© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|77 |
| Gene name | |
| Location | Contig_101:4078..4681 |
| Strand | - |
| Gene length (bp) | 603 |
| Transcript length (bp) | 603 |
| Coding sequence length (bp) | 603 |
| Protein length (aa) | 201 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00385 | Chromo | Chromo (CHRromatin Organisation MOdifier) domain | 5.3E-10 | 146 | 193 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | Nuclear localization signal | 0.5287 | 0.5425 | 0.0832 | 0.0677 | 0.1822 | 0.114 | 0.23 | 0.2167 | 0.145 | 0.0236 |
| Orthofinder run ID | 4 |
| Orthogroup | 10440 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|77 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|77 MGYQPRSKGHVKGQLETFSTHAIERVRGLRELHERTAQLITRSQERQARYHNKGREAMSFNEGDWVLISTKSLPL RRPTKKLTEKYVGPYQIEQVVGGHKLAYRLRLPSTVKIHNVLPISSLEPYWSRDQEPVEPEDHPFMAESTYNVEQ ILEHRGPKSRRRYLVKWRGHRDEENSWVSRSDFVDKEFLADYDRSVSAAP* |
| Coding | >Hirsu2|77 ATGGGCTACCAGCCACGTTCTAAGGGGCACGTCAAGGGACAACTGGAAACCTTCAGTACGCATGCCATAGAGCGC GTCCGAGGTCTCAGAGAACTTCACGAACGCACAGCGCAGCTCATTACAAGGTCTCAAGAGCGTCAGGCACGGTAC CATAATAAGGGTCGAGAAGCGATGTCCTTCAACGAAGGCGATTGGGTTCTTATCTCTACTAAAAGTCTTCCGCTG CGGCGCCCAACTAAGAAGTTGACCGAGAAATACGTCGGGCCCTATCAGATTGAACAAGTAGTTGGGGGGCACAAA CTAGCCTATCGTCTTCGCCTGCCATCTACCGTCAAGATTCATAACGTCCTGCCTATTAGCAGCTTGGAGCCATAC TGGAGCCGAGACCAAGAGCCAGTTGAACCTGAGGATCACCCGTTCATGGCAGAGTCTACGTATAACGTGGAGCAG ATCCTCGAGCATCGTGGTCCGAAGAGTCGTCGGAGATACCTAGTAAAATGGAGAGGCCATAGGGACGAGGAGAAC TCTTGGGTATCCCGAAGTGATTTCGTGGACAAGGAGTTCTTGGCGGACTACGATCGATCCGTTAGCGCCGCGCCC TAG |
| Transcript | >Hirsu2|77 ATGGGCTACCAGCCACGTTCTAAGGGGCACGTCAAGGGACAACTGGAAACCTTCAGTACGCATGCCATAGAGCGC GTCCGAGGTCTCAGAGAACTTCACGAACGCACAGCGCAGCTCATTACAAGGTCTCAAGAGCGTCAGGCACGGTAC CATAATAAGGGTCGAGAAGCGATGTCCTTCAACGAAGGCGATTGGGTTCTTATCTCTACTAAAAGTCTTCCGCTG CGGCGCCCAACTAAGAAGTTGACCGAGAAATACGTCGGGCCCTATCAGATTGAACAAGTAGTTGGGGGGCACAAA CTAGCCTATCGTCTTCGCCTGCCATCTACCGTCAAGATTCATAACGTCCTGCCTATTAGCAGCTTGGAGCCATAC TGGAGCCGAGACCAAGAGCCAGTTGAACCTGAGGATCACCCGTTCATGGCAGAGTCTACGTATAACGTGGAGCAG ATCCTCGAGCATCGTGGTCCGAAGAGTCGTCGGAGATACCTAGTAAAATGGAGAGGCCATAGGGACGAGGAGAAC TCTTGGGTATCCCGAAGTGATTTCGTGGACAAGGAGTTCTTGGCGGACTACGATCGATCCGTTAGCGCCGCGCCC TAG |
| Gene | >Hirsu2|77 ATGGGCTACCAGCCACGTTCTAAGGGGCACGTCAAGGGACAACTGGAAACCTTCAGTACGCATGCCATAGAGCGC GTCCGAGGTCTCAGAGAACTTCACGAACGCACAGCGCAGCTCATTACAAGGTCTCAAGAGCGTCAGGCACGGTAC CATAATAAGGGTCGAGAAGCGATGTCCTTCAACGAAGGCGATTGGGTTCTTATCTCTACTAAAAGTCTTCCGCTG CGGCGCCCAACTAAGAAGTTGACCGAGAAATACGTCGGGCCCTATCAGATTGAACAAGTAGTTGGGGGGCACAAA CTAGCCTATCGTCTTCGCCTGCCATCTACCGTCAAGATTCATAACGTCCTGCCTATTAGCAGCTTGGAGCCATAC TGGAGCCGAGACCAAGAGCCAGTTGAACCTGAGGATCACCCGTTCATGGCAGAGTCTACGTATAACGTGGAGCAG ATCCTCGAGCATCGTGGTCCGAAGAGTCGTCGGAGATACCTAGTAAAATGGAGAGGCCATAGGGACGAGGAGAAC TCTTGGGTATCCCGAAGTGATTTCGTGGACAAGGAGTTCTTGGCGGACTACGATCGATCCGTTAGCGCCGCGCCC TAG |