Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|7641
Gene name
LocationContig_456:11267..11912
Strand+
Gene length (bp)645
Transcript length (bp)645
Coding sequence length (bp)645
Protein length (aa) 215

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.2512 0.162 0.6137 0.1691 0.0925 0.3656 0.4888 0.4331 0.33 0.0413

SignalP

SignalP signal predicted Location Score
Yes 1 - 51 0.851709

Transmembrane Domains

Domain # Start End Length
1 31 50 19

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup7683
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|7641 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|7641
MMMSTLFSSVQGSWPFASRVRCSTSFSKKDGNLLFFVLFFLLSFLSPLALCEDSGPGYVDHISHTFTAHSPLVDF
IDPVRSKACPEATESRRPNFGFSRLLQSTSLISSDWAYNNNVRSLAAVERIGKLTNKAADNFYGHCGGRLLIIRV
VHGNATLNRIRYLRNWEELDDYSANDKNAPCIESGLPQGARCRYRVETVASWTHDPEFYETEFF*
Coding >Hirsu2|7641
ATGATGATGTCAACGCTCTTTTCGTCCGTCCAGGGATCTTGGCCTTTCGCCAGTCGAGTACGCTGCTCGACGAGT
TTCTCGAAAAAGGATGGAAACCTACTCTTCTTCGTTCTGTTCTTTCTTTTGAGTTTTCTCAGTCCTCTGGCCCTG
TGTGAGGACTCCGGCCCTGGTTACGTCGATCACATCTCCCACACCTTCACTGCCCATTCCCCCCTTGTCGATTTC
ATAGATCCTGTCAGATCCAAGGCGTGCCCTGAGGCAACTGAAAGTCGGCGGCCCAACTTTGGATTTTCCCGACTC
CTTCAGTCTACCTCGCTCATCTCTTCTGACTGGGCCTACAATAATAACGTGAGGTCACTTGCGGCCGTCGAAAGG
ATCGGGAAATTGACAAACAAAGCGGCCGACAATTTCTACGGCCATTGCGGTGGCCGGTTATTAATTATCCGTGTT
GTTCATGGCAACGCTACTTTAAACAGGATTCGCTATTTGAGAAATTGGGAGGAGCTGGACGACTACAGCGCTAAC
GACAAAAACGCTCCCTGCATCGAATCCGGCTTGCCTCAGGGAGCACGCTGTCGCTACCGTGTCGAGACCGTGGCA
TCCTGGACACACGATCCCGAATTCTATGAAACAGAATTCTTTTAG
Transcript >Hirsu2|7641
ATGATGATGTCAACGCTCTTTTCGTCCGTCCAGGGATCTTGGCCTTTCGCCAGTCGAGTACGCTGCTCGACGAGT
TTCTCGAAAAAGGATGGAAACCTACTCTTCTTCGTTCTGTTCTTTCTTTTGAGTTTTCTCAGTCCTCTGGCCCTG
TGTGAGGACTCCGGCCCTGGTTACGTCGATCACATCTCCCACACCTTCACTGCCCATTCCCCCCTTGTCGATTTC
ATAGATCCTGTCAGATCCAAGGCGTGCCCTGAGGCAACTGAAAGTCGGCGGCCCAACTTTGGATTTTCCCGACTC
CTTCAGTCTACCTCGCTCATCTCTTCTGACTGGGCCTACAATAATAACGTGAGGTCACTTGCGGCCGTCGAAAGG
ATCGGGAAATTGACAAACAAAGCGGCCGACAATTTCTACGGCCATTGCGGTGGCCGGTTATTAATTATCCGTGTT
GTTCATGGCAACGCTACTTTAAACAGGATTCGCTATTTGAGAAATTGGGAGGAGCTGGACGACTACAGCGCTAAC
GACAAAAACGCTCCCTGCATCGAATCCGGCTTGCCTCAGGGAGCACGCTGTCGCTACCGTGTCGAGACCGTGGCA
TCCTGGACACACGATCCCGAATTCTATGAAACAGAATTCTTTTAG
Gene >Hirsu2|7641
ATGATGATGTCAACGCTCTTTTCGTCCGTCCAGGGATCTTGGCCTTTCGCCAGTCGAGTACGCTGCTCGACGAGT
TTCTCGAAAAAGGATGGAAACCTACTCTTCTTCGTTCTGTTCTTTCTTTTGAGTTTTCTCAGTCCTCTGGCCCTG
TGTGAGGACTCCGGCCCTGGTTACGTCGATCACATCTCCCACACCTTCACTGCCCATTCCCCCCTTGTCGATTTC
ATAGATCCTGTCAGATCCAAGGCGTGCCCTGAGGCAACTGAAAGTCGGCGGCCCAACTTTGGATTTTCCCGACTC
CTTCAGTCTACCTCGCTCATCTCTTCTGACTGGGCCTACAATAATAACGTGAGGTCACTTGCGGCCGTCGAAAGG
ATCGGGAAATTGACAAACAAAGCGGCCGACAATTTCTACGGCCATTGCGGTGGCCGGTTATTAATTATCCGTGTT
GTTCATGGCAACGCTACTTTAAACAGGATTCGCTATTTGAGAAATTGGGAGGAGCTGGACGACTACAGCGCTAAC
GACAAAAACGCTCCCTGCATCGAATCCGGCTTGCCTCAGGGAGCACGCTGTCGCTACCGTGTCGAGACCGTGGCA
TCCTGGACACACGATCCCGAATTCTATGAAACAGAATTCTTTTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail