© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|7660 |
| Gene name | |
| Location | Contig_459:947..1650 |
| Strand | - |
| Gene length (bp) | 703 |
| Transcript length (bp) | 489 |
| Coding sequence length (bp) | 489 |
| Protein length (aa) | 163 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1049 | 0.049 | 0.979 | 0.0644 | 0.0728 | 0.0233 | 0.1767 | 0.16 | 0.1435 | 0.0064 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 23 | 0.999493 |
| Orthofinder run ID | 4 |
| Orthogroup | 7119 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps camponoti-rufipedis | Ophun1|3000 |
| Ophiocordyceps kimflemingae | Ophio5|8162 |
| Ophiocordyceps subramaniannii | Hirsu2|7660 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|7660 MIPGNLMLVCGWGLGLFAGTGLAVPSSELETRDEPLTAHLTFRAASSEETYTMAVLADGNPVKTGHETLAVGLVD APDYLAQTFCNFQMSGEASISSKIASDNVTQQVVIDPPQPILSVSCRGFCVGIYGACYGSDGQYVGPCCNGVCIA TRCRPWNIGHQG* |
| Coding | >Hirsu2|7660 ATGATTCCAGGCAACTTGATGCTGGTCTGCGGCTGGGGCCTCGGTCTCTTCGCCGGCACAGGGCTTGCCGTTCCC TCGAGCGAGCTGGAGACGCGCGACGAGCCGCTGACGGCACACCTCACCTTCCGCGCCGCCTCGTCCGAAGAAACG TATACGATGGCCGTTCTGGCCGACGGAAATCCCGTCAAGACAGGGCACGAAACGCTCGCCGTAGGCCTCGTCGAC GCGCCGGACTACTTGGCTCAAACCTTTTGCAACTTCCAGATGTCTGGCGAAGCCAGTATCTCGTCCAAGATAGCC AGCGATAACGTCACGCAGCAGGTCGTGATCGACCCGCCTCAGCCCATCTTGAGCGTCAGCTGCAGGGGCTTCTGC GTTGGCATCTACGGAGCATGCTACGGTTCGGACGGCCAGTACGTAGGGCCCTGCTGCAACGGGGTCTGCATCGCG ACGCGATGCCGCCCCTGGAACATCGGGCATCAGGGATAG |
| Transcript | >Hirsu2|7660 ATGATTCCAGGCAACTTGATGCTGGTCTGCGGCTGGGGCCTCGGTCTCTTCGCCGGCACAGGGCTTGCCGTTCCC TCGAGCGAGCTGGAGACGCGCGACGAGCCGCTGACGGCACACCTCACCTTCCGCGCCGCCTCGTCCGAAGAAACG TATACGATGGCCGTTCTGGCCGACGGAAATCCCGTCAAGACAGGGCACGAAACGCTCGCCGTAGGCCTCGTCGAC GCGCCGGACTACTTGGCTCAAACCTTTTGCAACTTCCAGATGTCTGGCGAAGCCAGTATCTCGTCCAAGATAGCC AGCGATAACGTCACGCAGCAGGTCGTGATCGACCCGCCTCAGCCCATCTTGAGCGTCAGCTGCAGGGGCTTCTGC GTTGGCATCTACGGAGCATGCTACGGTTCGGACGGCCAGTACGTAGGGCCCTGCTGCAACGGGGTCTGCATCGCG ACGCGATGCCGCCCCTGGAACATCGGGCATCAGGGATAG |
| Gene | >Hirsu2|7660 ATGATTCCAGGCAACTTGATGCTGGTCTGCGGCTGGGGCCTCGGTCTCTTCGCCGGCACAGGGCTTGCCGTTCCC TCGAGCGAGCTGGAGACGCGCGACGAGCCGCTGACGGCACACCTCACCTTCCGCGCCGCCTCGTCCGAAGAAACG TATACGATGGCCGTTCTGGCCGACGGAAATCCCGTCAAGACAGGTCAGTCTGCAGATCGGTCTTGTCCTCTTCAG AAACACTGGCCGGTTGCCCATGCGATAGTATGAAACTCGGCGAACTGACCCGGTCACGGACCCAGGGCACGAAAC GCTCGCCGTAGGCCTCGTCGACGCGCCGGACTACTTGGCTCAAACCTTTTGCAACTTCCAGATGTCTGGCGAAGC CAGTATCTCGTCCAAGATAGCCAGCGATAACGTCACGCAGCAGGTCGTGATCGACCCGCCTCAGCCCATCTTGAG CGTCAGCTGCAGGGGCTTCTGCGTTGGCATCTACGGTGCGTGTTTTTTTTTTCCTTGACCGGACTGCGGCTTCTG GCATCAGCTGGATCCCGGCTTTCGTCGAGAGGTTTCTGTGGCACGGCTGACATCAAGCCTCGACGGCTGGACCTC AGGAGCATGCTACGGTTCGGACGGCCAGTACGTAGGGCCCTGCTGCAACGGGGTCTGCATCGCGACGCGATGCCG CCCCTGGAACATCGGGCATCAGGGATAG |