Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7670
Gene name
LocationContig_46:12951..14792
Strand+
Gene length (bp)1841
Transcript length (bp)1668
Coding sequence length (bp)1668
Protein length (aa) 556

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13520 AA_permease_2 Amino acid permease 1.5E-41 71 518
PF00324 AA_permease Amino acid permease 4.5E-19 88 528

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O59813|YCT3_SCHPO Uncharacterized amino-acid permease C794.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC794.03 PE=2 SV=1 27 528 2.0E-75
sp|Q9UT18|THI9_SCHPO Thiamine transporter thi9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=thi9 PE=1 SV=1 33 525 5.0E-61
sp|Q9ZU50|BAT1_ARATH Amino-acid permease BAT1 OS=Arabidopsis thaliana GN=BAT1 PE=2 SV=2 39 546 1.0E-56
sp|B9EXZ6|BAT1_ORYSJ Amino-acid permease BAT1 homolog OS=Oryza sativa subsp. japonica GN=BAT1 PE=2 SV=1 54 547 1.0E-51
sp|O60113|YG64_SCHPO Uncharacterized amino-acid permease C15C4.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.04c PE=3 SV=1 37 542 2.0E-46
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Swissprot ID Swissprot Description Start End E-value
sp|O59813|YCT3_SCHPO Uncharacterized amino-acid permease C794.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC794.03 PE=2 SV=1 27 528 2.0E-75
sp|Q9UT18|THI9_SCHPO Thiamine transporter thi9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=thi9 PE=1 SV=1 33 525 5.0E-61
sp|Q9ZU50|BAT1_ARATH Amino-acid permease BAT1 OS=Arabidopsis thaliana GN=BAT1 PE=2 SV=2 39 546 1.0E-56
sp|B9EXZ6|BAT1_ORYSJ Amino-acid permease BAT1 homolog OS=Oryza sativa subsp. japonica GN=BAT1 PE=2 SV=1 54 547 1.0E-51
sp|O60113|YG64_SCHPO Uncharacterized amino-acid permease C15C4.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.04c PE=3 SV=1 37 542 2.0E-46
sp|Q9US40|YFZ1_SCHPO Uncharacterized amino-acid permease C1039.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.01 PE=3 SV=1 32 542 4.0E-45
sp|O74537|YCQ4_SCHPO Uncharacterized amino-acid permease C74.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC74.04 PE=3 SV=1 12 542 4.0E-43
sp|Q10087|YAO8_SCHPO Uncharacterized amino-acid permease C11D3.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.08c PE=3 SV=1 40 551 6.0E-38
sp|Q9C0Z0|YKM2_SCHPO Uncharacterized amino-acid permease PB24D3.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB24D3.02c PE=3 SV=1 37 547 2.0E-36
sp|O74248|GPT1_CANAX Putative polyamine transporter OS=Candida albicans GN=GPT1 PE=3 SV=1 45 547 3.0E-36
