Protein ID | Hirsu2|765 |
Gene name | |
Location | Contig_1157:5211..7489 |
Strand | + |
Gene length (bp) | 2278 |
Transcript length (bp) | 1959 |
Coding sequence length (bp) | 1959 |
Protein length (aa) | 653 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00498 | FHA | FHA domain | 6.2E-15 | 42 | 117 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q3URD3|SLMAP_MOUSE | Sarcolemmal membrane-associated protein OS=Mus musculus GN=Slmap PE=1 SV=2 | 23 | 132 | 5.0E-07 |
sp|Q28623|SLMAP_RABIT | Sarcolemmal membrane-associated protein OS=Oryctolagus cuniculus GN=SLMAP PE=1 SV=2 | 23 | 132 | 8.0E-07 |
sp|Q14BN4|SLMAP_HUMAN | Sarcolemmal membrane-associated protein OS=Homo sapiens GN=SLMAP PE=1 SV=1 | 25 | 132 | 9.0E-07 |
sp|P0C219|SLMAP_RAT | Sarcolemmal membrane-associated protein OS=Rattus norvegicus GN=Slmap PE=1 SV=1 | 25 | 120 | 2.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0003674 | molecular_function | No |
GO:0005488 | binding | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Nucleus | Nuclear localization signal | 0.1961 | 0.6751 | 0.0781 | 0.0574 | 0.3305 | 0.0042 | 0.1087 | 0.0457 | 0.0839 | 0.0674 |
Orthofinder run ID | 4 |
Orthogroup | 3861 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|765 MPRKPKSAHEVQVILSSLDRSLAQPFRDRYLLLTKDEPVVCIGRTSKRNEMLESAVDNAWIDSAVMSRDHARLKF KADQKVVMIEDIGSLHGTFHNGERLIKNEPQPLKQGDILKFGISVERSAQAFPPCIMQVALNFGTDMPPQDKPVV FRVPDDSDVDEDMAGDGDDDFSIRNTSQRLRAFGFRPDQTADRSHVVAIDLTSDEDVTMGTNVLRDEGAVNSKAD AHEHDDAKDDVMEVDGLGEPPVVAAEDPDGHKLPNPNAEAVDGPSGSSHQDIPVADPDEWADCSSVVPPAAHAEI RSYFFSSPLSCELSDDESYSPSEDADEAEDSGHESAFDLYLAPSSPAPSMPSPTCACTDGDEAGKTKSKLEDEVM TTGNADEPTDCCDPANIVATDATSEPERPSARAPPAAAPLPMLESHRGPGLDPVSLPSFGSSPLFAQEQSPESAA EVLGAKTGKFEYFSARVHNKRFANLASSESRQSAHAHADTATSALLASGSKFLHSPLREMERLPLPPSFELDETS AYQFELSKKEAAAAANRTCLPRRTHVAIDDLIDSHPAQQPRKDTASNKRKAQEISELVPEEKCASKPLSGPPVDS GRAKTDSVATAVAEAEGSRAVKRLRRAAEIFGYAALGGVAVMSALIATAPAL* |
