© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|7673 |
| Gene name | |
| Location | Contig_46:21310..23985 |
| Strand | - |
| Gene length (bp) | 2675 |
| Transcript length (bp) | 1545 |
| Coding sequence length (bp) | 1545 |
| Protein length (aa) | 515 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04116 | FA_hydroxylase | Fatty acid hydroxylase | 5.0E-23 | 74 | 209 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O94298|SUR2_SCHPO | Sphingolipid C4-hydroxylase sur2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sur2 PE=3 SV=1 | 38 | 214 | 2.0E-39 |
| sp|Q9AST3|SBH2_ARATH | Sphinganine C4-monooxygenase 2 OS=Arabidopsis thaliana GN=SBH2 PE=1 SV=1 | 41 | 210 | 2.0E-37 |
| sp|Q8VYI1|SBH1_ARATH | Sphinganine C4-monooxygenase 1 OS=Arabidopsis thaliana GN=SBH1 PE=1 SV=1 | 67 | 210 | 2.0E-36 |
| sp|P38992|SUR2_YEAST | Sphingolipid C4-hydroxylase SUR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SUR2 PE=1 SV=1 | 65 | 241 | 1.0E-29 |
| sp|Q9ZW22|SMO21_ARATH | Methylsterol monooxygenase 2-1 OS=Arabidopsis thaliana GN=SMO2-1 PE=2 SV=2 | 66 | 188 | 3.0E-12 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O94298|SUR2_SCHPO | Sphingolipid C4-hydroxylase sur2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sur2 PE=3 SV=1 | 38 | 214 | 2.0E-39 |
| sp|Q9AST3|SBH2_ARATH | Sphinganine C4-monooxygenase 2 OS=Arabidopsis thaliana GN=SBH2 PE=1 SV=1 | 41 | 210 | 2.0E-37 |
| sp|Q8VYI1|SBH1_ARATH | Sphinganine C4-monooxygenase 1 OS=Arabidopsis thaliana GN=SBH1 PE=1 SV=1 | 67 | 210 | 2.0E-36 |
| sp|P38992|SUR2_YEAST | Sphingolipid C4-hydroxylase SUR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SUR2 PE=1 SV=1 | 65 | 241 | 1.0E-29 |
| sp|Q9ZW22|SMO21_ARATH | Methylsterol monooxygenase 2-1 OS=Arabidopsis thaliana GN=SMO2-1 PE=2 SV=2 | 66 | 188 | 3.0E-12 |
| sp|Q8VWZ8|SMO22_ARATH | Methylsterol monooxygenase 2-2 OS=Arabidopsis thaliana GN=SMO2-2 PE=2 SV=1 | 73 | 188 | 2.0E-11 |
| sp|Q5ZLL6|MSMO1_CHICK | Methylsterol monooxygenase 1 OS=Gallus gallus GN=MSMO1 PE=2 SV=1 | 66 | 223 | 6.0E-11 |
| sp|Q8L7W5|SMO11_ARATH | Methylsterol monooxygenase 1-1 OS=Arabidopsis thaliana GN=SMO1-1 PE=1 SV=1 | 73 | 242 | 1.0E-09 |
| sp|Q55D54|MSMOB_DICDI | Putative methylsterol monooxygenase DDB_G0269788 OS=Dictyostelium discoideum GN=DDB_G0269788 PE=3 SV=1 | 69 | 228 | 2.0E-09 |