sp|Q09887|YC9D_SCHPO Uncharacterized amino-acid permease C584.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC584.13 PE=3 SV=1 32 542 4.0E-34
sp|P32837|UGA4_YEAST GABA-specific permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UGA4 PE=1 SV=1 49 514 2.0E-32
sp|O59942|AAP2_NEUCR Amino-acid permease 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=aap-2 PE=2 SV=2 51 542 1.0E-31
sp|P19807|HNM1_YEAST Choline transport protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HNM1 PE=1 SV=1 26 529 2.0E-22
sp|P36029|TPO5_YEAST Polyamine transporter TPO5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO5 PE=1 SV=1 48 553 7.0E-09
sp|P53744|BIO5_YEAST 7-keto 8-aminopelargonic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BIO5 PE=1 SV=1 251 530 1.0E-07
sp|Q797A7|YFNA_BACSU Uncharacterized amino acid permease YfnA OS=Bacillus subtilis (strain 168) GN=yfnA PE=3 SV=1 48 468 3.0E-07
sp|O07576|YHDG_BACSU Uncharacterized amino acid permease YhdG OS=Bacillus subtilis (strain 168) GN=yhdG PE=2 SV=1 51 412 6.0E-06
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GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0016020 membrane Yes
GO:0008150 biological_process No
GO:0006810 transport No
GO:0051234 establishment of localization No
GO:0003674 molecular_function No
GO:0051179 localization No
GO:0005575 cellular_component No
GO:0005215 transporter activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 73 95 22
2 105 127 22
3 134 156 22
4 193 212 19
5 224 246 22
6 273 290 17
7 311 333 22
8 361 383 22
9 413 435 22
10 480 502 22
11 509 531 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7670
MTRLLDSSPTAILRGWTASPLERKTSRLLDGSDEVPEHGEQASARVVSKDDELLARLGYKRELNRGLGLFENWAA
TFSCMNFVSGMPVLFGWVMMTGGPQAAFTSWTIVSTVSCLLALAMAEIAAALPTAGGIYFWTFFLAGSEWGPFLS
WMTAWWNWSAWVLAVPGTQQGATNFLVSALQINFPDAAFLRDGWFSLLVILAGLLIALIPNITSQHLLRVYFRFA
IAIFFLLFFLFWLWFPIAVAGRFQPASFVFGKFHNGINHGPVPQASDAYCWVISFLFGAWEFGGYDASAHLAEET
QDAGKTVARGMWLSTLSTTVLSIPTLVLILFCIQDFDALIAANYANNWAEFLVQVVGPRGATAILVFSWIDCTCA
TAAVILSAQRVTFAISRDGILPASSVFRKVSGANSVPVNAALLVIAIAAAVSCTVLGSSVAFSAITATTVICQNM
SYLFVLLTRHTLGRSSFEPAPWNLGPLSRLIGYFCLLWIAFLSVILLLPQVFPVTLQTLNYSPVCLAIVTLVSVI
GWLFPFGRGGRYWFKGPCNTVSPPTQADRA*
Coding >Hirsu2|7670
ATGACTAGACTCCTCGACTCGTCCCCCACCGCCATCCTGCGCGGATGGACGGCCAGTCCGCTGGAGCGCAAGACG
TCCAGGCTGCTGGACGGGTCGGACGAGGTGCCGGAGCACGGAGAGCAGGCTTCCGCCCGGGTCGTTTCCAAGGAC
GACGAGCTGCTGGCCCGGCTGGGCTACAAGCGAGAGTTGAACCGCGGCCTGGGCCTGTTTGAGAACTGGGCGGCG
ACCTTCTCGTGCATGAACTTCGTCTCCGGCATGCCGGTCCTGTTCGGCTGGGTCATGATGACGGGCGGGCCGCAG
