© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|7640 |
| Gene name | |
| Location | Contig_456:5056..5475 |
| Strand | - |
| Gene length (bp) | 419 |
| Transcript length (bp) | 354 |
| Coding sequence length (bp) | 354 |
| Protein length (aa) | 118 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.0614 | 0.0493 | 0.9673 | 0.0624 | 0.1024 | 0.0119 | 0.0571 | 0.0792 | 0.0434 | 0.0033 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 16 | 0.999622 |
| Orthofinder run ID | 4 |
| Orthogroup | 7682 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|7640 (this protein) |
| Ophiocordyceps subramaniannii | Hirsu2|7879 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|7640 MRSATIVTLCVGLATAAVTKTARDAPAPQTSQHPGVSEKYWCEKAGKPPGCSADRVEYCYWDQVRLRMLQAENEG KEDLFGHEKLDVWNHPNGMINCLTGNEVVPAGERGKGEESEG* |
| Coding | >Hirsu2|7640 ATGCGTTCCGCTACGATCGTCACTCTTTGCGTTGGCCTGGCCACGGCTGCAGTCACAAAGACTGCGCGCGACGCC CCAGCCCCCCAAACATCACAACATCCGGGAGTTTCTGAGAAATACTGGTGCGAAAAGGCTGGCAAACCGCCAGGC TGCTCGGCCGACCGAGTCGAGTATTGCTACTGGGATCAGGTCCGCCTGCGGATGTTGCAAGCCGAGAACGAAGGA AAGGAGGATTTATTTGGGCACGAGAAGCTTGACGTCTGGAATCACCCGAATGGCATGATCAACTGTCTCACTGGA AACGAAGTCGTGCCTGCTGGGGAAAGGGGAAAGGGCGAGGAAAGCGAGGGCTAG |
| Transcript | >Hirsu2|7640 ATGCGTTCCGCTACGATCGTCACTCTTTGCGTTGGCCTGGCCACGGCTGCAGTCACAAAGACTGCGCGCGACGCC CCAGCCCCCCAAACATCACAACATCCGGGAGTTTCTGAGAAATACTGGTGCGAAAAGGCTGGCAAACCGCCAGGC TGCTCGGCCGACCGAGTCGAGTATTGCTACTGGGATCAGGTCCGCCTGCGGATGTTGCAAGCCGAGAACGAAGGA AAGGAGGATTTATTTGGGCACGAGAAGCTTGACGTCTGGAATCACCCGAATGGCATGATCAACTGTCTCACTGGA AACGAAGTCGTGCCTGCTGGGGAAAGGGGAAAGGGCGAGGAAAGCGAGGGCTAG |
| Gene | >Hirsu2|7640 ATGCGTTCCGCTACGATCGTCACTCTTTGCGTTGGCCTGGCCACGGCTGCAGTCACAAAGACTGCGCGCGACGCC CCAGCCCCCCAAACATCACAACATCCGGGAGTTTCTGTAAGTCAAATAAACCTTATACGGCCCCTCCCCGTCGAG TGCTGTGCTAACACGCGCGTCTCCAGGAGAAATACTGGTGCGAAAAGGCTGGCAAACCGCCAGGCTGCTCGGCCG ACCGAGTCGAGTATTGCTACTGGGATCAGGTCCGCCTGCGGATGTTGCAAGCCGAGAACGAAGGAAAGGAGGATT TATTTGGGCACGAGAAGCTTGACGTCTGGAATCACCCGAATGGCATGATCAACTGTCTCACTGGAAACGAAGTCG TGCCTGCTGGGGAAAGGGGAAAGGGCGAGGAAAGCGAGGGCTAG |