Coding | >Hirsu2|765 ATGCCGCGGAAGCCAAAATCCGCCCACGAGGTGCAGGTCATCCTGTCCAGCCTCGACCGGTCCTTGGCACAGCCC TTCCGCGACCGCTACCTGCTCTTGACCAAGGATGAGCCCGTTGTCTGCATCGGCCGCACCAGCAAGCGAAACGAA ATGCTCGAGTCCGCCGTCGACAACGCTTGGATCGACTCGGCCGTCATGTCCCGTGACCACGCACGCCTCAAGTTC AAGGCCGACCAGAAGGTTGTCATGATAGAGGATATCGGATCCTTGCACGGCACCTTCCACAACGGCGAGCGCCTC ATCAAAAACGAGCCGCAGCCGCTCAAACAAGGCGATATTCTCAAGTTTGGCATCTCCGTCGAGCGAAGCGCCCAG GCCTTCCCGCCTTGCATCATGCAAGTCGCCCTCAACTTCGGCACCGACATGCCACCCCAAGACAAACCCGTCGTC TTCAGGGTCCCGGACGACAGCGACGTTGACGAGGACATGGCCGGCGACGGCGACGACGATTTCAGCATCCGAAAC ACTTCTCAGCGTCTCCGAGCATTCGGCTTCCGCCCTGACCAGACCGCGGACAGGTCCCACGTCGTGGCCATCGAC CTCACGTCCGATGAAGATGTCACCATGGGAACGAATGTGTTGAGGGACGAGGGGGCGGTAAACTCAAAAGCCGAC GCTCATGAGCATGATGACGCCAAGGACGACGTCATGGAGGTTGACGGGCTCGGCGAGCCGCCCGTCGTGGCCGCC GAGGATCCAGACGGCCACAAGCTGCCCAACCCCAACGCTGAGGCCGTGGATGGACCGAGCGGCAGCAGCCACCAA GATATCCCCGTTGCTGACCCGGACGAGTGGGCAGACTGCAGCTCGGTCGTCCCGCCCGCCGCCCACGCCGAAATC AGGTCCTACTTTTTTTCCTCTCCTCTCTCGTGCGAACTATCCGACGACGAATCGTATTCCCCCTCGGAGGACGCC GACGAGGCCGAGGACAGTGGCCACGAGAGTGCATTTGATCTTTATCTGGCTCCGTCAAGCCCGGCACCAAGCATG CCCAGCCCGACTTGCGCCTGCACCGACGGCGACGAAGCCGGAAAGACAAAGTCCAAGCTCGAAGATGAGGTGATG ACGACTGGGAACGCGGACGAGCCGACGGACTGCTGCGATCCCGCCAACATAGTGGCCACCGACGCGACGTCGGAG CCAGAGCGGCCCTCTGCACGGGCCCCTCCGGCTGCCGCTCCGCTACCGATGCTCGAAAGCCACCGAGGCCCGGGG TTGGACCCTGTCTCGCTCCCATCCTTCGGCAGCTCTCCTCTTTTTGCCCAGGAACAGAGCCCGGAGTCGGCAGCC GAGGTGTTGGGTGCGAAGACGGGCAAGTTTGAGTACTTCTCGGCCCGCGTCCACAACAAGCGTTTCGCCAACCTC GCATCGAGCGAGTCTCGCCAGTCGGCACACGCGCACGCGGATACCGCGACCAGCGCCCTGCTGGCTTCCGGCAGC AAGTTCCTGCACTCGCCCCTTCGGGAGATGGAAAGGCTGCCGTTGCCCCCGTCTTTCGAGCTGGATGAGACGTCG GCCTACCAGTTCGAGCTGAGCAAGAAGGAGGCGGCGGCGGCGGCGAATAGGACTTGCTTGCCCCGGCGAACGCAT GTCGCCATCGATGACCTGATCGACTCGCACCCCGCCCAGCAGCCGCGCAAGGACACGGCTTCCAACAAGCGCAAG GCGCAAGAGATTTCGGAGCTTGTGCCCGAGGAGAAGTGCGCCAGCAAGCCGCTATCGGGCCCCCCCGTCGACTCG GGGCGGGCCAAGACGGACAGTGTGGCGACTGCCGTTGCCGAGGCCGAGGGCTCACGCGCCGTAAAGCGCCTGCGC AGAGCGGCCGAGATTTTTGGGTACGCGGCGCTGGGAGGCGTGGCGGTCATGTCTGCACTAATTGCGACGGCGCCG GCCCTCTAA |
