Protein ID | Hirsu2|7641 |
Gene name | |
Location | Contig_456:11267..11912 |
Strand | + |
Gene length (bp) | 645 |
Transcript length (bp) | 645 |
Coding sequence length (bp) | 645 |
Protein length (aa) | 215 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.2512 | 0.162 | 0.6137 | 0.1691 | 0.0925 | 0.3656 | 0.4888 | 0.4331 | 0.33 | 0.0413 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 51 | 0.851709 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 31 | 50 | 19 |
Orthofinder run ID | 4 |
Orthogroup | 7683 |
Change Orthofinder run |
Species | Protein ID |
---|---|
Ophiocordyceps subramaniannii | Hirsu2|7641 (this protein) |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|7641 MMMSTLFSSVQGSWPFASRVRCSTSFSKKDGNLLFFVLFFLLSFLSPLALCEDSGPGYVDHISHTFTAHSPLVDF IDPVRSKACPEATESRRPNFGFSRLLQSTSLISSDWAYNNNVRSLAAVERIGKLTNKAADNFYGHCGGRLLIIRV VHGNATLNRIRYLRNWEELDDYSANDKNAPCIESGLPQGARCRYRVETVASWTHDPEFYETEFF* |
Coding | >Hirsu2|7641 ATGATGATGTCAACGCTCTTTTCGTCCGTCCAGGGATCTTGGCCTTTCGCCAGTCGAGTACGCTGCTCGACGAGT TTCTCGAAAAAGGATGGAAACCTACTCTTCTTCGTTCTGTTCTTTCTTTTGAGTTTTCTCAGTCCTCTGGCCCTG TGTGAGGACTCCGGCCCTGGTTACGTCGATCACATCTCCCACACCTTCACTGCCCATTCCCCCCTTGTCGATTTC ATAGATCCTGTCAGATCCAAGGCGTGCCCTGAGGCAACTGAAAGTCGGCGGCCCAACTTTGGATTTTCCCGACTC CTTCAGTCTACCTCGCTCATCTCTTCTGACTGGGCCTACAATAATAACGTGAGGTCACTTGCGGCCGTCGAAAGG ATCGGGAAATTGACAAACAAAGCGGCCGACAATTTCTACGGCCATTGCGGTGGCCGGTTATTAATTATCCGTGTT GTTCATGGCAACGCTACTTTAAACAGGATTCGCTATTTGAGAAATTGGGAGGAGCTGGACGACTACAGCGCTAAC GACAAAAACGCTCCCTGCATCGAATCCGGCTTGCCTCAGGGAGCACGCTGTCGCTACCGTGTCGAGACCGTGGCA TCCTGGACACACGATCCCGAATTCTATGAAACAGAATTCTTTTAG |
Transcript | >Hirsu2|7641 ATGATGATGTCAACGCTCTTTTCGTCCGTCCAGGGATCTTGGCCTTTCGCCAGTCGAGTACGCTGCTCGACGAGT TTCTCGAAAAAGGATGGAAACCTACTCTTCTTCGTTCTGTTCTTTCTTTTGAGTTTTCTCAGTCCTCTGGCCCTG TGTGAGGACTCCGGCCCTGGTTACGTCGATCACATCTCCCACACCTTCACTGCCCATTCCCCCCTTGTCGATTTC ATAGATCCTGTCAGATCCAAGGCGTGCCCTGAGGCAACTGAAAGTCGGCGGCCCAACTTTGGATTTTCCCGACTC CTTCAGTCTACCTCGCTCATCTCTTCTGACTGGGCCTACAATAATAACGTGAGGTCACTTGCGGCCGTCGAAAGG ATCGGGAAATTGACAAACAAAGCGGCCGACAATTTCTACGGCCATTGCGGTGGCCGGTTATTAATTATCCGTGTT GTTCATGGCAACGCTACTTTAAACAGGATTCGCTATTTGAGAAATTGGGAGGAGCTGGACGACTACAGCGCTAAC GACAAAAACGCTCCCTGCATCGAATCCGGCTTGCCTCAGGGAGCACGCTGTCGCTACCGTGTCGAGACCGTGGCA TCCTGGACACACGATCCCGAATTCTATGAAACAGAATTCTTTTAG |
Gene | >Hirsu2|7641 ATGATGATGTCAACGCTCTTTTCGTCCGTCCAGGGATCTTGGCCTTTCGCCAGTCGAGTACGCTGCTCGACGAGT TTCTCGAAAAAGGATGGAAACCTACTCTTCTTCGTTCTGTTCTTTCTTTTGAGTTTTCTCAGTCCTCTGGCCCTG TGTGAGGACTCCGGCCCTGGTTACGTCGATCACATCTCCCACACCTTCACTGCCCATTCCCCCCTTGTCGATTTC ATAGATCCTGTCAGATCCAAGGCGTGCCCTGAGGCAACTGAAAGTCGGCGGCCCAACTTTGGATTTTCCCGACTC CTTCAGTCTACCTCGCTCATCTCTTCTGACTGGGCCTACAATAATAACGTGAGGTCACTTGCGGCCGTCGAAAGG ATCGGGAAATTGACAAACAAAGCGGCCGACAATTTCTACGGCCATTGCGGTGGCCGGTTATTAATTATCCGTGTT GTTCATGGCAACGCTACTTTAAACAGGATTCGCTATTTGAGAAATTGGGAGGAGCTGGACGACTACAGCGCTAAC GACAAAAACGCTCCCTGCATCGAATCCGGCTTGCCTCAGGGAGCACGCTGTCGCTACCGTGTCGAGACCGTGGCA TCCTGGACACACGATCCCGAATTCTATGAAACAGAATTCTTTTAG |