| sp|O35532|MSMO1_RAT | Methylsterol monooxygenase 1 OS=Rattus norvegicus GN=Msmo1 PE=2 SV=1 | 79 | 209 | 4.0E-09 |
| sp|Q9CRA4|MSMO1_MOUSE | Methylsterol monooxygenase 1 OS=Mus musculus GN=Msmo1 PE=1 SV=1 | 79 | 209 | 4.0E-09 |
| sp|Q6UGB2|MSMO1_PIG | Methylsterol monooxygenase 1 OS=Sus scrofa GN=MSMO1 PE=2 SV=1 | 66 | 209 | 4.0E-09 |
| sp|P52579|IFRH_TOBAC | Isoflavone reductase homolog A622 OS=Nicotiana tabacum PE=2 SV=1 | 234 | 448 | 4.0E-09 |
| sp|Q7ZW77|MSMO1_DANRE | Methylsterol monooxygenase 1 OS=Danio rerio GN=msmo1 PE=2 SV=1 | 66 | 209 | 6.0E-09 |
| sp|Q7SBB6|ERG3_NEUCR | Probable Delta(7)-sterol 5(6)-desaturase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=NCU06207 PE=3 SV=1 | 72 | 235 | 6.0E-09 |
| sp|Q5R574|MSMO1_PONAB | Methylsterol monooxygenase 1 OS=Pongo abelii GN=MSMO1 PE=2 SV=1 | 66 | 209 | 8.0E-09 |
| sp|Q15800|MSMO1_HUMAN | Methylsterol monooxygenase 1 OS=Homo sapiens GN=MSMO1 PE=1 SV=1 | 66 | 209 | 8.0E-09 |
| sp|Q9UUH4|MSMO_SCHPO | Methylsterol monooxygenase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=erg25 PE=3 SV=1 | 72 | 242 | 2.0E-08 |
| sp|Q4R4Q4|MSMO1_MACFA | Methylsterol monooxygenase 1 OS=Macaca fascicularis GN=MSMO1 PE=2 SV=1 | 66 | 209 | 4.0E-08 |
| sp|Q1LX59|C2512_DANRE | Cholesterol 25-hydroxylase-like protein 1, member 2 OS=Danio rerio GN=ch25hl1.2 PE=3 SV=1 | 78 | 210 | 1.0E-07 |
| sp|P53045|MSMO_YEAST | Methylsterol monooxygenase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERG25 PE=1 SV=1 | 78 | 236 | 3.0E-07 |
| sp|Q8J207|ERG3_LEPMC | Delta(7)-sterol 5(6)-desaturase OS=Leptosphaeria maculans GN=ERG3 PE=3 SV=1 | 73 | 223 | 8.0E-07 |
| sp|P52576|IFR_PEA | Isoflavone reductase OS=Pisum sativum GN=IFR PE=2 SV=1 | 282 | 507 | 1.0E-06 |
| sp|Q567X1|C25L1_DANRE | Cholesterol 25-hydroxylase-like protein 1, member 1 OS=Danio rerio GN=ch25hl1.1 PE=2 SV=2 | 77 | 214 | 3.0E-06 |
| sp|Q5PRC0|CH25H_DANRE | Cholesterol 25-hydroxylase-like protein OS=Danio rerio GN=ch25h PE=2 SV=1 | 77 | 211 | 6.0E-06 |
| sp|P32353|ERG3_YEAST | Delta(7)-sterol 5(6)-desaturase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERG3 PE=1 SV=1 | 68 | 210 | 9.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0005506 | iron ion binding | Yes |
| GO:0008610 | lipid biosynthetic process | Yes |
| GO:0008152 | metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0046872 | metal ion binding | No |
