© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|7621 |
| Gene name | |
| Location | Contig_452:14777..15320 |
| Strand | - |
| Gene length (bp) | 543 |
| Transcript length (bp) | 543 |
| Coding sequence length (bp) | 543 |
| Protein length (aa) | 181 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Peroxisome | 0.5609 | 0.3888 | 0.4733 | 0.2601 | 0.3142 | 0.0314 | 0.5936 | 0.2199 | 0.2477 | 0.8141 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 83 | 105 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 10415 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|7621 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|7621 MHVIQLMERGPDELRAKIDETVGVTGWTDTLAQHILQALQMTLMEGRERMGPALTHCYDNAVGAAQQEFDHLCRL AKDHPGQTVAAVFLTILALGVLVELLLLVVELLGFGELGPVEGRQSGLSVPFQELIDRLRFFCVMVGVDVPGLHT PGLALLLLPEVGHDLGSRLGDATSVLRFSS* |
| Coding | >Hirsu2|7621 ATGCATGTGATACAACTAATGGAGAGGGGTCCTGATGAGCTGAGAGCGAAGATTGATGAGACCGTTGGTGTGACC GGTTGGACCGATACACTCGCCCAGCACATCCTGCAGGCATTGCAAATGACACTGATGGAAGGCCGCGAGAGGATG GGCCCAGCTTTGACTCATTGCTACGATAATGCAGTAGGCGCGGCACAGCAAGAGTTCGACCACCTGTGCAGGCTG GCGAAGGACCACCCCGGACAAACGGTCGCAGCCGTGTTTCTTACGATTCTCGCTCTTGGTGTGTTAGTGGAATTG TTGCTACTTGTCGTCGAGCTGCTTGGATTCGGCGAACTTGGACCGGTAGAAGGTAGACAGTCTGGCCTCTCAGTC CCCTTTCAAGAGCTTATTGATCGCCTAAGGTTCTTTTGCGTCATGGTGGGAGTCGATGTACCGGGGCTACATACC CCGGGGCTCGCTCTTCTCCTTCTTCCAGAGGTTGGGCATGACTTGGGATCACGCCTAGGCGACGCGACGTCCGTA TTGCGGTTCTCGAGTTAG |
| Transcript | >Hirsu2|7621 ATGCATGTGATACAACTAATGGAGAGGGGTCCTGATGAGCTGAGAGCGAAGATTGATGAGACCGTTGGTGTGACC GGTTGGACCGATACACTCGCCCAGCACATCCTGCAGGCATTGCAAATGACACTGATGGAAGGCCGCGAGAGGATG GGCCCAGCTTTGACTCATTGCTACGATAATGCAGTAGGCGCGGCACAGCAAGAGTTCGACCACCTGTGCAGGCTG GCGAAGGACCACCCCGGACAAACGGTCGCAGCCGTGTTTCTTACGATTCTCGCTCTTGGTGTGTTAGTGGAATTG TTGCTACTTGTCGTCGAGCTGCTTGGATTCGGCGAACTTGGACCGGTAGAAGGTAGACAGTCTGGCCTCTCAGTC CCCTTTCAAGAGCTTATTGATCGCCTAAGGTTCTTTTGCGTCATGGTGGGAGTCGATGTACCGGGGCTACATACC CCGGGGCTCGCTCTTCTCCTTCTTCCAGAGGTTGGGCATGACTTGGGATCACGCCTAGGCGACGCGACGTCCGTA TTGCGGTTCTCGAGTTAG |
| Gene | >Hirsu2|7621 ATGCATGTGATACAACTAATGGAGAGGGGTCCTGATGAGCTGAGAGCGAAGATTGATGAGACCGTTGGTGTGACC GGTTGGACCGATACACTCGCCCAGCACATCCTGCAGGCATTGCAAATGACACTGATGGAAGGCCGCGAGAGGATG GGCCCAGCTTTGACTCATTGCTACGATAATGCAGTAGGCGCGGCACAGCAAGAGTTCGACCACCTGTGCAGGCTG GCGAAGGACCACCCCGGACAAACGGTCGCAGCCGTGTTTCTTACGATTCTCGCTCTTGGTGTGTTAGTGGAATTG TTGCTACTTGTCGTCGAGCTGCTTGGATTCGGCGAACTTGGACCGGTAGAAGGTAGACAGTCTGGCCTCTCAGTC CCCTTTCAAGAGCTTATTGATCGCCTAAGGTTCTTTTGCGTCATGGTGGGAGTCGATGTACCGGGGCTACATACC CCGGGGCTCGCTCTTCTCCTTCTTCCAGAGGTTGGGCATGACTTGGGATCACGCCTAGGCGACGCGACGTCCGTA TTGCGGTTCTCGAGTTAG |