAGG
CGCTCGTCGGCCGGCTCGCAGACTGTCGTCAAGGTGCGACCTGCCGACTTGCTCCAAGTGCAGACATCTCGCACT
TCGCTATCACCCATAATCGGTGCGTCTCTTCTCCCCTGGCCCGCCCGTCCTCTCCTCTCCCCTCTCCCCTCTCTC
TCCTCTTCCCCTCTCGTCCTCTCTCCTTTTCCTATTTCCCTTTCACCTTCTCCACTCTTCCTTCTCTCCCCTTCT
GTCGTCCTCTCATACCCCCCGCGTCTCACAGCGAGCGCCGCTGGCCTTGGCTGACACGAGTTTACTGTCGCCCCA
GGCACGCCTGCCGATCCCATGTCCCTGTCCCGCAGCCCGTCTCCAGTCCCCGGCGGCGGCTGGTCTAGTCCCGGC
CTCAACATGAACAGCGGGAGGAACAGCCCGTCCAACGGCGGCCCTGCTCCGGTGTCTTGGGAGTCGTCGAGGGCG
CGCCACGTCGGCGCCAATGGCTACCCGACCTTCTCAACCCACAACCAAGGCTTCTTCACCCGCCACATGCGGCGC
ATATCGAGCGGCCTGCCGCGATTCAACTCCGGCTCGGACGCCCGTCGCTCCGACAAAGACAAGCTGGGCCACGGC
CCACGGCCCGGACAAAACATACCGCTGGTCTGGAGGGTGCGCTCCGTGCTCGGGCGCATGGGGCGCAAACTGAAA
ATGAGGCTTCTCGTCGGCTTGGCTGTTTTTCTCTGCATATACATCTTCTACCACTCTCGTACGTGGCCTCCCCTC
GCTTCCCCTCGGCCTCTTGGTCGGCTCGACTGCGTCGCACGTTGCCTGGCCGCGAGTACTGACGAATGGCCATGG
AGCAGCCCTAGTATACCACTGGCGGAGATCATCGTGGGGCGGCGGCGGCGAGAAATTCGTCATCATCCTGGCCGC
CAACGTCGGCGGAGGCGTCATGGAGTGGAAGGGGGCCCGCGAATGGGCCATCGAGCGCGACAGCGTGCGGAACAA
ACGAAAATACGTGACGAGATGGGGCTACGACCTGGAGATTGTCGACATGAGCACCAAGAAGAAGTACGCGCACGA
ATGGCGGGAGAGCTGGGAAAAGGTCGACTCGATGCGCAGCGCCATGAGGAAGTACCCGAGGGCCGAATGGTAAGG
CAGATATCTGTGTACATGCCGTCCCGAGCCGTGCCGCTGACGGATTCTCGCAGGTTCTGGTGGCTCGACCTCAAC
ACGTACATCATGGAGCCGTCGTACTCGCTGCAGGGGCACCTGTTCGACGATCTCGGGACGCACGTGTACCGCGAC
ATCAACGAGTTCAACCCGCTCAACATGACGCACCCGTTCAGCGAGCCGTACCTGGACGCCGACTCGCTGAGCCCG
GTGGGCGACGGCGACGCCAACTCGGTGAACTTGGTGCTGTCGCAGGACTGCGCCGGCTTCAACCTGGGCTCCTTC
TTCCTGCGGCGCAGCGCGTGGACGGAGCGGCTGCTGGACATCTGGTGGGACCCGGTGGCGTACGAGCAGAAGCAC
ATGGAGTGGGACCACAAGGAGCAGGACGCACTGGAGCAGCTGTACGAGAGCCAGCCGTGGGTGAGGAAGCACACG
GGCTTCCTGCCGCAGCGCAAGATCAACAGCTTCCCGCCGGCGGCGTGCGGGGACGGCAGCGGCAAGAACCACACG
CGCTACCACTACAACGAGCACGAGCGAGACTTTGTCGTCAACATGGCCGGCTGCGAATGGGGCCGCGACTGCTGG
GGCGAGATGTACCACTACCGCGAGTTCAGCTACTGGCTCAACCGCAACCCGTGGGAGCGCTTCAAGGAAGACTTG
GTGGCCGTGCTGTGGTTCAAGCTCACGGGCCAGCGGGTCAAGTTGTAA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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