| GO:0005488 | binding | No |
| GO:0043167 | ion binding | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0006629 | lipid metabolic process | No |
| GO:0009058 | biosynthetic process | No |
| GO:0046914 | transition metal ion binding | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0003674 | molecular_function | No |
| GO:0008150 | biological_process | No |
| GO:0043169 | cation binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 22 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 15 | 37 | 22 |
| 2 | 58 | 80 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|7673 MTGSEDHDLAVWIGRVRSVFAATINLLSLSGIDFKMIATTMSRSRAVRSVVGQTELEVLTGSLIYWYIVPAFQFV FALVVADASMYCIHRLGHTNKWIYKHIHSHHHRLYVPYSWGGSYNHPVDSLFLDGTSYAIGCWASGISIKLSVFL FAYATFKNVLDHCGFVFPWNPMRSLTGTDADFHDVHHQSWGLKMNFGAHLSIWDHMMGTHFSDKELISKLRLKNR IAAEELVSKRSTKSKKGAFFEQRGINVRVSDYSTDSVLQILNETNASALISFNNSDGQTFVDVHSAFLEACRKSK NCKRFIPSEFAGNIDDFPLHPSYFKTSRVPFRKILEQESDVEWTIFNNGWLMDYFLTEEKSYMPSIPNEFPIDPN NWRACIRGSGNEVQSFTSGRDVAKALIALLSAAEWERTTYITGQWSTFNEMLRAMEEFYGRPMDKTYKSEEDIHR DTLLPPTAENLEALYLSSVEEMMITASGACPREKTMNQRDKFFPSIRFLTLEELLLQTGSTRSK* |
| Coding | >Hirsu2|7673 ATGACGGGAAGCGAGGATCATGATCTAGCTGTCTGGATCGGTCGAGTACGCTCCGTCTTTGCAGCAACCATCAAC TTGCTCTCCCTCAGTGGCATCGACTTCAAGATGATAGCGACCACTATGTCCAGATCCAGAGCTGTCCGCTCTGTA GTTGGACAAACTGAGCTTGAAGTACTAACAGGTAGTCTGATCTACTGGTACATCGTGCCAGCTTTCCAATTTGTA TTTGCCCTGGTCGTTGCCGATGCCTCCATGTACTGCATTCATCGCCTAGGACATACCAACAAATGGATCTATAAA CACATCCACTCGCATCATCATAGGCTGTACGTCCCCTATTCGTGGGGCGGGTCGTACAACCACCCAGTCGATAGC TTGTTCCTCGACGGCACCAGTTATGCCATCGGCTGCTGGGCATCCGGAATATCAATCAAGCTCTCGGTTTTTCTC TTTGCATACGCGACATTCAAGAATGTACTTGATCATTGCGGCTTCGTCTTTCCGTGGAATCCGATGCGATCGCTC ACGGGAACTGATGCCGACTTCCACGACGTCCATCACCAGAGTTGGGGCTTGAAGATGAACTTCGGAGCCCATTTG AGTATCTGGGATCACATGATGGGAACTCATTTTTCCGATAAAGAACTGATTTCGAAGCTTCGCCTTAAGAATCGC ATTGCGGCCGAGGAGCTCGTATCCAAAAGATCGACCAAGTCCAAGAAAGGGGCCTTCTTCGAGCAACGTGGTATA AATGTGCGCGTCAGTGATTACAGCACGGATTCCGTCCTCCAGATCTTGAACGAGACGAATGCCAGTGCTTTGATA TCATTCAACAATAGCGATGGCCAGACCTTCGTCGATGTGCACAGCGCCTTCCTGGAAGCTTGTCGCAAGTCGAAG AACTGCAAGCGGTTCATACCCTCAGAATTCGCTGGCAATATTGATGATTTTCCACTGCATCCCAGCTATTTCAAA ACGTCACGGGTGCCGTTTCGCAAGATTCTTGAACAAGAGTCGGATGTGGAGTGGACGATATTCAACAACGGTTGG TTGATGGACTACTTCTTGACCGAAGAGAAATCGTACATGCCTTCCATCCCGAATGAATTTCCAATTGATCCAAAC AACTGGAGGGCGTGTATCCGGGGTTCTGGTAATGAGGTGCAGTCTTTCACAAGTGGTCGAGACGTCGCGAAAGCG