Transcript | >Hirsu2|765 ATGCCGCGGAAGCCAAAATCCGCCCACGAGGTGCAGGTCATCCTGTCCAGCCTCGACCGGTCCTTGGCACAGCCC TTCCGCGACCGCTACCTGCTCTTGACCAAGGATGAGCCCGTTGTCTGCATCGGCCGCACCAGCAAGCGAAACGAA ATGCTCGAGTCCGCCGTCGACAACGCTTGGATCGACTCGGCCGTCATGTCCCGTGACCACGCACGCCTCAAGTTC AAGGCCGACCAGAAGGTTGTCATGATAGAGGATATCGGATCCTTGCACGGCACCTTCCACAACGGCGAGCGCCTC ATCAAAAACGAGCCGCAGCCGCTCAAACAAGGCGATATTCTCAAGTTTGGCATCTCCGTCGAGCGAAGCGCCCAG GCCTTCCCGCCTTGCATCATGCAAGTCGCCCTCAACTTCGGCACCGACATGCCACCCCAAGACAAACCCGTCGTC TTCAGGGTCCCGGACGACAGCGACGTTGACGAGGACATGGCCGGCGACGGCGACGACGATTTCAGCATCCGAAAC ACTTCTCAGCGTCTCCGAGCATTCGGCTTCCGCCCTGACCAGACCGCGGACAGGTCCCACGTCGTGGCCATCGAC CTCACGTCCGATGAAGATGTCACCATGGGAACGAATGTGTTGAGGGACGAGGGGGCGGTAAACTCAAAAGCCGAC GCTCATGAGCATGATGACGCCAAGGACGACGTCATGGAGGTTGACGGGCTCGGCGAGCCGCCCGTCGTGGCCGCC GAGGATCCAGACGGCCACAAGCTGCCCAACCCCAACGCTGAGGCCGTGGATGGACCGAGCGGCAGCAGCCACCAA GATATCCCCGTTGCTGACCCGGACGAGTGGGCAGACTGCAGCTCGGTCGTCCCGCCCGCCGCCCACGCCGAAATC AGGTCCTACTTTTTTTCCTCTCCTCTCTCGTGCGAACTATCCGACGACGAATCGTATTCCCCCTCGGAGGACGCC GACGAGGCCGAGGACAGTGGCCACGAGAGTGCATTTGATCTTTATCTGGCTCCGTCAAGCCCGGCACCAAGCATG CCCAGCCCGACTTGCGCCTGCACCGACGGCGACGAAGCCGGAAAGACAAAGTCCAAGCTCGAAGATGAGGTGATG ACGACTGGGAACGCGGACGAGCCGACGGACTGCTGCGATCCCGCCAACATAGTGGCCACCGACGCGACGTCGGAG CCAGAGCGGCCCTCTGCACGGGCCCCTCCGGCTGCCGCTCCGCTACCGATGCTCGAAAGCCACCGAGGCCCGGGG TTGGACCCTGTCTCGCTCCCATCCTTCGGCAGCTCTCCTCTTTTTGCCCAGGAACAGAGCCCGGAGTCGGCAGCC GAGGTGTTGGGTGCGAAGACGGGCAAGTTTGAGTACTTCTCGGCCCGCGTCCACAACAAGCGTTTCGCCAACCTC GCATCGAGCGAGTCTCGCCAGTCGGCACACGCGCACGCGGATACCGCGACCAGCGCCCTGCTGGCTTCCGGCAGC AAGTTCCTGCACTCGCCCCTTCGGGAGATGGAAAGGCTGCCGTTGCCCCCGTCTTTCGAGCTGGATGAGACGTCG GCCTACCAGTTCGAGCTGAGCAAGAAGGAGGCGGCGGCGGCGGCGAATAGGACTTGCTTGCCCCGGCGAACGCAT GTCGCCATCGATGACCTGATCGACTCGCACCCCGCCCAGCAGCCGCGCAAGGACACGGCTTCCAACAAGCGCAAG GCGCAAGAGATTTCGGAGCTTGTGCCCGAGGAGAAGTGCGCCAGCAAGCCGCTATCGGGCCCCCCCGTCGACTCG GGGCGGGCCAAGACGGACAGTGTGGCGACTGCCGTTGCCGAGGCCGAGGGCTCACGCGCCGTAAAGCGCCTGCGC AGAGCGGCCGAGATTTTTGGGTACGCGGCGCTGGGAGGCGTGGCGGTCATGTCTGCACTAATTGCGACGGCGCCG GCCCTCTAA |