GCGGCCTTCACCTCCTGGACCATCGTCAGCACCGTCTCGTGCCTCCTGGCGCTGGCCATGGCCGAGATCGCGGCC
GCGCTGCCCACCGCCGGCGGCATCTACTTCTGGACCTTCTTCCTCGCCGGCTCCGAATGGGGCCCGTTCCTGAGC
TGGATGACGGCGTGGTGGAACTGGTCCGCCTGGGTCCTGGCCGTTCCCGGCACCCAGCAGGGCGCGACCAACTTC
CTCGTCTCTGCCCTGCAGATCAACTTCCCGGACGCGGCCTTCCTCCGCGACGGCTGGTTCTCCCTGCTCGTCATC
CTGGCCGGCCTGCTCATCGCCCTGATCCCCAACATCACGAGCCAGCACCTGCTACGGGTCTACTTCCGCTTCGCC
ATCGCCATCTTCTTCCTCCTCTTCTTCCTCTTCTGGCTCTGGTTCCCCATCGCCGTGGCCGGCCGGTTCCAGCCC
GCCAGCTTCGTCTTCGGCAAGTTCCACAACGGCATCAACCACGGCCCGGTCCCGCAGGCGTCCGACGCCTACTGC
TGGGTCATCAGCTTCCTCTTCGGCGCCTGGGAGTTTGGCGGCTACGACGCCTCCGCCCACTTGGCCGAGGAGACG
CAGGACGCCGGCAAGACGGTCGCCCGCGGCATGTGGCTGTCCACCCTGTCGACCACGGTCCTGTCCATCCCGACC
CTGGTCCTGATCCTGTTCTGCATCCAGGACTTCGACGCCTTGATCGCGGCCAACTACGCCAACAACTGGGCCGAG
TTCCTCGTCCAGGTCGTCGGCCCCCGTGGCGCCACCGCCATCCTCGTCTTCAGCTGGATCGACTGCACTTGCGCC
ACCGCCGCCGTCATCCTGTCGGCCCAGAGGGTGACGTTTGCCATCTCGCGCGACGGCATCCTGCCGGCCTCGTCC
GTCTTCAGAAAGGTGAGCGGTGCCAACTCGGTGCCGGTCAACGCGGCGCTCCTGGTCATCGCCATCGCGGCCGCC
GTCAGCTGCACCGTCCTCGGTTCGTCGGTCGCCTTCAGCGCCATCACGGCCACGACGGTCATCTGCCAGAACATG
AGCTACCTGTTCGTCCTGCTTACTCGACACACGCTCGGCAGATCGAGCTTCGAGCCGGCTCCGTGGAACCTCGGC
CCGCTGTCTCGACTGATAGGATACTTTTGCCTCCTCTGGATCGCCTTTCTCTCCGTCATCCTGCTTCTTCCCCAA
GTCTTCCCCGTCACTCTCCAGACGCTAAACTACTCCCCCGTCTGTCTGGCTATCGTGACGCTTGTGTCCGTCATT
GGCTGGCTCTTCCCTTTCGGCCGTGGCGGCCGGTACTGGTTTAAGGGTCCATGCAATACCGTGTCCCCGCCGACG
CAGGCCGACCGAGCTTGA
Transcript >Hirsu2|7670
ATGACTAGACTCCTCGACTCGTCCCCCACCGCCATCCTGCGCGGATGGACGGCCAGTCCGCTGGAGCGCAAGACG
TCCAGGCTGCTGGACGGGTCGGACGAGGTGCCGGAGCACGGAGAGCAGGCTTCCGCCCGGGTCGTTTCCAAGGAC
GACGAGCTGCTGGCCCGGCTGGGCTACAAGCGAGAGTTGAACCGCGGCCTGGGCCTGTTTGAGAACTGGGCGGCG
ACCTTCTCGTGCATGAACTTCGTCTCCGGCATGCCGGTCCTGTTCGGCTGGGTCATGATGACGGGCGGGCCGCAG
GCGGCCTTCACCTCCTGGACCATCGTCAGCACCGTCTCGTGCCTCCTGGCGCTGGCCATGGCCGAGATCGCGGCC
GCGCTGCCCACCGCCGGCGGCATCTACTTCTGGACCTTCTTCCTCGCCGGCTCCGAATGGGGCCCGTTCCTGAGC
TGGATGACGGCGTGGTGGAACTGGTCCGCCTGGGTCCTGGCCGTTCCCGGCACCCAGCAGGGCGCGACCAACTTC
CTCGTCTCTGCCCTGCAGATCAACTTCCCGGACGCGGCCTTCCTCCGCGACGGCTGGTTCTCCCTGCTCGTCATC
CTGGCCGGCCTGCTCATCGCCCTGATCCCCAACATCACGAGCCAGCACCTGCTACGGGTCTACTTCCGCTTCGCC
ATCGCCATCTTCTTCCTCCTCTTCTTCCTCTTCTGGCTCTGGTTCCCCATCGCCGTGGCCGGCCGGTTCCAGCCC
GCCAGCTTCGTCTTCGGCAAGTTCCACAACGGCATCAACCACGGCCCGGTCCCGCAGGCGTCCGACGCCTACTGC
TGGGTCATCAGCTTCCTCTTCGGCGCCTGGGAGTTTGGCGGCTACGACGCCTCCGCCCACTTGGCCGAGGAGACG
CAGGACGCCGGCAAGACGGTCGCCCGCGGCATGTGGCTGTCCACCCTGTCGACCACGGTCCTGTCCATCCCGACC
CTGGTCCTGATCCTGTTCTGCATCCAGGACTTCGACGCCTTGATCGCGGCCAACTACGCCAACAACTGGGCCGAG
TTCCTCGTCCAGGTCGTCGGCCCCCGTGGCGCCACCGCCATCCTCGTCTTCAGCTGGATCGACTGCACTTGCGCC