CTCATTGCGCTGCTCAGCGCGGCGGAATGGGAGCGCACGACGTACATCACCGGCCAATGGTCGACCTTTAACGAA ATGTTGCGAGCCATGGAAGAATTCTACGGCCGACCGATGGACAAGACTTACAAGTCTGAGGAGGATATCCATCGC GACACTTTGCTGCCTCCTACAGCCGAAAATCTGGAGGCACTCTATCTTTCAAGCGTAGAGGAGATGATGATAACG GCTTCAGGCGCCTGTCCTCGTGAAAAGACCATGAATCAGCGCGACAAGTTCTTCCCTAGCATTCGTTTTTTAACG CTTGAGGAGCTCCTGTTGCAGACAGGGTCTACAAGGTCAAAGTAA |
| Transcript | >Hirsu2|7673 ATGACGGGAAGCGAGGATCATGATCTAGCTGTCTGGATCGGTCGAGTACGCTCCGTCTTTGCAGCAACCATCAAC TTGCTCTCCCTCAGTGGCATCGACTTCAAGATGATAGCGACCACTATGTCCAGATCCAGAGCTGTCCGCTCTGTA GTTGGACAAACTGAGCTTGAAGTACTAACAGGTAGTCTGATCTACTGGTACATCGTGCCAGCTTTCCAATTTGTA TTTGCCCTGGTCGTTGCCGATGCCTCCATGTACTGCATTCATCGCCTAGGACATACCAACAAATGGATCTATAAA CACATCCACTCGCATCATCATAGGCTGTACGTCCCCTATTCGTGGGGCGGGTCGTACAACCACCCAGTCGATAGC TTGTTCCTCGACGGCACCAGTTATGCCATCGGCTGCTGGGCATCCGGAATATCAATCAAGCTCTCGGTTTTTCTC TTTGCATACGCGACATTCAAGAATGTACTTGATCATTGCGGCTTCGTCTTTCCGTGGAATCCGATGCGATCGCTC ACGGGAACTGATGCCGACTTCCACGACGTCCATCACCAGAGTTGGGGCTTGAAGATGAACTTCGGAGCCCATTTG AGTATCTGGGATCACATGATGGGAACTCATTTTTCCGATAAAGAACTGATTTCGAAGCTTCGCCTTAAGAATCGC ATTGCGGCCGAGGAGCTCGTATCCAAAAGATCGACCAAGTCCAAGAAAGGGGCCTTCTTCGAGCAACGTGGTATA AATGTGCGCGTCAGTGATTACAGCACGGATTCCGTCCTCCAGATCTTGAACGAGACGAATGCCAGTGCTTTGATA TCATTCAACAATAGCGATGGCCAGACCTTCGTCGATGTGCACAGCGCCTTCCTGGAAGCTTGTCGCAAGTCGAAG AACTGCAAGCGGTTCATACCCTCAGAATTCGCTGGCAATATTGATGATTTTCCACTGCATCCCAGCTATTTCAAA ACGTCACGGGTGCCGTTTCGCAAGATTCTTGAACAAGAGTCGGATGTGGAGTGGACGATATTCAACAACGGTTGG TTGATGGACTACTTCTTGACCGAAGAGAAATCGTACATGCCTTCCATCCCGAATGAATTTCCAATTGATCCAAAC AACTGGAGGGCGTGTATCCGGGGTTCTGGTAATGAGGTGCAGTCTTTCACAAGTGGTCGAGACGTCGCGAAAGCG CTCATTGCGCTGCTCAGCGCGGCGGAATGGGAGCGCACGACGTACATCACCGGCCAATGGTCGACCTTTAACGAA ATGTTGCGAGCCATGGAAGAATTCTACGGCCGACCGATGGACAAGACTTACAAGTCTGAGGAGGATATCCATCGC GACACTTTGCTGCCTCCTACAGCCGAAAATCTGGAGGCACTCTATCTTTCAAGCGTAGAGGAGATGATGATAACG GCTTCAGGCGCCTGTCCTCGTGAAAAGACCATGAATCAGCGCGACAAGTTCTTCCCTAGCATTCGTTTTTTAACG CTTGAGGAGCTCCTGTTGCAGACAGGGTCTACAAGGTCAAAGTAA |
| Gene | >Hirsu2|7673 ATGACGGGAAGCGAGGATCATGATCTAGCTGTCTGGATCGGTCGAGTACGCTCCGTCTTTGCAGCAACCATCAAC TTGCTCTCCCTCAGTGGCATCGACTTCAAGATGATAGCGACCACTATGTCCAGATCCAGAGCTGTCCGCTCTGTA GTTGGACAAACTGAGCTTGAAGTACTAACAGGTAGTCTGATCTACTGGTACATCGTGCCAGCTTTCCAATTTGTA TTTGCCCTGGTCGTTGCCGATGCCTCCATGTACTGCATTCATCGCCTAGGACATACCAACAAATGGATCTATAGT AAGCCCCGAGAACTCTGCCCAAAGAATTTCCAGCAACTGAAAAGTTTTAGAACACATCCACTCGCATCATCATAG