Gene | >Hirsu2|765 ATGCCGCGGAAGCCAAAATCCGCCCACGAGGGTAAGCGTGGCGCCACAGAGAGCCAGACTCGCCCCCCCCTCCCC GCTAACGTCGCCTCGCCTCCAGTGCAGGTCATCCTGTCCAGCCTCGACCGGTCCTTGGCACAGCCCTTCCGCGAC CGCTACCTGCTCTTGACCAAGGATGAGCCCGTTGTCTGCATCGGCCGCACCAGCAAGCGAAACGAAATGCTCGAG TCCGCCGTCGACAACGCTTGGATCGACTCGGCCGTCATGTCCCGTGACCACGCACGCCTCAAGTTCAAGGCCGAC CAGAAGGTAAGCCCCTCCGCACATCATCTGCCCTGCCTTGGCCGCCTCCTGCTCCGCCTCCTCTGCCACCCATCT ACCCATGCCGCCACCGCTACTGCCGCCACGGCCCAACTTGTGCCCTGACAGCTGCCAAACAGGTTGTCATGATAG AGGATATCGGATCCTTGCACGGCACCTTCCACAACGGCGAGCGCCTCATCAAAAACGAGCCGCAGCCGCTCAAAC AAGGCGATATTCTCAAGTTTGGCATCTCCGTCGAGCGAAGCGCCCAGGCCTTCCCGCCTTGCATCATGCAAGTCG CCCTCAACTTCGGCACCGACATGTATTGAAGCCACCGAAACCTTCACCCTACCCGTCATGGACGCTAACACTCGG GCAGGCCACCCCAAGACAAACCCGTCGTCTTCAGGGTCCCGGACGACAGCGACGTTGACGAGGACATGGCCGGCG ACGGCGACGACGATTTCAGCATCCGAAACACTTCTCAGCGTCTCCGAGCATTCGGCTTCCGCCCTGACCAGACCG CGGACAGGTCCCACGTCGTGGCCATCGACCTCACGTCCGATGAAGATGTCACCATGGGAACGAATGTGTTGAGGG ACGAGGGGGCGGTAAACTCAAAAGCCGACGCTCATGAGCATGATGACGCCAAGGACGACGTCATGGAGGTTGACG GGCTCGGCGAGCCGCCCGTCGTGGCCGCCGAGGATCCAGACGGCCACAAGCTGCCCAACCCCAACGCTGAGGCCG TGGATGGACCGAGCGGCAGCAGCCACCAAGATATCCCCGTTGCTGACCCGGACGAGTGGGCAGACTGCAGCTCGG TCGTCCCGCCCGCCGCCCACGCCGAAATCAGGTCCTACTTTTTTTCCTCTCCTCTCTCGTGCGAACTATCCGACG ACGAATCGTATTCCCCCTCGGAGGACGCCGACGAGGCCGAGGACAGTGGCCACGAGAGTGCATTTGATCTTTATC TGGGTATGTGCCGCGGTGATTCGCTTTTTTGCTTTGTTCGGGAACCTCGTGCTTACCTGCCGGTGCAGCTCCGTC AAGCCCGGCACCAAGCATGCCCAGCCCGACTTGCGCCTGCACCGACGGCGACGAAGCCGGAAAGACAAAGTCCAA GCTCGAAGATGAGGTGATGACGACTGGGAACGCGGACGAGCCGACGGACTGCTGCGATCCCGCCAACATAGTGGC CACCGACGCGACGTCGGAGCCAGAGCGGCCCTCTGCACGGGCCCCTCCGGCTGCCGCTCCGCTACCGATGCTCGA AAGCCACCGAGGCCCGGGGTTGGACCCTGTCTCGCTCCCATCCTTCGGCAGCTCTCCTCTTTTTGCCCAGGAACA GAGCCCGGAGTCGGCAGCCGAGGTGTTGGGTGCGAAGACGGGCAAGTTTGAGTACTTCTCGGCCCGCGTCCACAA CAAGCGTTTCGCCAACCTCGCATCGAGCGAGTCTCGCCAGTCGGCACACGCGCACGCGGATACCGCGACCAGCGC CCTGCTGGCTTCCGGCAGCAAGTTCCTGCACTCGCCCCTTCGGGAGATGGAAAGGCTGCCGTTGCCCCCGTCTTT CGAGCTGGATGAGACGTCGGCCTACCAGTTCGAGCTGAGCAAGAAGGAGGCGGCGGCGGCGGCGAATAGGACTTG CTTGCCCCGGCGAACGCATGTCGCCATCGATGACCTGATCGACTCGCACCCCGCCCAGCAGCCGCGCAAGGACAC GGCTTCCAACAAGCGCAAGGCGCAAGAGATTTCGGAGCTTGTGCCCGAGGAGAAGTGCGCCAGCAAGCCGCTATC GGGCCCCCCCGTCGACTCGGGGCGGGCCAAGACGGACAGTGTGGCGACTGCCGTTGCCGAGGCCGAGGGCTCACG CGCCGTAAAGCGCCTGCGCAGAGCGGCCGAGATTTTTGGGTACGCGGCGCTGGGAGGCGTGGCGGTCATGTCTGC ACTAATTGCGACGGCGCCGGCCCTCTAA |