ACCGCCGCCGTCATCCTGTCGGCCCAGAGGGTGACGTTTGCCATCTCGCGCGACGGCATCCTGCCGGCCTCGTCC
GTCTTCAGAAAGGTGAGCGGTGCCAACTCGGTGCCGGTCAACGCGGCGCTCCTGGTCATCGCCATCGCGGCCGCC
GTCAGCTGCACCGTCCTCGGTTCGTCGGTCGCCTTCAGCGCCATCACGGCCACGACGGTCATCTGCCAGAACATG
AGCTACCTGTTCGTCCTGCTTACTCGACACACGCTCGGCAGATCGAGCTTCGAGCCGGCTCCGTGGAACCTCGGC
CCGCTGTCTCGACTGATAGGATACTTTTGCCTCCTCTGGATCGCCTTTCTCTCCGTCATCCTGCTTCTTCCCCAA
GTCTTCCCCGTCACTCTCCAGACGCTAAACTACTCCCCCGTCTGTCTGGCTATCGTGACGCTTGTGTCCGTCATT
GGCTGGCTCTTCCCTTTCGGCCGTGGCGGCCGGTACTGGTTTAAGGGTCCATGCAATACCGTGTCCCCGCCGACG
CAGGCCGACCGAGCTTGA
Gene >Hirsu2|7670
ATGACTAGACTCCTCGACTCGTCCCCCACCGCCATCCTGCGCGGATGGACGGCCAGTCCGCTGGAGCGCAAGACG
TCCAGGCTGCTGGACGGGTCGGACGAGGTGCCGGAGCACGGAGAGCAGGCTTCCGCCCGGGTCGTTTCCAAGGAC
GACGAGCTGCTGGCCCGGCTGGGCTACAAGCGAGGTAGCTTCGAGCCCGTCTCTACCCCCTCCCGGAACGATGCC
GTGCGCTGATTCGGGCAGAGTTGAACCGCGGCCTGGGCCTGTTTGAGAACTGGGCGGCGACCTTCTCGGTACTGG
GCGCAGTCCGGCGGCACGGCGAGCGGTGACGGCTGATCGGACGCAGTGCATGAACTTCGTCTCCGGCATGCCGGT
CCTGTTCGGCTGGGTCATGATGACGGGCGGGCCGCAGGCGGCCTTCACCTCCTGGACCATCGTCAGCACCGTCTC
GTGCCTCCTGGCGCTGGCCATGGCCGAGATCGCGGCCGCGCTGCCCACCGCCGGCGGCATCTACTTCTGGACCTT
CTTCCTCGCCGGCTCCGAATGGGGCCCGTTCCTGAGCTGGATGACGGCGGTACGCGTCCCGACCGTCATCTCTCC
AGCCCCCTTTGCCTGACTCTCTTCCTTCTTGGCAGTGGTGGAACTGGTCCGCCTGGGTCCTGGCCGTTCCCGGCA
CCCAGCAGGGCGCGACCAACTTCCTCGTCTCTGCCCTGCAGATCAACTTCCCGGACGCGGCCTTCCTCCGCGACG
GCTGGTTCTCCCTGCTCGTCATCCTGGCCGGCCTGCTCATCGCCCTGATCCCCAACATCACGAGCCAGCACCTGC
TACGGGTCTACTTCCGCTTCGCCATCGCCATCTTCTTCCTCCTCTTCTTCCTCTTCTGGCTCTGGTTCCCCATCG
CCGTGGCCGGCCGGTTCCAGCCCGCCAGCTTCGTCTTCGGCAAGTTCCACAACGGCATCAACCACGGCCCGGTCC
CGCAGGCGTCCGACGCCTACTGCTGGGTCATCAGCTTCCTCTTCGGCGCCTGGGAGTTTGGCGGCTACGACGCCT
CCGCCCACTTGGCCGAGGAGACGCAGGACGCCGGCAAGACGGTCGCCCGCGGCATGTGGCTGTCCACCCTGTCGA
CCACGGTCCTGTCCATCCCGACCCTGGTCCTGATCCTGTTCTGCATCCAGGACTTCGACGCCTTGATCGCGGCCA
ACTACGCCAACAACTGGGCCGAGTTCCTCGTCCAGGTCGTCGGCCCCCGTGGCGCCACCGCCATCCTCGTCTTCA
GCTGGATCGACTGCACTTGCGCCACCGCCGCCGTCATCCTGTCGGCCCAGAGGGTGACGTTTGCCATCTCGCGCG
ACGGCATCCTGCCGGCCTCGTCCGTCTTCAGAAAGGTGAGCGGTGCCAACTCGGTGCCGGTCAACGCGGCGCTCC
TGGTCATCGCCATCGCGGCCGCCGTCAGCTGCACCGTCCTCGGTTCGTCGGTCGCCTTCAGCGCCATCACGGCCA
CGACGGTCATCTGCCAGAACATGAGCTACCTGTTCGTCCTGCTTACTCGACACACGCTCGGCAGATCGAGCTTCG
AGCCGGCTCCGTGGAACCTCGGCCCGCTGTCTCGACTGATAGGATACTTTTGCCTCCTCTGGATCGCCTTTCTCT
CCGTCATCCTGCTTCTTCCCCAAGTCTTCCCCGTCACTCTCCAGACGCTAAACTACTCCCCCGTCTGTCTGGCTA
TCGTGACGCTTGTGTCCGTCATTGGCTGGCTCTTCCCTTTCGGCCGTGGCGGCCGGTACTGGTTTAAGGGTCCAT
GCAATACCGTGTCCCCGCCGACGCAGGCCGACCGAGCTTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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