GCTGTACGTCCCCTATTCGTGGGGCGGGTCGTACAACCACCCAGTCGATAGCTTGTTCCTCGACGGCACCAGTTA TGCCATCGGCTGCTGGGCATCCGGAATATCAATCAAGCTCTCGGTTTTTCTCTTTGCATACGCGACATTCAAGAA TGTACTTGATCATTGCGGCTTCGTCTTTCCGTGGAATCCGATGCGATCGCTCACGGGAACTGATGCCGACTTCCA CGACGTCCATCACCAGAGTTGGGGCTTGAAGGTAAGTTCTGCACCCGGACCAGTTGCAATAGGCTTCGGCTGATT TCGACCAAGATGAACTTCGGAGCCCATTTGAGTATCTGGGATCACATGATGGGAACTCATTTTTCCGATAAAGAA CTGATTTCGAAGCTTCGCCTTAAGAATCGCATTGCGGCCGAGGAGCTCGTATCCAAAAGGTAGCGTCGAGCTTGC TATTGATATGTGGCTTACCAAAGACGAAAAGGTCTGTAGCTAGGGTGATGTCTCAATGTTTATTGGTGAATAAAA AGGTCTCATCTTCGTCAAGGAATAAAAGTCGCTGGGGCCATGTGTGGATCGTACTATACCTGCTTCAAGTTTGCT TAGATCGTTCGAAAATCGTAAACGAATAAACGGTTATTCCTGGGCATATACAATCCCAAAAGAAACGTCGAGGCT ACAAGAGTTTGAAATATCAGCACGACGTGCAGGATCCCGACTACGTACGGAGCCGTTCCCAGTAAGCCGCATGTG TATGTAGTGTAGTACGTTGTATGTTGCGTGAATGCTGCGAGTGATATTCATCTTGGCATGAGGCTCTGATCGTTT CCTGCCGCCAACTCACGTGTATAAGTGATCTGCTACGGGAACAGGTGTCCCAAACCACTTCCCTGGATCATTTAC AGGCTATCCTGCGCCTTTCTGCCCTCTTCTCTCGCTGATGATAGAACTGATCATGGCTTCTGGTAGCCGTATTTT GTCCCTGTTCCTGTTCCGTTTTGGACTGTACGCCGGCTATTTGATTCGCCACAGCACGGCTCCGGCATGCACGTG GAATTAACCGACAGTAAAACGACGAGCTCGATGAGTGAGCGGAGCATAAAAGCACGGCTTGCTCCTCTCTCAAGC AGGTATCTTGGTCGTTTTTTTTTTTTTTGGCGAACCTAGATGCGACCTGCACAATGACAAGCAACCAGATTAAAG TCATTGCGCTATGCTCGGTGGGAAACCTCGGCAAATATGTCTGCGATGCATTGCTTGCCGACGGCCGCTATCAAT TTGTCGTAATCTCTCGGCAGGTAAGTAAGTCCACGTCGTGTAGGACTGGTTTCTGGCCCGATACATGTACTGACC AGATCGACCAAGTCCAAGAAAGGGGCCTTCTTCGAGCAACGTGGTATAAATGTGCGCGTCAGTGATTACAGCACG GATTCCGTCCTCCAGATCTTGAACGAGACGAATGCCAGTGCTTTGATATCATTCAACAATAGCGATGGCCAGACC TTCGTCGATGTGCACAGCGCCTTCCTGGAAGCTTGTCGCAAGTCGAAGAACTGCAAGCGGTTCATACCCTCAGAA TTCGCTGGCAATATTGATGATTTTCCACTGCATCCCAGCTATTTCAAAACGTCACGGGTGCCGTTTCGCAAGATT CTTGAACAAGAGTCGGATGTGGAGTGGACGATATTCAACAACGGTTGGTTGATGGACTACTTCTTGACCGAAGAG AAATCGTACATGCCTTCCATCCCGAATGAATTTCCAATTGATCCAAACAACTGGAGGGCGTGTATCCGGGGTTCT GGTAATGAGGTGCAGTCTTTCACAAGTGGTCGAGACGTCGCGAAAGCGCTCATTGCGCTGCTCAGCGCGGCGGAA TGGGTGAGATCCCCTCCCACCGAGACTTTTGATGAGTGGCTGCTTACACGACATGTAGGAGCGCACGACGTACAT CACCGGCCAATGGTCGACCTTTAACGAAATGTTGCGAGCCATGGAAGAATTCTACGGTTCGTGCAACTTTGCTCA TTCCATCACGTCACCGACTGACAAGTGGTGTAGGCCGACCGATGGACAAGACTTACAAGTCTGAGGAGGATATCC ATCGCGACACTTTGCTGCCTCCTACAGCCGAAAATCTGGAGGCACTCTATCTTTCAAGCGTAGAGGAGATGATGA TAACGGCTTCAGGCGCCTGTCCTCGTGAAAAGACCATGAATCAGCGCGACAAGTTCTTCCCTAGCATTCGTTTTT TAACGCTTGAGGAGCTCCTGTTGCAGACAGGGTCTACAAGGTCAAAGTAA |