Protein ID | Hirsu2|7727 |
Gene name | |
Location | Contig_467:1521..2178 |
Strand | - |
Gene length (bp) | 657 |
Transcript length (bp) | 582 |
Coding sequence length (bp) | 582 |
Protein length (aa) | 194 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01124 | MAPEG | MAPEG family | 2.5E-15 | 62 | 185 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016021 | integral component of membrane | Yes |
GO:0005575 | cellular_component | No |
GO:0110165 | cellular anatomical entity | No |
GO:0031224 | intrinsic component of membrane | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 122 | 144 | 22 |
2 | 164 | 186 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|7727 MSSGLGFDPSRNLSLLTVGPPLPSLSSSGGRREQGPFLVGRKKKKKLTEEDDQVPVAFATCWLPHAYAVALAGRE YDNAYPRSLRDSVMKSSTLDKTTKQRIVRAESASRNGFESLGFFAAGVAAATAAGTSAPLLNALSGGYVASRAAY VVVYARLQDNRRAAPLRSLLWLVGAVLAGAIWVRAGLDLARPA* |
Coding | >Hirsu2|7727 ATGAGCTCCGGCCTCGGCTTCGACCCCAGCCGGAACCTGTCGCTGCTGACGGTTGGACCCCCCCTCCCCTCCCTT TCGTCCTCGGGAGGAAGAAGAGAGCAAGGCCCTTTTCTCGTCGGAAGGAAGAAGAAGAAGAAGCTGACGGAGGAG GACGACCAGGTTCCGGTGGCGTTCGCAACATGCTGGCTCCCGCACGCGTACGCGGTGGCGCTGGCCGGGCGGGAG TACGACAACGCCTACCCGCGCAGCCTGCGCGACAGCGTGATGAAGAGCTCGACGCTGGACAAGACGACGAAGCAG CGGATCGTGCGGGCCGAGAGCGCGTCGCGCAACGGCTTCGAGTCGCTCGGCTTCTTCGCGGCCGGCGTGGCGGCG GCCACGGCGGCCGGCACGTCGGCGCCGCTGCTCAACGCCCTCAGCGGCGGCTACGTGGCGTCGCGGGCCGCCTAC GTCGTCGTCTACGCCCGCCTGCAGGACAACCGGCGCGCGGCGCCGCTGCGGTCGCTGCTGTGGCTCGTCGGCGCC GTCCTGGCCGGCGCCATCTGGGTCCGGGCCGGGCTCGACCTGGCGCGGCCGGCCTGA |
Transcript | >Hirsu2|7727 ATGAGCTCCGGCCTCGGCTTCGACCCCAGCCGGAACCTGTCGCTGCTGACGGTTGGACCCCCCCTCCCCTCCCTT TCGTCCTCGGGAGGAAGAAGAGAGCAAGGCCCTTTTCTCGTCGGAAGGAAGAAGAAGAAGAAGCTGACGGAGGAG GACGACCAGGTTCCGGTGGCGTTCGCAACATGCTGGCTCCCGCACGCGTACGCGGTGGCGCTGGCCGGGCGGGAG TACGACAACGCCTACCCGCGCAGCCTGCGCGACAGCGTGATGAAGAGCTCGACGCTGGACAAGACGACGAAGCAG CGGATCGTGCGGGCCGAGAGCGCGTCGCGCAACGGCTTCGAGTCGCTCGGCTTCTTCGCGGCCGGCGTGGCGGCG GCCACGGCGGCCGGCACGTCGGCGCCGCTGCTCAACGCCCTCAGCGGCGGCTACGTGGCGTCGCGGGCCGCCTAC GTCGTCGTCTACGCCCGCCTGCAGGACAACCGGCGCGCGGCGCCGCTGCGGTCGCTGCTGTGGCTCGTCGGCGCC GTCCTGGCCGGCGCCATCTGGGTCCGGGCCGGGCTCGACCTGGCGCGGCCGGCCTGA |
Gene | >Hirsu2|7727 ATGAGCTCCGGCCTCGGCTTCGACCCCAGCCGGAACCTGTCGCTGCTGACGGTTGGACCCCCCCTCCCCTCCCTT TCGTCCTCGGGAGGAAGAAGAGAGCAAGGCCCTTTTCTCGTCGGAAGGAAGAAGAAGAAGAAGCTGACGGAGGAG GACGACCAGGTTCCGGTGGCGTTCGCAACATGCTGGCTCCCGCACGCGTACGCGGTGGCGCTGGCCGGGCGGGAG TACGACAACGCCTACCCGCGCAGCCTGCGCGACAGCGTGATGAAGAGCTCGACGCTGGACAAGACGGTGCGTTTC TTTCTGCCTTGGATGGCGGCCCGTCCGGCGCGCGCGGCTGACAGGACGGGAGCGGGAAAACAAAAGACGAAGCAG CGGATCGTGCGGGCCGAGAGCGCGTCGCGCAACGGCTTCGAGTCGCTCGGCTTCTTCGCGGCCGGCGTGGCGGCG GCCACGGCGGCCGGCACGTCGGCGCCGCTGCTCAACGCCCTCAGCGGCGGCTACGTGGCGTCGCGGGCCGCCTAC GTCGTCGTCTACGCCCGCCTGCAGGACAACCGGCGCGCGGCGCCGCTGCGGTCGCTGCTGTGGCTCGTCGGCGCC GTCCTGGCCGGCGCCATCTGGGTCCGGGCCGGGCTCGACCTGGCGCGGCCGGCCTGA |